RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 J3QL48 77 aa6.56□□□□□ -1.36
GGA3-213ENST00000582486 PLA2G1BP04054 148 aaKnown RBP6.56□□□□□ -1.36
GGA3-213ENST00000582486 Q96NJ1 140 aa6.56□□□□□ -1.36
GGA3-213ENST00000582486 C1orf195Q5TG92 126 aa6.56□□□□□ -1.36
GGA3-213ENST00000582486 HSPG2P98160 4391 aa6.54□□□□□ -1.36
GGA3-213ENST00000582486 KRTAP10-4P60372 401 aaPredicted RBP6.54□□□□□ -1.36
GGA3-213ENST00000582486 CD164Q04900 197 aa6.54□□□□□ -1.36
GGA3-213ENST00000582486 A8MWP4 228 aa6.53□□□□□ -1.36
GGA3-213ENST00000582486 PRR15Q8IV56 129 aa6.52□□□□□ -1.37
GGA3-213ENST00000582486 RYR1P21817 5038 aa6.51□□□□□ -1.37
GGA3-213ENST00000582486 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
GGA3-213ENST00000582486 TYMSOSQ8TAI1 123 aa6.5□□□□□ -1.37
GGA3-213ENST00000582486 WFDC13Q8IUB5 93 aa6.49□□□□□ -1.37
GGA3-213ENST00000582486 NDUFB1O75438 58 aa6.49□□□□□ -1.37
GGA3-213ENST00000582486 EPPK1P58107 5090 aaKnown RBP6.48□□□□□ -1.37
GGA3-213ENST00000582486 PKHD1L1Q86WI1 4243 aa6.46□□□□□ -1.37
GGA3-213ENST00000582486 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
GGA3-213ENST00000582486 FAM229AH3BQW9 127 aa6.45□□□□□ -1.38
GGA3-213ENST00000582486 CDK2AP2O75956 126 aa6.45□□□□□ -1.38
GGA3-213ENST00000582486 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
GGA3-213ENST00000582486 ZCCHC13Q8WW36 166 aaKnown RBP6.45□□□□□ -1.38
GGA3-213ENST00000582486 CASC2Q6XLA1 102 aa6.45□□□□□ -1.38
GGA3-213ENST00000582486 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
GGA3-213ENST00000582486 IGHV6-1A0A0B4J1U7 121 aa6.44□□□□□ -1.38
GGA3-213ENST00000582486 MMP24-AS1A0A0U1RRL7 71 aa6.44□□□□□ -1.38
GGA3-213ENST00000582486 A0A1B0GVX0 72 aa6.44□□□□□ -1.38
GGA3-213ENST00000582486 MPLKIPQ8TAP9 179 aa6.44□□□□□ -1.38
GGA3-213ENST00000582486 hDV103S1A0JD37 113 aa6.43□□□□□ -1.38
GGA3-213ENST00000582486 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
GGA3-213ENST00000582486 C8orf17Q9NRJ1 99 aa6.42□□□□□ -1.38
GGA3-213ENST00000582486 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
GGA3-213ENST00000582486 SPINK1P00995 79 aa6.42□□□□□ -1.38
GGA3-213ENST00000582486 Q5VSD8 79 aa6.42□□□□□ -1.38
GGA3-213ENST00000582486 LIMD2Q9BT23 127 aa6.42□□□□□ -1.38
GGA3-213ENST00000582486 NOTCH2NLQ7Z3S9 236 aa6.41□□□□□ -1.38
GGA3-213ENST00000582486 LINC00304Q8N9R0 145 aa6.41□□□□□ -1.38
GGA3-213ENST00000582486 C1orf64Q8NEQ6 169 aa6.39□□□□□ -1.39
GGA3-213ENST00000582486 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
GGA3-213ENST00000582486 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
GGA3-213ENST00000582486 TNXBP22105 4242 aa6.38□□□□□ -1.39
GGA3-213ENST00000582486 Q1T7F1 81 aa6.37□□□□□ -1.39
GGA3-213ENST00000582486 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
GGA3-213ENST00000582486 PMAIP1Q13794 54 aa6.36□□□□□ -1.39
GGA3-213ENST00000582486 FAT3Q8TDW7 4589 aa6.35□□□□□ -1.39
GGA3-213ENST00000582486 RPS29P62273 56 aaKnown RBP6.35□□□□□ -1.39
GGA3-213ENST00000582486 MRPL34Q9BQ48 92 aaKnown RBP6.34□□□□□ -1.39
GGA3-213ENST00000582486 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
GGA3-213ENST00000582486 NDUFS5O43920 106 aa6.32□□□□□ -1.4
GGA3-213ENST00000582486 LINC00313P59037 77 aa6.32□□□□□ -1.4
GGA3-213ENST00000582486 MP68P56378 58 aa6.32□□□□□ -1.4
GGA3-213ENST00000582486 MYCBP2O75592 4640 aa6.31□□□□□ -1.4
GGA3-213ENST00000582486 TRAV22A0A0B4J277 110 aa6.31□□□□□ -1.4
GGA3-213ENST00000582486 Q8N1X5 172 aa6.3□□□□□ -1.4
GGA3-213ENST00000582486 PRR4Q16378 134 aa6.3□□□□□ -1.4
GGA3-213ENST00000582486 TP53AIP1Q9HCN2 124 aa6.3□□□□□ -1.4
GGA3-213ENST00000582486 FLG2Q5D862 2391 aaPredicted RBP6.29□□□□□ -1.4
GGA3-213ENST00000582486 H0Y9P7 68 aa6.29□□□□□ -1.4
GGA3-213ENST00000582486 H3BPC8 53 aa6.28□□□□□ -1.4
GGA3-213ENST00000582486 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
GGA3-213ENST00000582486 LINC00208Q96KT6 92 aa6.28□□□□□ -1.4
GGA3-213ENST00000582486 SPANXA2-OT1Q8N9U9 137 aa6.27□□□□□ -1.41
GGA3-213ENST00000582486 PSPHP1O15172 72 aa6.26□□□□□ -1.41
GGA3-213ENST00000582486 KRTAP16-1A8MUX0 517 aa6.25□□□□□ -1.41
GGA3-213ENST00000582486 RETNLBQ9BQ08 111 aa6.25□□□□□ -1.41
GGA3-213ENST00000582486 Q8N9P0 234 aaPredicted RBP6.24□□□□□ -1.41
GGA3-213ENST00000582486 Q5W150 140 aa6.22□□□□□ -1.41
GGA3-213ENST00000582486 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
GGA3-213ENST00000582486 A8MUN3 132 aa6.21□□□□□ -1.41
GGA3-213ENST00000582486 Q5VV11 94 aa6.2□□□□□ -1.42
GGA3-213ENST00000582486 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
GGA3-213ENST00000582486 Q75L30 129 aa6.19□□□□□ -1.42
GGA3-213ENST00000582486 C9orf92A6NGG3 77 aa6.19□□□□□ -1.42
GGA3-213ENST00000582486 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
GGA3-213ENST00000582486 KRTAP4-5Q9BYR2 181 aa6.19□□□□□ -1.42
GGA3-213ENST00000582486 RBM12B-AS1Q9P1G2 102 aa6.17□□□□□ -1.42
GGA3-213ENST00000582486 BIRC6Q9NR09 4857 aa6.16□□□□□ -1.42
GGA3-213ENST00000582486 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
GGA3-213ENST00000582486 PCOTHQ58A44 107 aa6.14□□□□□ -1.43
GGA3-213ENST00000582486 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
GGA3-213ENST00000582486 LOC101927531A0A1B0GV80 90 aa6.13□□□□□ -1.43
GGA3-213ENST00000582486 COA5Q86WW8 74 aa6.13□□□□□ -1.43
GGA3-213ENST00000582486 CHKB-CPT1BH3BT56 60 aa6.12□□□□□ -1.43
GGA3-213ENST00000582486 A8MU10 97 aa6.11□□□□□ -1.43
GGA3-213ENST00000582486 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
GGA3-213ENST00000582486 HERC2O95714 4834 aa6.11□□□□□ -1.43
GGA3-213ENST00000582486 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
GGA3-213ENST00000582486 A8MUU9 505 aa6.09□□□□□ -1.43
GGA3-213ENST00000582486 IGKV2-30P06310 120 aa6.08□□□□□ -1.44
GGA3-213ENST00000582486 IGKV2D-30A0A075B6S6 120 aa6.05□□□□□ -1.44
GGA3-213ENST00000582486 LCA10Q71F78 164 aa6.05□□□□□ -1.44
GGA3-213ENST00000582486 LINC01558Q9Y6Z2 57 aa6.05□□□□□ -1.44
GGA3-213ENST00000582486 ATP11AUNQ6ZP68 121 aa6.04□□□□□ -1.44
GGA3-213ENST00000582486 A6NED7 52 aa6.03□□□□□ -1.44
GGA3-213ENST00000582486 HRES1P13985 223 aa6.02□□□□□ -1.45
GGA3-213ENST00000582486 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
GGA3-213ENST00000582486 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
GGA3-213ENST00000582486 C7orf65Q6ZTY9 151 aa5.99□□□□□ -1.45
GGA3-213ENST00000582486 KTN1-AS1Q86SY8 53 aa5.99□□□□□ -1.45
GGA3-213ENST00000582486 XP32Q5T750 250 aa5.98□□□□□ -1.45
GGA3-213ENST00000582486 LPAP08519 4548 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms