RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TRBV7-7A0A0K0K1E9 115 aa2.09□□□□□ -2.07
SMARCE1-215ENST00000578995 COX6CP09669 75 aa2.09□□□□□ -2.07
SMARCE1-215ENST00000578995 ATXN8Q156A1 80 aa2.09□□□□□ -2.07
SMARCE1-215ENST00000578995 TPRXLQ17RH7 258 aa2.09□□□□□ -2.07
SMARCE1-215ENST00000578995 C1orf195Q5TG92 126 aa2.09□□□□□ -2.07
SMARCE1-215ENST00000578995 Q6JHZ5 121 aa2.09□□□□□ -2.07
SMARCE1-215ENST00000578995 FP248Q71RG6 208 aaPredicted RBP2.09□□□□□ -2.07
SMARCE1-215ENST00000578995 TRBV20-1A0A075B6N2 111 aa2.08□□□□□ -2.08
SMARCE1-215ENST00000578995 PCP4L1A6NKN8 68 aa2.08□□□□□ -2.08
SMARCE1-215ENST00000578995 H3BMG7 143 aa2.08□□□□□ -2.08
SMARCE1-215ENST00000578995 TMEM256-PLSCR3K7ERE1 68 aa2.08□□□□□ -2.08
SMARCE1-215ENST00000578995 COL5A1-AS1Q5SY13 56 aa2.08□□□□□ -2.08
SMARCE1-215ENST00000578995 HRCT1Q6UXD1 115 aa2.08□□□□□ -2.08
SMARCE1-215ENST00000578995 MUC2Q02817 5179 aa2.08□□□□□ -2.08
SMARCE1-215ENST00000578995 IGLV7-46A0A075B6I9 117 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 LOC110117498A0A087WWA1 95 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 C9JAW5 83 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 F8WEM9 126 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 H3BQ85 93 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 H3BT86 120 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 K7EP34 96 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 DNAL4O96015 105 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 BAALC-AS2P0C853 105 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 SCGB1C2P0DMR2 95 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 FABP2P12104 132 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 PRR4Q16378 134 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 Q6ZQT0 140 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 TEN1Q86WV5 123 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 MTURNQ8N3F0 131 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 ANKRD29Q8N6D5 301 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 LIMD2Q9BT23 127 aa2.07□□□□□ -2.08
SMARCE1-215ENST00000578995 LYRM7Q5U5X0 104 aa2.06□□□□□ -2.08
SMARCE1-215ENST00000578995 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
SMARCE1-215ENST00000578995 LINC00472Q9H8W2 130 aa2.06□□□□□ -2.08
SMARCE1-215ENST00000578995 SPCS1Q9Y6A9 102 aa2.06□□□□□ -2.08
SMARCE1-215ENST00000578995 FAT4Q6V0I7 4981 aa2.05□□□□□ -2.08
SMARCE1-215ENST00000578995 A0A087WSZ3 146 aa2.05□□□□□ -2.08
SMARCE1-215ENST00000578995 A0A1B0GV72 72 aa2.05□□□□□ -2.08
SMARCE1-215ENST00000578995 SNCGO76070 127 aa2.05□□□□□ -2.08
SMARCE1-215ENST00000578995 KRTAP16-1A8MUX0 517 aa2.04□□□□□ -2.08
SMARCE1-215ENST00000578995 JMJD7-PLA2G4BH0Y9G9 81 aa2.04□□□□□ -2.08
SMARCE1-215ENST00000578995 CCKP06307 115 aa2.04□□□□□ -2.08
SMARCE1-215ENST00000578995 RBM3P98179 157 aaKnown RBP2.04□□□□□ -2.08
SMARCE1-215ENST00000578995 C14orf132Q9NPU4 83 aa2.04□□□□□ -2.08
SMARCE1-215ENST00000578995 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
SMARCE1-215ENST00000578995 NOTCH2NLQ7Z3S9 236 aa2.03□□□□□ -2.08
SMARCE1-215ENST00000578995 SS18L2Q9UHA2 77 aa2.03□□□□□ -2.08
SMARCE1-215ENST00000578995 A0A1B0GV90 55 aa2.02□□□□□ -2.09
SMARCE1-215ENST00000578995 A0A1B0GW54 56 aa2.02□□□□□ -2.09
SMARCE1-215ENST00000578995 C9orf92A6NGG3 77 aa2.02□□□□□ -2.09
SMARCE1-215ENST00000578995 DSCR8Q96T75 97 aa2.02□□□□□ -2.09
SMARCE1-215ENST00000578995 A8MUU9 505 aa2.01□□□□□ -2.09
SMARCE1-215ENST00000578995 PDE6GP18545 87 aa2.01□□□□□ -2.09
SMARCE1-215ENST00000578995 DSCR10P59022 87 aa2.01□□□□□ -2.09
SMARCE1-215ENST00000578995 RPL37P61927 97 aaKnown RBP2.01□□□□□ -2.09
SMARCE1-215ENST00000578995 C21orf62-AS1Q17RA5 79 aa2.01□□□□□ -2.09
SMARCE1-215ENST00000578995 DEFB116Q30KQ4 102 aa2.01□□□□□ -2.09
SMARCE1-215ENST00000578995 C20orf166-AS1Q96NR2 134 aa2.01□□□□□ -2.09
SMARCE1-215ENST00000578995 F8W1H4 67 aa2□□□□□ -2.09
SMARCE1-215ENST00000578995 ETDBQ3ZM63 59 aa2□□□□□ -2.09
SMARCE1-215ENST00000578995 LCE3CQ5T5A8 94 aa2□□□□□ -2.09
SMARCE1-215ENST00000578995 GTF2H5Q6ZYL4 71 aa2□□□□□ -2.09
SMARCE1-215ENST00000578995 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
SMARCE1-215ENST00000578995 VPS25Q9BRG1 176 aa2□□□□□ -2.09
SMARCE1-215ENST00000578995 IGKV3D-7A0A0C4DH55 119 aa1.99□□□□□ -2.09
SMARCE1-215ENST00000578995 A0A1B0GVX0 72 aa1.99□□□□□ -2.09
SMARCE1-215ENST00000578995 IGKV4-1P06312 121 aa1.99□□□□□ -2.09
SMARCE1-215ENST00000578995 Q6ZVQ6 151 aa1.99□□□□□ -2.09
SMARCE1-215ENST00000578995 Q75L30 129 aa1.99□□□□□ -2.09
SMARCE1-215ENST00000578995 LINC00846Q9NV44 126 aa1.99□□□□□ -2.09
SMARCE1-215ENST00000578995 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
SMARCE1-215ENST00000578995 MMP24-AS1A0A0U1RRL7 71 aa1.98□□□□□ -2.09
SMARCE1-215ENST00000578995 A8MWP4 228 aa1.98□□□□□ -2.09
SMARCE1-215ENST00000578995 J3KT08 172 aa1.98□□□□□ -2.09
SMARCE1-215ENST00000578995 PCOTHQ58A44 107 aa1.98□□□□□ -2.09
SMARCE1-215ENST00000578995 SIGMAR1Q99720 223 aa1.98□□□□□ -2.09
SMARCE1-215ENST00000578995 K7EQZ3 153 aa1.97□□□□□ -2.09
SMARCE1-215ENST00000578995 SEC61BP60468 96 aaKnown RBP1.97□□□□□ -2.09
SMARCE1-215ENST00000578995 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
SMARCE1-215ENST00000578995 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
SMARCE1-215ENST00000578995 PRR15Q8IV56 129 aa1.97□□□□□ -2.09
SMARCE1-215ENST00000578995 C8orf17Q9NRJ1 99 aa1.97□□□□□ -2.09
SMARCE1-215ENST00000578995 IGHV6-1A0A0B4J1U7 121 aa1.96□□□□□ -2.1
SMARCE1-215ENST00000578995 FAM240AA0A1B0GVK7 77 aa1.96□□□□□ -2.1
SMARCE1-215ENST00000578995 C8orf87E5RJ46 101 aa1.96□□□□□ -2.1
SMARCE1-215ENST00000578995 LINC00313P59037 77 aa1.96□□□□□ -2.1
SMARCE1-215ENST00000578995 Q8N9L7 120 aa1.96□□□□□ -2.1
SMARCE1-215ENST00000578995 BPY2O14599 106 aa1.95□□□□□ -2.1
SMARCE1-215ENST00000578995 NREPQ16612 68 aa1.95□□□□□ -2.1
SMARCE1-215ENST00000578995 MPLKIPQ8TAP9 179 aa1.95□□□□□ -2.1
SMARCE1-215ENST00000578995 TMEM254Q8TBM7 123 aa1.94□□□□□ -2.1
SMARCE1-215ENST00000578995 HRES1P13985 223 aa1.93□□□□□ -2.1
SMARCE1-215ENST00000578995 CXCL6P80162 114 aa1.93□□□□□ -2.1
SMARCE1-215ENST00000578995 MT1HP80294 61 aa1.93□□□□□ -2.1
SMARCE1-215ENST00000578995 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
SMARCE1-215ENST00000578995 MRPL34Q9BQ48 92 aaKnown RBP1.93□□□□□ -2.1
SMARCE1-215ENST00000578995 NDUFB1O75438 58 aa1.92□□□□□ -2.1
SMARCE1-215ENST00000578995 ACYP1P07311 99 aa1.92□□□□□ -2.1
SMARCE1-215ENST00000578995 Q5W150 140 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms