RNA–Protein interactions for RNA: ENST00000578698.1

PTPRM-209, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-209ENST00000578698 AKAP13Q12802 2813 aa1.23□□□□□ -2.21
PTPRM-209ENST00000578698 SONP18583 2426 aaKnown RBP1.23□□□□□ -2.21
PTPRM-209ENST00000578698 LYNX1G3V0Z9 82 aa1.23□□□□□ -2.21
PTPRM-209ENST00000578698 G3V318 75 aa1.23□□□□□ -2.21
PTPRM-209ENST00000578698 ANGP03950 147 aaKnown RBP1.23□□□□□ -2.21
PTPRM-209ENST00000578698 LINC00308Q8TCZ7 52 aa1.23□□□□□ -2.21
PTPRM-209ENST00000578698 WNK1Q9H4A3 2382 aa1.23□□□□□ -2.21
PTPRM-209ENST00000578698 PDZD2O15018 2839 aa1.23□□□□□ -2.21
PTPRM-209ENST00000578698 NBEAL2Q6ZNJ1 2754 aa1.23□□□□□ -2.21
PTPRM-209ENST00000578698 CELSR2Q9HCU4 2923 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 CELSR1Q9NYQ6 3014 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 CRYBG3Q68DQ2 2970 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 GVQW2A0A096LPI5 108 aaPredicted RBP1.22□□□□□ -2.21
PTPRM-209ENST00000578698 NDUFA1O15239 70 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 ACYP2P14621 99 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 LINC00158P58513 81 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 RPL38P63173 70 aaKnown RBP1.22□□□□□ -2.21
PTPRM-209ENST00000578698 Q6ZRX8 168 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 APCP25054 2843 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 ALMS1Q8TCU4 4167 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 CSMD2Q7Z408 3487 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 MGAQ8IWI9 3026 aa1.22□□□□□ -2.21
PTPRM-209ENST00000578698 LINC01590Q5TEZ4 76 aa1.21□□□□□ -2.22
PTPRM-209ENST00000578698 COX6B2Q6YFQ2 88 aa1.21□□□□□ -2.22
PTPRM-209ENST00000578698 Q8IZM0 81 aa1.21□□□□□ -2.22
PTPRM-209ENST00000578698 SMIM11BQ8TCY0 68 aa1.21□□□□□ -2.22
PTPRM-209ENST00000578698 CADP27708 2225 aa1.21□□□□□ -2.22
PTPRM-209ENST00000578698 TFF3Q07654 80 aa1.2□□□□□ -2.22
PTPRM-209ENST00000578698 ARHGAP5-AS1Q96IT6 56 aa1.2□□□□□ -2.22
PTPRM-209ENST00000578698 TIMM8BQ9Y5J9 83 aaPredicted RBP1.2□□□□□ -2.22
PTPRM-209ENST00000578698 UTP20O75691 2785 aaKnown RBP1.2□□□□□ -2.22
PTPRM-209ENST00000578698 ACANP16112 2415 aa1.2□□□□□ -2.22
PTPRM-209ENST00000578698 PLCE1Q9P212 2302 aa1.2□□□□□ -2.22
PTPRM-209ENST00000578698 MGAM2Q2M2H8 2515 aa1.19□□□□□ -2.22
PTPRM-209ENST00000578698 KRTAP10-4P60372 401 aaPredicted RBP1.19□□□□□ -2.22
PTPRM-209ENST00000578698 CDKN2A-AS1Q9UH64 79 aa1.19□□□□□ -2.22
PTPRM-209ENST00000578698 POLR2KP53803 58 aaKnown RBP1.18□□□□□ -2.22
PTPRM-209ENST00000578698 SPINK13Q1W4C9 94 aa1.18□□□□□ -2.22
PTPRM-209ENST00000578698 KNL1Q8NG31 2342 aa1.17□□□□□ -2.22
PTPRM-209ENST00000578698 DCHS2Q6V1P9 2916 aa1.17□□□□□ -2.22
PTPRM-209ENST00000578698 TGP01266 2768 aa1.17□□□□□ -2.22
PTPRM-209ENST00000578698 K7EQZ3 153 aa1.17□□□□□ -2.22
PTPRM-209ENST00000578698 RPS27LQ71UM5 84 aaKnown RBP1.17□□□□□ -2.22
PTPRM-209ENST00000578698 SSBP3-AS1Q7Z2R9 100 aa1.17□□□□□ -2.22
PTPRM-209ENST00000578698 TP53AIP1Q9HCN2 124 aa1.17□□□□□ -2.22
PTPRM-209ENST00000578698 BSNQ9UPA5 3926 aa1.16□□□□□ -2.22
PTPRM-209ENST00000578698 SPTY2D1-AS1A0A0U1RR47 76 aa1.16□□□□□ -2.22
PTPRM-209ENST00000578698 IAPPP10997 89 aa1.16□□□□□ -2.22
PTPRM-209ENST00000578698 CD52P31358 61 aa1.16□□□□□ -2.22
PTPRM-209ENST00000578698 RPL37P61927 97 aaKnown RBP1.16□□□□□ -2.22
PTPRM-209ENST00000578698 MXRA5Q9NR99 2828 aa1.16□□□□□ -2.22
PTPRM-209ENST00000578698 CUBNO60494 3623 aa1.16□□□□□ -2.22
PTPRM-209ENST00000578698 PKDREJQ9NTG1 2253 aa1.15□□□□□ -2.22
PTPRM-209ENST00000578698 NSD1Q96L73 2696 aaPredicted RBP1.15□□□□□ -2.22
PTPRM-209ENST00000578698 TENM1Q9UKZ4 2725 aa1.15□□□□□ -2.23
PTPRM-209ENST00000578698 IGLV5-48A0A075B6I7 105 aa1.15□□□□□ -2.23
PTPRM-209ENST00000578698 K7EIL1 84 aa1.15□□□□□ -2.23
PTPRM-209ENST00000578698 AKAP9Q99996 3911 aa1.15□□□□□ -2.23
PTPRM-209ENST00000578698 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.23
PTPRM-209ENST00000578698 VWFP04275 2813 aa1.14□□□□□ -2.23
PTPRM-209ENST00000578698 VPS13CQ709C8 3753 aa1.14□□□□□ -2.23
PTPRM-209ENST00000578698 BIRC6Q9NR09 4857 aa1.13□□□□□ -2.23
PTPRM-209ENST00000578698 I3L2K1 104 aa1.13□□□□□ -2.23
PTPRM-209ENST00000578698 TACC2O95359 2948 aa1.13□□□□□ -2.23
PTPRM-209ENST00000578698 ZNF469Q96JG9 3925 aaPredicted RBP1.12□□□□□ -2.23
PTPRM-209ENST00000578698 MEGF8Q7Z7M0 2845 aa1.12□□□□□ -2.23
PTPRM-209ENST00000578698 KMT2CQ8NEZ4 4911 aaKnown RBP1.12□□□□□ -2.23
PTPRM-209ENST00000578698 PRRC2CQ9Y520 2896 aaKnown RBP1.12□□□□□ -2.23
PTPRM-209ENST00000578698 TENM3Q9P273 2699 aa1.12□□□□□ -2.23
PTPRM-209ENST00000578698 H0YAA0 97 aa1.12□□□□□ -2.23
PTPRM-209ENST00000578698 DEFB109BQ30KR1 87 aa1.12□□□□□ -2.23
PTPRM-209ENST00000578698 CRIPTQ9P021 101 aa1.12□□□□□ -2.23
PTPRM-209ENST00000578698 AKAP6Q13023 2319 aa1.11□□□□□ -2.23
PTPRM-209ENST00000578698 RYR3Q15413 4870 aa1.11□□□□□ -2.23
PTPRM-209ENST00000578698 CCL22O00626 93 aa1.11□□□□□ -2.23
PTPRM-209ENST00000578698 USMG5Q96IX5 58 aa1.11□□□□□ -2.23
PTPRM-209ENST00000578698 SMR3AQ99954 134 aa1.11□□□□□ -2.23
PTPRM-209ENST00000578698 MRPL34Q9BQ48 92 aaKnown RBP1.11□□□□□ -2.23
PTPRM-209ENST00000578698 ANK2Q01484 3957 aa1.11□□□□□ -2.23
PTPRM-209ENST00000578698 WNK2Q9Y3S1 2297 aa1.11□□□□□ -2.23
PTPRM-209ENST00000578698 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
PTPRM-209ENST00000578698 MAP1AP78559 2803 aaPredicted RBP1.11□□□□□ -2.23
PTPRM-209ENST00000578698 SVEP1Q4LDE5 3571 aa1.11□□□□□ -2.23
PTPRM-209ENST00000578698 RYR1P21817 5038 aa1.09□□□□□ -2.23
PTPRM-209ENST00000578698 UBE2DNLQ8IWF7 75 aa1.09□□□□□ -2.23
PTPRM-209ENST00000578698 C6orf48Q9UBA6 75 aa1.09□□□□□ -2.23
PTPRM-209ENST00000578698 TENM2Q9NT68 2774 aa1.08□□□□□ -2.24
PTPRM-209ENST00000578698 RPL39P62891 51 aaKnown RBP1.08□□□□□ -2.24
PTPRM-209ENST00000578698 PRCDQ00LT1 54 aa1.08□□□□□ -2.24
PTPRM-209ENST00000578698 COX6A2Q02221 97 aa1.08□□□□□ -2.24
PTPRM-209ENST00000578698 MINOS1Q5TGZ0 78 aa1.08□□□□□ -2.24
PTPRM-209ENST00000578698 STAB2Q8WWQ8 2551 aa1.08□□□□□ -2.24
PTPRM-209ENST00000578698 RPS27P42677 84 aaKnown RBP1.07□□□□□ -2.24
PTPRM-209ENST00000578698 DEFB131AP59861 70 aa1.07□□□□□ -2.24
PTPRM-209ENST00000578698 TTTY10Q9BZA0 68 aa1.07□□□□□ -2.24
PTPRM-209ENST00000578698 ZANQ9Y493 2812 aa1.07□□□□□ -2.24
PTPRM-209ENST00000578698 PCLOQ9Y6V0 5065 aa1.06□□□□□ -2.24
PTPRM-209ENST00000578698 USF3Q68DE3 2245 aa1.06□□□□□ -2.24
PTPRM-209ENST00000578698 M0QY20 66 aa1.06□□□□□ -2.24
PTPRM-209ENST00000578698 PIGYQ3MUY2 71 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms