RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 FAM223BA6NKX1 122 aa1.34□□□□□ -2.19
KPNB1-208ENST00000580019 MRPL33O75394 65 aaKnown RBP1.34□□□□□ -2.19
KPNB1-208ENST00000580019 ACYP1P07311 99 aa1.34□□□□□ -2.19
KPNB1-208ENST00000580019 MGPP08493 103 aa1.34□□□□□ -2.19
KPNB1-208ENST00000580019 ACYP2P14621 99 aa1.34□□□□□ -2.19
KPNB1-208ENST00000580019 SPINK13Q1W4C9 94 aa1.34□□□□□ -2.19
KPNB1-208ENST00000580019 Q96NJ1 140 aa1.34□□□□□ -2.19
KPNB1-208ENST00000580019 TRGV1A0A0A0MS02 117 aa1.33□□□□□ -2.2
KPNB1-208ENST00000580019 A0A1B0GWA3 101 aa1.33□□□□□ -2.2
KPNB1-208ENST00000580019 F8WEM9 126 aa1.33□□□□□ -2.2
KPNB1-208ENST00000580019 H3BSH0 61 aa1.33□□□□□ -2.2
KPNB1-208ENST00000580019 SMR3BP02814 79 aaPredicted RBP1.33□□□□□ -2.2
KPNB1-208ENST00000580019 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
KPNB1-208ENST00000580019 PRB3Q04118 309 aaPredicted RBP1.33□□□□□ -2.2
KPNB1-208ENST00000580019 HMGN3Q15651 99 aa1.33□□□□□ -2.2
KPNB1-208ENST00000580019 NMSQ5H8A3 153 aa1.33□□□□□ -2.2
KPNB1-208ENST00000580019 LINC01600Q96MT4 127 aa1.33□□□□□ -2.2
KPNB1-208ENST00000580019 HMGN2P05204 90 aaKnown RBP1.32□□□□□ -2.2
KPNB1-208ENST00000580019 DEFB136Q30KP8 78 aa1.32□□□□□ -2.2
KPNB1-208ENST00000580019 LINC00643Q86TS7 51 aa1.32□□□□□ -2.2
KPNB1-208ENST00000580019 SMCO4Q9NRQ5 59 aa1.32□□□□□ -2.2
KPNB1-208ENST00000580019 LPAP08519 4548 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 ZNF137PP52743 207 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 WFDC2Q14508 124 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 BVES-AS1Q5T3Y7 98 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 CFAP126Q5VTH2 177 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 SMIM11BQ8TCY0 68 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 DEFB104AQ8WTQ1 72 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 PRR15LQ9BU68 103 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 APLNQ9ULZ1 77 aa1.31□□□□□ -2.2
KPNB1-208ENST00000580019 SMIM31A0A1B0GVY4 71 aa1.3□□□□□ -2.2
KPNB1-208ENST00000580019 C7orf77A4D0Y5 90 aa1.3□□□□□ -2.2
KPNB1-208ENST00000580019 ARMS2P0C7Q2 107 aa1.3□□□□□ -2.2
KPNB1-208ENST00000580019 IGLC2P0DOY2 106 aa1.3□□□□□ -2.2
KPNB1-208ENST00000580019 IGLC3P0DOY3 106 aa1.3□□□□□ -2.2
KPNB1-208ENST00000580019 HAMPP81172 84 aa1.3□□□□□ -2.2
KPNB1-208ENST00000580019 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
KPNB1-208ENST00000580019 SYNE2Q8WXH0 6885 aaKnown RBP1.29□□□□□ -2.2
KPNB1-208ENST00000580019 H3BUT2 72 aa1.29□□□□□ -2.2
KPNB1-208ENST00000580019 M0R3E3 92 aa1.29□□□□□ -2.2
KPNB1-208ENST00000580019 PDCD5O14737 125 aa1.29□□□□□ -2.2
KPNB1-208ENST00000580019 LEPROTL1O95214 131 aa1.29□□□□□ -2.2
KPNB1-208ENST00000580019 MUC17Q685J3 4493 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 MYMXA0A1B0GTQ4 84 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 D6R8Y8 96 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 FXYD6P3P58550 94 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 DEFA5Q01523 94 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 MUSTN1Q8IVN3 82 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 SPRR4Q96PI1 79 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 LINC00846Q9NV44 126 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 PSENENQ9NZ42 101 aa1.28□□□□□ -2.2
KPNB1-208ENST00000580019 A0A087WVE0 104 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 IQCF6A8MYZ5 107 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 IFI6P09912 130 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 GCHFRP30047 84 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 RPL37P61927 97 aaKnown RBP1.27□□□□□ -2.21
KPNB1-208ENST00000580019 PLGLAQ15195 96 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 KRTAP6-3Q3LI67 103 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 Q6ZRX8 168 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 KRTAP13-1Q8IUC0 172 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 UBE2DNLQ8IWF7 75 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 PLAC4Q8WY50 150 aa1.27□□□□□ -2.21
KPNB1-208ENST00000580019 GVQW2A0A096LPI5 108 aaPredicted RBP1.26□□□□□ -2.21
KPNB1-208ENST00000580019 M0R1W7 72 aa1.26□□□□□ -2.21
KPNB1-208ENST00000580019 CFDP00746 253 aaPredicted RBP1.26□□□□□ -2.21
KPNB1-208ENST00000580019 MT1HL1P0DM35 61 aa1.26□□□□□ -2.21
KPNB1-208ENST00000580019 C18orf32Q8TCD1 76 aa1.26□□□□□ -2.21
KPNB1-208ENST00000580019 TMEM263Q8WUH6 116 aaKnown RBP1.26□□□□□ -2.21
KPNB1-208ENST00000580019 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
KPNB1-208ENST00000580019 NEBP20929 6669 aa1.25□□□□□ -2.21
KPNB1-208ENST00000580019 CEBPZOSA8MTT3 80 aa1.25□□□□□ -2.21
KPNB1-208ENST00000580019 DEFB135Q30KP9 77 aa1.25□□□□□ -2.21
KPNB1-208ENST00000580019 H0Y9P7 68 aa1.24□□□□□ -2.21
KPNB1-208ENST00000580019 LINC00472Q9H8W2 130 aa1.24□□□□□ -2.21
KPNB1-208ENST00000580019 KAAG1Q9UBP8 84 aa1.24□□□□□ -2.21
KPNB1-208ENST00000580019 HILPDAQ9Y5L2 63 aa1.24□□□□□ -2.21
KPNB1-208ENST00000580019 G3V318 75 aa1.23□□□□□ -2.21
KPNB1-208ENST00000580019 DEFB4AO15263 64 aa1.23□□□□□ -2.21
KPNB1-208ENST00000580019 ANGP03950 147 aaKnown RBP1.23□□□□□ -2.21
KPNB1-208ENST00000580019 GNGT1P63211 74 aa1.23□□□□□ -2.21
KPNB1-208ENST00000580019 KRTAP20-1Q3LI63 56 aa1.23□□□□□ -2.21
KPNB1-208ENST00000580019 ATP5EP2Q5VTU8 51 aa1.23□□□□□ -2.21
KPNB1-208ENST00000580019 DEFB107AQ8IZN7 70 aa1.23□□□□□ -2.21
KPNB1-208ENST00000580019 UBE2D4Q9Y2X8 147 aa1.23□□□□□ -2.21
KPNB1-208ENST00000580019 TRBV6-1A0A0K0K1D8 114 aa1.22□□□□□ -2.21
KPNB1-208ENST00000580019 SMIM13P0DJ93 91 aa1.22□□□□□ -2.21
KPNB1-208ENST00000580019 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
KPNB1-208ENST00000580019 MINOS1Q5TGZ0 78 aa1.22□□□□□ -2.21
KPNB1-208ENST00000580019 C10orf113Q5VZT2 155 aa1.22□□□□□ -2.21
KPNB1-208ENST00000580019 Q6JHZ5 121 aa1.22□□□□□ -2.21
KPNB1-208ENST00000580019 USH2AO75445 5202 aa1.21□□□□□ -2.22
KPNB1-208ENST00000580019 DEFB131BA0A096LNP1 70 aa1.21□□□□□ -2.22
KPNB1-208ENST00000580019 UMAD1C9J7I0 102 aa1.21□□□□□ -2.22
KPNB1-208ENST00000580019 KRTAP12-4P60329 112 aa1.21□□□□□ -2.22
KPNB1-208ENST00000580019 C6orf201Q7Z4U5 140 aa1.21□□□□□ -2.22
KPNB1-208ENST00000580019 GAFA1Q96PS6 74 aa1.21□□□□□ -2.22
KPNB1-208ENST00000580019 PLAC8Q9NZF1 115 aa1.21□□□□□ -2.22
KPNB1-208ENST00000580019 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
KPNB1-208ENST00000580019 A0A1B0GUT8 65 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms