RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 LOC110117498A0A087WWA1 95 aa7.51□□□□□ -1.21
RPAIN-216ENST00000575599 HRCT1Q6UXD1 115 aa7.51□□□□□ -1.21
RPAIN-216ENST00000575599 FP248Q71RG6 208 aaPredicted RBP7.51□□□□□ -1.21
RPAIN-216ENST00000575599 TRBV7-4A0A0J9YYF1 115 aa7.5□□□□□ -1.21
RPAIN-216ENST00000575599 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
RPAIN-216ENST00000575599 IGFL1Q6UW32 110 aa7.5□□□□□ -1.21
RPAIN-216ENST00000575599 CCKP06307 115 aa7.49□□□□□ -1.21
RPAIN-216ENST00000575599 Q6ZQT0 140 aa7.48□□□□□ -1.21
RPAIN-216ENST00000575599 J3QR89 54 aa7.47□□□□□ -1.21
RPAIN-216ENST00000575599 A0A0G2JQZ4 141 aa7.46□□□□□ -1.21
RPAIN-216ENST00000575599 LIMD2Q9BT23 127 aa7.46□□□□□ -1.22
RPAIN-216ENST00000575599 CD164Q04900 197 aa7.44□□□□□ -1.22
RPAIN-216ENST00000575599 A0A1W2PNM2 257 aa7.43□□□□□ -1.22
RPAIN-216ENST00000575599 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
RPAIN-216ENST00000575599 A0A1B0GW54 56 aa7.42□□□□□ -1.22
RPAIN-216ENST00000575599 Q6Q795 121 aa7.42□□□□□ -1.22
RPAIN-216ENST00000575599 TRBV7-7A0A0K0K1E9 115 aa7.41□□□□□ -1.22
RPAIN-216ENST00000575599 A0A087WSZ3 146 aa7.4□□□□□ -1.22
RPAIN-216ENST00000575599 K7ERU9 68 aa7.4□□□□□ -1.22
RPAIN-216ENST00000575599 ACYP1P07311 99 aa7.4□□□□□ -1.22
RPAIN-216ENST00000575599 SS18L2Q9UHA2 77 aa7.4□□□□□ -1.22
RPAIN-216ENST00000575599 MUC17Q685J3 4493 aa7.37□□□□□ -1.23
RPAIN-216ENST00000575599 FAM240AA0A1B0GVK7 77 aa7.36□□□□□ -1.23
RPAIN-216ENST00000575599 NREPQ16612 68 aa7.36□□□□□ -1.23
RPAIN-216ENST00000575599 UBL5Q9BZL1 73 aa7.36□□□□□ -1.23
RPAIN-216ENST00000575599 MUC2Q02817 5179 aa7.35□□□□□ -1.23
RPAIN-216ENST00000575599 Q5XG85 94 aa7.33□□□□□ -1.24
RPAIN-216ENST00000575599 LINC00846Q9NV44 126 aa7.33□□□□□ -1.24
RPAIN-216ENST00000575599 C1orf195Q5TG92 126 aa7.32□□□□□ -1.24
RPAIN-216ENST00000575599 C9orf92A6NGG3 77 aa7.31□□□□□ -1.24
RPAIN-216ENST00000575599 Q6ZVQ6 151 aa7.3□□□□□ -1.24
RPAIN-216ENST00000575599 A0A0U1RQV1 116 aa7.28□□□□□ -1.24
RPAIN-216ENST00000575599 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
RPAIN-216ENST00000575599 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
RPAIN-216ENST00000575599 J3KT08 172 aa7.26□□□□□ -1.25
RPAIN-216ENST00000575599 BPY2O14599 106 aa7.26□□□□□ -1.25
RPAIN-216ENST00000575599 SIGMAR1Q99720 223 aa7.26□□□□□ -1.25
RPAIN-216ENST00000575599 IGKV4-1P06312 121 aa7.25□□□□□ -1.25
RPAIN-216ENST00000575599 DEFB116Q30KQ4 102 aa7.25□□□□□ -1.25
RPAIN-216ENST00000575599 LINC00643Q86TS7 51 aa7.24□□□□□ -1.25
RPAIN-216ENST00000575599 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
RPAIN-216ENST00000575599 NDUFB1O75438 58 aa7.22□□□□□ -1.25
RPAIN-216ENST00000575599 ATP5EP2Q5VTU8 51 aa7.21□□□□□ -1.25
RPAIN-216ENST00000575599 IGKV3D-7A0A0C4DH55 119 aa7.2□□□□□ -1.26
RPAIN-216ENST00000575599 Q96NJ1 140 aa7.2□□□□□ -1.26
RPAIN-216ENST00000575599 CXCL6P80162 114 aa7.2□□□□□ -1.26
RPAIN-216ENST00000575599 FAT4Q6V0I7 4981 aa7.19□□□□□ -1.26
RPAIN-216ENST00000575599 KRTAP4-1Q9BYQ7 146 aa7.19□□□□□ -1.26
RPAIN-216ENST00000575599 A8MWP4 228 aa7.17□□□□□ -1.26
RPAIN-216ENST00000575599 PCOTHQ58A44 107 aa7.17□□□□□ -1.26
RPAIN-216ENST00000575599 DSCR10P59022 87 aa7.15□□□□□ -1.26
RPAIN-216ENST00000575599 HIST1H4AP62805 103 aaKnown RBP7.15□□□□□ -1.26
RPAIN-216ENST00000575599 IGHV6-1A0A0B4J1U7 121 aa7.14□□□□□ -1.27
RPAIN-216ENST00000575599 A0A1B0GVX0 72 aa7.13□□□□□ -1.27
RPAIN-216ENST00000575599 RPL37P61927 97 aaKnown RBP7.13□□□□□ -1.27
RPAIN-216ENST00000575599 Q8N9L7 120 aa7.13□□□□□ -1.27
RPAIN-216ENST00000575599 K7EQZ3 153 aa7.12□□□□□ -1.27
RPAIN-216ENST00000575599 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
RPAIN-216ENST00000575599 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
RPAIN-216ENST00000575599 MT-ATP8P03928 68 aa7.1□□□□□ -1.27
RPAIN-216ENST00000575599 LINC00313P59037 77 aa7.09□□□□□ -1.27
RPAIN-216ENST00000575599 IMUPQ9GZP8 106 aa7.08□□□□□ -1.28
RPAIN-216ENST00000575599 C8orf17Q9NRJ1 99 aa7.08□□□□□ -1.28
RPAIN-216ENST00000575599 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
RPAIN-216ENST00000575599 CASC2Q6XLA1 102 aa7.04□□□□□ -1.28
RPAIN-216ENST00000575599 Q75L30 129 aa7.04□□□□□ -1.28
RPAIN-216ENST00000575599 WFDC13Q8IUB5 93 aa7.04□□□□□ -1.28
RPAIN-216ENST00000575599 A0A087WVE0 104 aa7.03□□□□□ -1.28
RPAIN-216ENST00000575599 hDV103S1A0JD37 113 aa7.03□□□□□ -1.28
RPAIN-216ENST00000575599 MMP24-AS1A0A0U1RRL7 71 aa7.02□□□□□ -1.29
RPAIN-216ENST00000575599 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
RPAIN-216ENST00000575599 NOTCH2NLQ7Z3S9 236 aa7.01□□□□□ -1.29
RPAIN-216ENST00000575599 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
RPAIN-216ENST00000575599 SCGB1A1P11684 91 aa6.99□□□□□ -1.29
RPAIN-216ENST00000575599 C20orf166-AS1Q96NR2 134 aa6.99□□□□□ -1.29
RPAIN-216ENST00000575599 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
RPAIN-216ENST00000575599 NDUFS5O43920 106 aa6.98□□□□□ -1.29
RPAIN-216ENST00000575599 A8MUU9 505 aa6.96□□□□□ -1.29
RPAIN-216ENST00000575599 KRTAP19-2Q3LHN2 52 aa6.96□□□□□ -1.29
RPAIN-216ENST00000575599 FAM236AA0A1B0GUQ0 79 aa6.95□□□□□ -1.3
RPAIN-216ENST00000575599 FAM236BA0A1B0GV22 79 aa6.95□□□□□ -1.3
RPAIN-216ENST00000575599 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
RPAIN-216ENST00000575599 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
RPAIN-216ENST00000575599 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
RPAIN-216ENST00000575599 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
RPAIN-216ENST00000575599 TP53AIP1Q9HCN2 124 aa6.9□□□□□ -1.31
RPAIN-216ENST00000575599 MT1HP80294 61 aa6.89□□□□□ -1.31
RPAIN-216ENST00000575599 ATOX1O00244 68 aa6.88□□□□□ -1.31
RPAIN-216ENST00000575599 SMIM20Q8N5G0 67 aa6.88□□□□□ -1.31
RPAIN-216ENST00000575599 PCP4P48539 62 aa6.86□□□□□ -1.31
RPAIN-216ENST00000575599 UQCRQO14949 82 aa6.85□□□□□ -1.31
RPAIN-216ENST00000575599 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
RPAIN-216ENST00000575599 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
RPAIN-216ENST00000575599 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
RPAIN-216ENST00000575599 M0R2T5 61 aa6.81□□□□□ -1.32
RPAIN-216ENST00000575599 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
RPAIN-216ENST00000575599 MP68P56378 58 aa6.79□□□□□ -1.32
RPAIN-216ENST00000575599 H0Y9P7 68 aa6.78□□□□□ -1.32
RPAIN-216ENST00000575599 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
RPAIN-216ENST00000575599 ANAPC13Q9BS18 74 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms