RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 SPINK1P00995 79 aa4.1□□□□□ -1.75
RNF43-204ENST00000580014 PDE6GP18545 87 aa4.1□□□□□ -1.75
RNF43-204ENST00000580014 RBM3P98179 157 aaKnown RBP4.1□□□□□ -1.75
RNF43-204ENST00000580014 MTURNQ8N3F0 131 aa4.1□□□□□ -1.75
RNF43-204ENST00000580014 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
RNF43-204ENST00000580014 IGLV7-46A0A075B6I9 117 aa4.09□□□□□ -1.75
RNF43-204ENST00000580014 A0A0G2JQZ4 141 aa4.09□□□□□ -1.75
RNF43-204ENST00000580014 A0A1W2PNM2 257 aa4.09□□□□□ -1.75
RNF43-204ENST00000580014 A0A1B0GW54 56 aa4.08□□□□□ -1.76
RNF43-204ENST00000580014 Q6ZQT0 140 aa4.08□□□□□ -1.76
RNF43-204ENST00000580014 TEN1Q86WV5 123 aa4.08□□□□□ -1.76
RNF43-204ENST00000580014 DMBT1Q9UGM3 2413 aaPredicted RBP4.07□□□□□ -1.76
RNF43-204ENST00000580014 TRBV7-7A0A0K0K1E9 115 aa4.07□□□□□ -1.76
RNF43-204ENST00000580014 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
RNF43-204ENST00000580014 DSCR8Q96T75 97 aa4.07□□□□□ -1.76
RNF43-204ENST00000580014 C14orf132Q9NPU4 83 aa4.06□□□□□ -1.76
RNF43-204ENST00000580014 CCKP06307 115 aa4.05□□□□□ -1.76
RNF43-204ENST00000580014 ETDBQ3ZM63 59 aa4.05□□□□□ -1.76
RNF43-204ENST00000580014 LIMD2Q9BT23 127 aa4.04□□□□□ -1.76
RNF43-204ENST00000580014 A0A1B0GV72 72 aa4.03□□□□□ -1.76
RNF43-204ENST00000580014 HRCT1Q6UXD1 115 aa4.03□□□□□ -1.76
RNF43-204ENST00000580014 A0A087WSZ3 146 aa4.02□□□□□ -1.77
RNF43-204ENST00000580014 MT3P25713 68 aa4.02□□□□□ -1.77
RNF43-204ENST00000580014 C1orf195Q5TG92 126 aa4.02□□□□□ -1.77
RNF43-204ENST00000580014 SS18L2Q9UHA2 77 aa4.02□□□□□ -1.77
RNF43-204ENST00000580014 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
RNF43-204ENST00000580014 Q96NJ1 140 aa4.01□□□□□ -1.77
RNF43-204ENST00000580014 OCR1Q9BZK8 76 aa4.01□□□□□ -1.77
RNF43-204ENST00000580014 NDUFAF8A1L188 74 aa4□□□□□ -1.77
RNF43-204ENST00000580014 LINC00472Q9H8W2 130 aa4□□□□□ -1.77
RNF43-204ENST00000580014 VPS25Q9BRG1 176 aa3.99□□□□□ -1.77
RNF43-204ENST00000580014 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
RNF43-204ENST00000580014 ACYP1P07311 99 aa3.97□□□□□ -1.77
RNF43-204ENST00000580014 RETNLBQ9BQ08 111 aa3.97□□□□□ -1.77
RNF43-204ENST00000580014 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
RNF43-204ENST00000580014 J3KT08 172 aa3.95□□□□□ -1.78
RNF43-204ENST00000580014 NREPQ16612 68 aa3.95□□□□□ -1.78
RNF43-204ENST00000580014 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
RNF43-204ENST00000580014 KRTAP13-3Q3SY46 172 aa3.94□□□□□ -1.78
RNF43-204ENST00000580014 PRR4Q16378 134 aa3.93□□□□□ -1.78
RNF43-204ENST00000580014 UBL5Q9BZL1 73 aa3.93□□□□□ -1.78
RNF43-204ENST00000580014 J3QR89 54 aa3.92□□□□□ -1.78
RNF43-204ENST00000580014 IGKV4-1P06312 121 aa3.92□□□□□ -1.78
RNF43-204ENST00000580014 DSCR10P59022 87 aa3.92□□□□□ -1.78
RNF43-204ENST00000580014 A8MWP4 228 aa3.91□□□□□ -1.78
RNF43-204ENST00000580014 HERC1Q15751 4861 aa3.91□□□□□ -1.78
RNF43-204ENST00000580014 DEFB116Q30KQ4 102 aa3.91□□□□□ -1.78
RNF43-204ENST00000580014 SIGMAR1Q99720 223 aa3.91□□□□□ -1.78
RNF43-204ENST00000580014 IGKV3D-7A0A0C4DH55 119 aa3.9□□□□□ -1.79
RNF43-204ENST00000580014 A0A1B0GVX0 72 aa3.9□□□□□ -1.79
RNF43-204ENST00000580014 KRTAP16-1A8MUX0 517 aa3.9□□□□□ -1.79
RNF43-204ENST00000580014 BPY2O14599 106 aa3.9□□□□□ -1.79
RNF43-204ENST00000580014 PRR15Q8IV56 129 aa3.9□□□□□ -1.79
RNF43-204ENST00000580014 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
RNF43-204ENST00000580014 K7ERU9 68 aa3.89□□□□□ -1.79
RNF43-204ENST00000580014 CXCL6P80162 114 aa3.89□□□□□ -1.79
RNF43-204ENST00000580014 C8orf87E5RJ46 101 aa3.88□□□□□ -1.79
RNF43-204ENST00000580014 NDUFB1O75438 58 aa3.88□□□□□ -1.79
RNF43-204ENST00000580014 ATP5EP2Q5VTU8 51 aa3.88□□□□□ -1.79
RNF43-204ENST00000580014 LINC00643Q86TS7 51 aa3.88□□□□□ -1.79
RNF43-204ENST00000580014 K7EQZ3 153 aa3.87□□□□□ -1.79
RNF43-204ENST00000580014 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
RNF43-204ENST00000580014 LINC00313P59037 77 aa3.86□□□□□ -1.79
RNF43-204ENST00000580014 C8orf17Q9NRJ1 99 aa3.86□□□□□ -1.79
RNF43-204ENST00000580014 IGHV6-1A0A0B4J1U7 121 aa3.85□□□□□ -1.79
RNF43-204ENST00000580014 MMP24-AS1A0A0U1RRL7 71 aa3.85□□□□□ -1.79
RNF43-204ENST00000580014 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
RNF43-204ENST00000580014 A8MUU9 505 aa3.85□□□□□ -1.79
RNF43-204ENST00000580014 C20orf166-AS1Q96NR2 134 aa3.85□□□□□ -1.79
RNF43-204ENST00000580014 Q8N9L7 120 aa3.84□□□□□ -1.79
RNF43-204ENST00000580014 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
RNF43-204ENST00000580014 TMEM254Q8TBM7 123 aa3.82□□□□□ -1.8
RNF43-204ENST00000580014 hDV103S1A0JD37 113 aa3.8□□□□□ -1.8
RNF43-204ENST00000580014 HCG22E2RYF7 251 aa3.8□□□□□ -1.8
RNF43-204ENST00000580014 MRPL34Q9BQ48 92 aaKnown RBP3.8□□□□□ -1.8
RNF43-204ENST00000580014 IMUPQ9GZP8 106 aa3.8□□□□□ -1.8
RNF43-204ENST00000580014 CASC2Q6XLA1 102 aa3.79□□□□□ -1.8
RNF43-204ENST00000580014 LPAP08519 4548 aa3.78□□□□□ -1.8
RNF43-204ENST00000580014 MT-ATP8P03928 68 aa3.78□□□□□ -1.8
RNF43-204ENST00000580014 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
RNF43-204ENST00000580014 LRP2P98164 4655 aa3.76□□□□□ -1.81
RNF43-204ENST00000580014 A0A087WVE0 104 aa3.76□□□□□ -1.81
RNF43-204ENST00000580014 HIST1H4AP62805 103 aaKnown RBP3.76□□□□□ -1.81
RNF43-204ENST00000580014 PCOTHQ58A44 107 aa3.76□□□□□ -1.81
RNF43-204ENST00000580014 MUC17Q685J3 4493 aa3.76□□□□□ -1.81
RNF43-204ENST00000580014 ATP11AUNQ6ZP68 121 aa3.75□□□□□ -1.81
RNF43-204ENST00000580014 ZCCHC13Q8WW36 166 aaKnown RBP3.75□□□□□ -1.81
RNF43-204ENST00000580014 UBR4Q5T4S7 5183 aa3.74□□□□□ -1.81
RNF43-204ENST00000580014 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
RNF43-204ENST00000580014 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
RNF43-204ENST00000580014 Q5W150 140 aa3.72□□□□□ -1.81
RNF43-204ENST00000580014 UQCRQO14949 82 aa3.7□□□□□ -1.82
RNF43-204ENST00000580014 NDUFS5O43920 106 aa3.7□□□□□ -1.82
RNF43-204ENST00000580014 RNF213Q63HN8 5207 aa3.7□□□□□ -1.82
RNF43-204ENST00000580014 FAM236AA0A1B0GUQ0 79 aa3.67□□□□□ -1.82
RNF43-204ENST00000580014 FAM236BA0A1B0GV22 79 aa3.67□□□□□ -1.82
RNF43-204ENST00000580014 TRAV22A0A0B4J277 110 aa3.66□□□□□ -1.82
RNF43-204ENST00000580014 HRES1P13985 223 aa3.66□□□□□ -1.82
RNF43-204ENST00000580014 SPINK7P58062 85 aa3.66□□□□□ -1.82
RNF43-204ENST00000580014 KRTAP19-2Q3LHN2 52 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms