RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 A0A1B0GW54 56 aa11.31□□□□□ -0.6
SNX11-207ENST00000580875 Q6Q795 121 aa11.31□□□□□ -0.6
SNX11-207ENST00000580875 MT1HP80294 61 aa11.3□□□□□ -0.6
SNX11-207ENST00000580875 CD164Q04900 197 aa11.27□□□□□ -0.61
SNX11-207ENST00000580875 LINC00846Q9NV44 126 aa11.26□□□□□ -0.61
SNX11-207ENST00000580875 TRBV7-7A0A0K0K1E9 115 aa11.24□□□□□ -0.61
SNX11-207ENST00000580875 A0A087WSZ3 146 aa11.23□□□□□ -0.61
SNX11-207ENST00000580875 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
SNX11-207ENST00000580875 Q5XG85 94 aa11.2□□□□□ -0.62
SNX11-207ENST00000580875 SS18L2Q9UHA2 77 aa11.19□□□□□ -0.62
SNX11-207ENST00000580875 Q6ZVQ6 151 aa11.18□□□□□ -0.62
SNX11-207ENST00000580875 NREPQ16612 68 aa11.17□□□□□ -0.62
SNX11-207ENST00000580875 C1orf195Q5TG92 126 aa11.16□□□□□ -0.62
SNX11-207ENST00000580875 LORP23490 312 aaPredicted RBP11.15□□□□□ -0.62
SNX11-207ENST00000580875 KRTAP10-6P60371 365 aaPredicted RBP11.13□□□□□ -0.63
SNX11-207ENST00000580875 LINC00643Q86TS7 51 aa11.13□□□□□ -0.63
SNX11-207ENST00000580875 RPL37P61927 97 aaKnown RBP11.12□□□□□ -0.63
SNX11-207ENST00000580875 ATP5EP2Q5VTU8 51 aa11.09□□□□□ -0.63
SNX11-207ENST00000580875 M0R2T5 61 aa11.08□□□□□ -0.64
SNX11-207ENST00000580875 COX6B2Q6YFQ2 88 aa11.06□□□□□ -0.64
SNX11-207ENST00000580875 BPY2O14599 106 aa11.05□□□□□ -0.64
SNX11-207ENST00000580875 CXCL6P80162 114 aa11.04□□□□□ -0.64
SNX11-207ENST00000580875 SIGMAR1Q99720 223 aa11.04□□□□□ -0.64
SNX11-207ENST00000580875 IGKV3D-7A0A0C4DH55 119 aa11.03□□□□□ -0.64
SNX11-207ENST00000580875 LINC00472Q9H8W2 130 aa11.03□□□□□ -0.64
SNX11-207ENST00000580875 J3KT08 172 aa11.01□□□□□ -0.65
SNX11-207ENST00000580875 Q96NJ1 140 aa11.01□□□□□ -0.65
SNX11-207ENST00000580875 MT-ATP8P03928 68 aa11□□□□□ -0.65
SNX11-207ENST00000580875 DEFB116Q30KQ4 102 aa11□□□□□ -0.65
SNX11-207ENST00000580875 IGKV4-1P06312 121 aa10.97□□□□□ -0.65
SNX11-207ENST00000580875 DSCR10P59022 87 aa10.94□□□□□ -0.66
SNX11-207ENST00000580875 A8MWP4 228 aa10.92□□□□□ -0.66
SNX11-207ENST00000580875 IMUPQ9GZP8 106 aa10.92□□□□□ -0.66
SNX11-207ENST00000580875 HIST1H4AP62805 103 aaKnown RBP10.91□□□□□ -0.66
SNX11-207ENST00000580875 FLGP20930 4061 aaPredicted RBP10.91□□□□□ -0.66
SNX11-207ENST00000580875 NDUFB1O75438 58 aa10.9□□□□□ -0.66
SNX11-207ENST00000580875 K7EQZ3 153 aa10.89□□□□□ -0.67
SNX11-207ENST00000580875 Q8N9L7 120 aa10.89□□□□□ -0.67
SNX11-207ENST00000580875 ATP11AUNQ6ZP68 121 aa10.86□□□□□ -0.67
SNX11-207ENST00000580875 PRR15Q8IV56 129 aa10.86□□□□□ -0.67
SNX11-207ENST00000580875 Q75L30 129 aa10.85□□□□□ -0.67
SNX11-207ENST00000580875 A0A1B0GVX0 72 aa10.84□□□□□ -0.67
SNX11-207ENST00000580875 A0A087WVE0 104 aa10.82□□□□□ -0.68
SNX11-207ENST00000580875 IGHV6-1A0A0B4J1U7 121 aa10.81□□□□□ -0.68
SNX11-207ENST00000580875 C8orf87E5RJ46 101 aa10.77□□□□□ -0.69
SNX11-207ENST00000580875 HCG22E2RYF7 251 aa10.76□□□□□ -0.69
SNX11-207ENST00000580875 C8orf17Q9NRJ1 99 aa10.76□□□□□ -0.69
SNX11-207ENST00000580875 MMP24-AS1A0A0U1RRL7 71 aa10.74□□□□□ -0.69
SNX11-207ENST00000580875 FAM236AA0A1B0GUQ0 79 aa10.73□□□□□ -0.69
SNX11-207ENST00000580875 FAM236BA0A1B0GV22 79 aa10.73□□□□□ -0.69
SNX11-207ENST00000580875 CASC2Q6XLA1 102 aa10.71□□□□□ -0.69
SNX11-207ENST00000580875 WFDC13Q8IUB5 93 aa10.71□□□□□ -0.69
SNX11-207ENST00000580875 LINC00313P59037 77 aa10.7□□□□□ -0.7
SNX11-207ENST00000580875 hDV103S1A0JD37 113 aa10.69□□□□□ -0.7
SNX11-207ENST00000580875 SCGB1A1P11684 91 aa10.69□□□□□ -0.7
SNX11-207ENST00000580875 NOTCH2NLQ7Z3S9 236 aa10.67□□□□□ -0.7
SNX11-207ENST00000580875 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
SNX11-207ENST00000580875 TMEM254Q8TBM7 123 aa10.66□□□□□ -0.7
SNX11-207ENST00000580875 A8MUU9 505 aa10.63□□□□□ -0.71
SNX11-207ENST00000580875 KRTAP9-8Q9BYQ0 159 aa10.63□□□□□ -0.71
SNX11-207ENST00000580875 ATOX1O00244 68 aa10.62□□□□□ -0.71
SNX11-207ENST00000580875 MRPL34Q9BQ48 92 aaKnown RBP10.62□□□□□ -0.71
SNX11-207ENST00000580875 KRTAP16-1A8MUX0 517 aa10.58□□□□□ -0.72
SNX11-207ENST00000580875 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.58□□□□□ -0.72
SNX11-207ENST00000580875 NDUFS5O43920 106 aa10.55□□□□□ -0.72
SNX11-207ENST00000580875 SMIM20Q8N5G0 67 aa10.55□□□□□ -0.72
SNX11-207ENST00000580875 KRTAP9-7A8MTY7 169 aa10.54□□□□□ -0.72
SNX11-207ENST00000580875 USH2AO75445 5202 aa10.52□□□□□ -0.73
SNX11-207ENST00000580875 Q8N9P0 234 aaPredicted RBP10.51□□□□□ -0.73
SNX11-207ENST00000580875 OCR1Q9BZK8 76 aa10.5□□□□□ -0.73
SNX11-207ENST00000580875 SSPOA2VEC9 5147 aa10.49□□□□□ -0.73
SNX11-207ENST00000580875 ANAPC13Q9BS18 74 aa10.49□□□□□ -0.73
SNX11-207ENST00000580875 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
SNX11-207ENST00000580875 TRAV7A0A075B6U4 112 aa10.48□□□□□ -0.73
SNX11-207ENST00000580875 FAM236DA0A1B0GTK5 79 aa10.45□□□□□ -0.74
SNX11-207ENST00000580875 UQCRQO14949 82 aa10.45□□□□□ -0.74
SNX11-207ENST00000580875 FAM236CP0DP71 79 aa10.45□□□□□ -0.74
SNX11-207ENST00000580875 SERP2Q8N6R1 65 aa10.45□□□□□ -0.74
SNX11-207ENST00000580875 MT2AP02795 61 aa10.44□□□□□ -0.74
SNX11-207ENST00000580875 RBM12B-AS1Q9P1G2 102 aa10.39□□□□□ -0.75
SNX11-207ENST00000580875 TRAV22A0A0B4J277 110 aa10.37□□□□□ -0.75
SNX11-207ENST00000580875 MT1FP04733 61 aa10.37□□□□□ -0.75
SNX11-207ENST00000580875 COX7CP15954 63 aa10.37□□□□□ -0.75
SNX11-207ENST00000580875 MPLKIPQ8TAP9 179 aa10.37□□□□□ -0.75
SNX11-207ENST00000580875 HRES1P13985 223 aa10.36□□□□□ -0.75
SNX11-207ENST00000580875 H0Y9P7 68 aa10.35□□□□□ -0.75
SNX11-207ENST00000580875 C5orf47Q569G3 176 aa10.35□□□□□ -0.75
SNX11-207ENST00000580875 MP68P56378 58 aa10.34□□□□□ -0.75
SNX11-207ENST00000580875 ZCCHC13Q8WW36 166 aaKnown RBP10.34□□□□□ -0.75
SNX11-207ENST00000580875 LCE2BO14633 110 aa10.33□□□□□ -0.76
SNX11-207ENST00000580875 KRTAP10-10P60014 251 aa10.32□□□□□ -0.76
SNX11-207ENST00000580875 Q5W150 140 aa10.31□□□□□ -0.76
SNX11-207ENST00000580875 KRTAP19-1Q8IUB9 90 aa10.31□□□□□ -0.76
SNX11-207ENST00000580875 KRTAP9-3Q9BYQ3 159 aa10.31□□□□□ -0.76
SNX11-207ENST00000580875 FCGBPQ9Y6R7 5405 aaPredicted RBP10.3□□□□□ -0.76
SNX11-207ENST00000580875 H3BPC8 53 aa10.28□□□□□ -0.76
SNX11-207ENST00000580875 PCP4P48539 62 aa10.27□□□□□ -0.77
SNX11-207ENST00000580875 C20orf197Q8N268 126 aa10.26□□□□□ -0.77
SNX11-207ENST00000580875 LINC00208Q96KT6 92 aa10.24□□□□□ -0.77
SNX11-207ENST00000580875 CCDC179H3BU77 68 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms