RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 LINC00313P59037 77 aa11.72□□□□□ -0.53
SMARCD2-206ENST00000577990 SPCS1Q9Y6A9 102 aa11.72□□□□□ -0.53
SMARCD2-206ENST00000577990 IGHV6-1A0A0B4J1U7 121 aa11.68□□□□□ -0.54
SMARCD2-206ENST00000577990 J3KT08 172 aa11.68□□□□□ -0.54
SMARCD2-206ENST00000577990 NOTCH2NLQ7Z3S9 236 aa11.67□□□□□ -0.54
SMARCD2-206ENST00000577990 LCE2CQ5TA81 110 aa11.66□□□□□ -0.54
SMARCD2-206ENST00000577990 A0A1B0GVX0 72 aa11.65□□□□□ -0.54
SMARCD2-206ENST00000577990 KRTAP16-1A8MUX0 517 aa11.65□□□□□ -0.54
SMARCD2-206ENST00000577990 KRTAP19-2Q3LHN2 52 aa11.64□□□□□ -0.55
SMARCD2-206ENST00000577990 C8orf87E5RJ46 101 aa11.63□□□□□ -0.55
SMARCD2-206ENST00000577990 PCP4L1A6NKN8 68 aa11.61□□□□□ -0.55
SMARCD2-206ENST00000577990 K7EP34 96 aa11.57□□□□□ -0.56
SMARCD2-206ENST00000577990 NDUFB1O75438 58 aa11.57□□□□□ -0.56
SMARCD2-206ENST00000577990 KRTAP9-6A0A140TA67 174 aa11.56□□□□□ -0.56
SMARCD2-206ENST00000577990 SMCPP49901 116 aaPredicted RBP11.56□□□□□ -0.56
SMARCD2-206ENST00000577990 NREPQ16612 68 aa11.56□□□□□ -0.56
SMARCD2-206ENST00000577990 A8MWP4 228 aa11.54□□□□□ -0.56
SMARCD2-206ENST00000577990 PRO0461Q9UI25 63 aa11.52□□□□□ -0.57
SMARCD2-206ENST00000577990 MT1HP80294 61 aa11.51□□□□□ -0.57
SMARCD2-206ENST00000577990 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
SMARCD2-206ENST00000577990 COX6B2Q6YFQ2 88 aa11.49□□□□□ -0.57
SMARCD2-206ENST00000577990 C8orf17Q9NRJ1 99 aa11.47□□□□□ -0.57
SMARCD2-206ENST00000577990 GTF2H5Q6ZYL4 71 aa11.46□□□□□ -0.57
SMARCD2-206ENST00000577990 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
SMARCD2-206ENST00000577990 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
SMARCD2-206ENST00000577990 Q8N9P0 234 aaPredicted RBP11.4□□□□□ -0.58
SMARCD2-206ENST00000577990 FLGP20930 4061 aaPredicted RBP11.39□□□□□ -0.59
SMARCD2-206ENST00000577990 BPY2O14599 106 aa11.38□□□□□ -0.59
SMARCD2-206ENST00000577990 Q6ZVQ6 151 aa11.38□□□□□ -0.59
SMARCD2-206ENST00000577990 ZCCHC13Q8WW36 166 aaKnown RBP11.37□□□□□ -0.59
SMARCD2-206ENST00000577990 K7EQZ3 153 aa11.36□□□□□ -0.59
SMARCD2-206ENST00000577990 MMP24-AS1A0A0U1RRL7 71 aa11.35□□□□□ -0.59
SMARCD2-206ENST00000577990 F8W1H4 67 aa11.34□□□□□ -0.59
SMARCD2-206ENST00000577990 FSIP2Q5CZC0 6907 aa11.32□□□□□ -0.6
SMARCD2-206ENST00000577990 TMEM254Q8TBM7 123 aa11.32□□□□□ -0.6
SMARCD2-206ENST00000577990 KRTAP10-6P60371 365 aaPredicted RBP11.31□□□□□ -0.6
SMARCD2-206ENST00000577990 M0R2T5 61 aa11.3□□□□□ -0.6
SMARCD2-206ENST00000577990 LORP23490 312 aaPredicted RBP11.3□□□□□ -0.6
SMARCD2-206ENST00000577990 LINC00846Q9NV44 126 aa11.3□□□□□ -0.6
SMARCD2-206ENST00000577990 MRPL34Q9BQ48 92 aaKnown RBP11.29□□□□□ -0.6
SMARCD2-206ENST00000577990 hDV103S1A0JD37 113 aa11.28□□□□□ -0.6
SMARCD2-206ENST00000577990 UBL5Q9BZL1 73 aa11.28□□□□□ -0.6
SMARCD2-206ENST00000577990 ETDBQ3ZM63 59 aa11.27□□□□□ -0.61
SMARCD2-206ENST00000577990 HRES1P13985 223 aa11.26□□□□□ -0.61
SMARCD2-206ENST00000577990 Q8N9L7 120 aa11.24□□□□□ -0.61
SMARCD2-206ENST00000577990 CRCT1Q9UGL9 99 aa11.24□□□□□ -0.61
SMARCD2-206ENST00000577990 MPLKIPQ8TAP9 179 aa11.22□□□□□ -0.61
SMARCD2-206ENST00000577990 RBM12B-AS1Q9P1G2 102 aa11.21□□□□□ -0.61
SMARCD2-206ENST00000577990 FAM236DA0A1B0GTK5 79 aa11.2□□□□□ -0.62
SMARCD2-206ENST00000577990 FAM236CP0DP71 79 aa11.2□□□□□ -0.62
SMARCD2-206ENST00000577990 SPINK7P58062 85 aa11.2□□□□□ -0.62
SMARCD2-206ENST00000577990 NDUFS5O43920 106 aa11.19□□□□□ -0.62
SMARCD2-206ENST00000577990 WFDC13Q8IUB5 93 aa11.18□□□□□ -0.62
SMARCD2-206ENST00000577990 CASC2Q6XLA1 102 aa11.16□□□□□ -0.62
SMARCD2-206ENST00000577990 HCG22E2RYF7 251 aa11.07□□□□□ -0.64
SMARCD2-206ENST00000577990 CXCL6P80162 114 aa11.06□□□□□ -0.64
SMARCD2-206ENST00000577990 Q5W150 140 aa11.03□□□□□ -0.64
SMARCD2-206ENST00000577990 ACYP1P07311 99 aa11.01□□□□□ -0.65
SMARCD2-206ENST00000577990 A0A1B0GV90 55 aa10.99□□□□□ -0.65
SMARCD2-206ENST00000577990 FAM240AA0A1B0GVK7 77 aa10.98□□□□□ -0.65
SMARCD2-206ENST00000577990 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.65
SMARCD2-206ENST00000577990 IGKV2-30P06310 120 aa10.96□□□□□ -0.65
SMARCD2-206ENST00000577990 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
SMARCD2-206ENST00000577990 ATP5EP2Q5VTU8 51 aa10.88□□□□□ -0.67
SMARCD2-206ENST00000577990 KRTAP9-8Q9BYQ0 159 aa10.88□□□□□ -0.67
SMARCD2-206ENST00000577990 TP53AIP1Q9HCN2 124 aa10.86□□□□□ -0.67
SMARCD2-206ENST00000577990 H1FX-AS1Q4G0G2 97 aa10.79□□□□□ -0.68
SMARCD2-206ENST00000577990 USH2AO75445 5202 aa10.78□□□□□ -0.68
SMARCD2-206ENST00000577990 MT2AP02795 61 aa10.77□□□□□ -0.69
SMARCD2-206ENST00000577990 HIST1H4AP62805 103 aaKnown RBP10.77□□□□□ -0.69
SMARCD2-206ENST00000577990 LINC00643Q86TS7 51 aa10.76□□□□□ -0.69
SMARCD2-206ENST00000577990 C4orf26Q17RF5 130 aa10.74□□□□□ -0.69
SMARCD2-206ENST00000577990 SSPOA2VEC9 5147 aa10.71□□□□□ -0.69
SMARCD2-206ENST00000577990 MT1FP04733 61 aa10.68□□□□□ -0.7
SMARCD2-206ENST00000577990 J3QR89 54 aa10.67□□□□□ -0.7
SMARCD2-206ENST00000577990 A0A087WVE0 104 aa10.65□□□□□ -0.7
SMARCD2-206ENST00000577990 TRAV22A0A0B4J277 110 aa10.64□□□□□ -0.71
SMARCD2-206ENST00000577990 KRTAP10-10P60014 251 aa10.64□□□□□ -0.71
SMARCD2-206ENST00000577990 UQCRQO14949 82 aa10.6□□□□□ -0.71
SMARCD2-206ENST00000577990 CYP4F30PQ9H0H9 118 aa10.59□□□□□ -0.71
SMARCD2-206ENST00000577990 LOC101927531A0A1B0GV80 90 aa10.58□□□□□ -0.72
SMARCD2-206ENST00000577990 C1orf64Q8NEQ6 169 aa10.58□□□□□ -0.72
SMARCD2-206ENST00000577990 KRTAP3-1Q9BYR8 98 aa10.58□□□□□ -0.72
SMARCD2-206ENST00000577990 KRTAP9-3Q9BYQ3 159 aa10.54□□□□□ -0.72
SMARCD2-206ENST00000577990 LCE2BO14633 110 aa10.53□□□□□ -0.72
SMARCD2-206ENST00000577990 H0Y9P7 68 aa10.52□□□□□ -0.73
SMARCD2-206ENST00000577990 ATOX1O00244 68 aa10.52□□□□□ -0.73
SMARCD2-206ENST00000577990 S4R3F8 94 aa10.49□□□□□ -0.73
SMARCD2-206ENST00000577990 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.48□□□□□ -0.73
SMARCD2-206ENST00000577990 FCGBPQ9Y6R7 5405 aaPredicted RBP10.46□□□□□ -0.73
SMARCD2-206ENST00000577990 C5orf47Q569G3 176 aa10.43□□□□□ -0.74
SMARCD2-206ENST00000577990 OCR1Q9BZK8 76 aa10.43□□□□□ -0.74
SMARCD2-206ENST00000577990 LCA10Q71F78 164 aa10.4□□□□□ -0.74
SMARCD2-206ENST00000577990 KRTAP19-1Q8IUB9 90 aa10.4□□□□□ -0.74
SMARCD2-206ENST00000577990 KRTAP9-7A8MTY7 169 aa10.39□□□□□ -0.75
SMARCD2-206ENST00000577990 MP68P56378 58 aa10.37□□□□□ -0.75
SMARCD2-206ENST00000577990 LINC00208Q96KT6 92 aa10.37□□□□□ -0.75
SMARCD2-206ENST00000577990 K7ERU9 68 aa10.36□□□□□ -0.75
SMARCD2-206ENST00000577990 CSAG1Q6PB30 78 aa10.36□□□□□ -0.75
SMARCD2-206ENST00000577990 SCGB1A1P11684 91 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms