RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 K7EP34 96 aa7.44□□□□□ -1.22
RPAIN-213ENST00000573577 Q6ZQT0 140 aa7.44□□□□□ -1.22
RPAIN-213ENST00000573577 OBSCN-AS1Q96MR7 158 aa7.44□□□□□ -1.22
RPAIN-213ENST00000573577 C14orf132Q9NPU4 83 aa7.44□□□□□ -1.22
RPAIN-213ENST00000573577 GTF2H5Q6ZYL4 71 aa7.43□□□□□ -1.22
RPAIN-213ENST00000573577 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
RPAIN-213ENST00000573577 Q96NJ1 140 aa7.41□□□□□ -1.22
RPAIN-213ENST00000573577 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
RPAIN-213ENST00000573577 SIGMAR1Q99720 223 aa7.39□□□□□ -1.23
RPAIN-213ENST00000573577 IGKV4-1P06312 121 aa7.38□□□□□ -1.23
RPAIN-213ENST00000573577 KRTAP19-4Q3LI73 84 aa7.38□□□□□ -1.23
RPAIN-213ENST00000573577 LINC00472Q9H8W2 130 aa7.38□□□□□ -1.23
RPAIN-213ENST00000573577 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
RPAIN-213ENST00000573577 A0A1B0GV90 55 aa7.36□□□□□ -1.23
RPAIN-213ENST00000573577 PRO0461Q9UI25 63 aa7.36□□□□□ -1.23
RPAIN-213ENST00000573577 KRTAP9-9Q9BYP9 154 aa7.35□□□□□ -1.23
RPAIN-213ENST00000573577 KRTAP9-4Q9BYQ2 154 aa7.35□□□□□ -1.23
RPAIN-213ENST00000573577 F8W1H4 67 aa7.34□□□□□ -1.23
RPAIN-213ENST00000573577 J3KT08 172 aa7.34□□□□□ -1.23
RPAIN-213ENST00000573577 DEFB116Q30KQ4 102 aa7.33□□□□□ -1.24
RPAIN-213ENST00000573577 NREPQ16612 68 aa7.31□□□□□ -1.24
RPAIN-213ENST00000573577 KRTAP4-1Q9BYQ7 146 aa7.31□□□□□ -1.24
RPAIN-213ENST00000573577 RPL37P61927 97 aaKnown RBP7.3□□□□□ -1.24
RPAIN-213ENST00000573577 NDUFB1O75438 58 aa7.29□□□□□ -1.24
RPAIN-213ENST00000573577 LINC00313P59037 77 aa7.29□□□□□ -1.24
RPAIN-213ENST00000573577 IGHV6-1A0A0B4J1U7 121 aa7.28□□□□□ -1.24
RPAIN-213ENST00000573577 Q75L30 129 aa7.28□□□□□ -1.24
RPAIN-213ENST00000573577 A0A1B0GVX0 72 aa7.27□□□□□ -1.25
RPAIN-213ENST00000573577 DSCR10P59022 87 aa7.27□□□□□ -1.25
RPAIN-213ENST00000573577 PCOTHQ58A44 107 aa7.27□□□□□ -1.25
RPAIN-213ENST00000573577 C8orf87E5RJ46 101 aa7.26□□□□□ -1.25
RPAIN-213ENST00000573577 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
RPAIN-213ENST00000573577 A8MWP4 228 aa7.24□□□□□ -1.25
RPAIN-213ENST00000573577 ETDBQ3ZM63 59 aa7.24□□□□□ -1.25
RPAIN-213ENST00000573577 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
RPAIN-213ENST00000573577 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
RPAIN-213ENST00000573577 A8MUU9 505 aa7.21□□□□□ -1.26
RPAIN-213ENST00000573577 BPY2O14599 106 aa7.2□□□□□ -1.26
RPAIN-213ENST00000573577 Q6ZVQ6 151 aa7.2□□□□□ -1.26
RPAIN-213ENST00000573577 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
RPAIN-213ENST00000573577 UBL5Q9BZL1 73 aa7.2□□□□□ -1.26
RPAIN-213ENST00000573577 KRTAP16-1A8MUX0 517 aa7.19□□□□□ -1.26
RPAIN-213ENST00000573577 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
RPAIN-213ENST00000573577 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
RPAIN-213ENST00000573577 LINC00846Q9NV44 126 aa7.17□□□□□ -1.26
RPAIN-213ENST00000573577 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
RPAIN-213ENST00000573577 C8orf17Q9NRJ1 99 aa7.16□□□□□ -1.26
RPAIN-213ENST00000573577 K7EQZ3 153 aa7.12□□□□□ -1.27
RPAIN-213ENST00000573577 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
RPAIN-213ENST00000573577 ACYP1P07311 99 aa7.11□□□□□ -1.27
RPAIN-213ENST00000573577 KRTAP19-2Q3LHN2 52 aa7.11□□□□□ -1.27
RPAIN-213ENST00000573577 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
RPAIN-213ENST00000573577 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.27
RPAIN-213ENST00000573577 TMEM254Q8TBM7 123 aa7.09□□□□□ -1.27
RPAIN-213ENST00000573577 FAM240AA0A1B0GVK7 77 aa7.08□□□□□ -1.28
RPAIN-213ENST00000573577 hDV103S1A0JD37 113 aa7.08□□□□□ -1.28
RPAIN-213ENST00000573577 MRPL34Q9BQ48 92 aaKnown RBP7.07□□□□□ -1.28
RPAIN-213ENST00000573577 CXCL6P80162 114 aa7.06□□□□□ -1.28
RPAIN-213ENST00000573577 Q8N9L7 120 aa7.06□□□□□ -1.28
RPAIN-213ENST00000573577 ZCCHC13Q8WW36 166 aaKnown RBP7.05□□□□□ -1.28
RPAIN-213ENST00000573577 CASC2Q6XLA1 102 aa7.03□□□□□ -1.28
RPAIN-213ENST00000573577 NDUFS5O43920 106 aa7.02□□□□□ -1.29
RPAIN-213ENST00000573577 MT1HP80294 61 aa7.02□□□□□ -1.29
RPAIN-213ENST00000573577 LCE1DQ5T752 114 aa7.02□□□□□ -1.29
RPAIN-213ENST00000573577 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
RPAIN-213ENST00000573577 HCG22E2RYF7 251 aa7□□□□□ -1.29
RPAIN-213ENST00000573577 COX6B2Q6YFQ2 88 aa7□□□□□ -1.29
RPAIN-213ENST00000573577 J3QR89 54 aa6.99□□□□□ -1.29
RPAIN-213ENST00000573577 ATP5EP2Q5VTU8 51 aa6.99□□□□□ -1.29
RPAIN-213ENST00000573577 FLGP20930 4061 aaPredicted RBP6.99□□□□□ -1.29
RPAIN-213ENST00000573577 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.3
RPAIN-213ENST00000573577 K7ERU9 68 aa6.95□□□□□ -1.3
RPAIN-213ENST00000573577 SPINK7P58062 85 aa6.93□□□□□ -1.3
RPAIN-213ENST00000573577 LINC00643Q86TS7 51 aa6.93□□□□□ -1.3
RPAIN-213ENST00000573577 RBM12B-AS1Q9P1G2 102 aa6.91□□□□□ -1.3
RPAIN-213ENST00000573577 M0R2T5 61 aa6.9□□□□□ -1.3
RPAIN-213ENST00000573577 HRES1P13985 223 aa6.89□□□□□ -1.31
RPAIN-213ENST00000573577 HIST1H4AP62805 103 aaKnown RBP6.89□□□□□ -1.31
RPAIN-213ENST00000573577 FAM236DA0A1B0GTK5 79 aa6.88□□□□□ -1.31
RPAIN-213ENST00000573577 FAM236CP0DP71 79 aa6.88□□□□□ -1.31
RPAIN-213ENST00000573577 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
RPAIN-213ENST00000573577 PCP4P48539 62 aa6.87□□□□□ -1.31
RPAIN-213ENST00000573577 KRTAP10-6P60371 365 aaPredicted RBP6.86□□□□□ -1.31
RPAIN-213ENST00000573577 Q5W150 140 aa6.86□□□□□ -1.31
RPAIN-213ENST00000573577 MPLKIPQ8TAP9 179 aa6.86□□□□□ -1.31
RPAIN-213ENST00000573577 C7orf65Q6ZTY9 151 aa6.84□□□□□ -1.31
RPAIN-213ENST00000573577 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
RPAIN-213ENST00000573577 IGKV2D-30A0A075B6S6 120 aa6.83□□□□□ -1.32
RPAIN-213ENST00000573577 IGKV2-30P06310 120 aa6.83□□□□□ -1.32
RPAIN-213ENST00000573577 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
RPAIN-213ENST00000573577 A0A087WVE0 104 aa6.78□□□□□ -1.32
RPAIN-213ENST00000573577 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
RPAIN-213ENST00000573577 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
RPAIN-213ENST00000573577 TRAV22A0A0B4J277 110 aa6.74□□□□□ -1.33
RPAIN-213ENST00000573577 UQCRQO14949 82 aa6.74□□□□□ -1.33
RPAIN-213ENST00000573577 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
RPAIN-213ENST00000573577 ATOX1O00244 68 aa6.7□□□□□ -1.34
RPAIN-213ENST00000573577 IMUPQ9GZP8 106 aa6.7□□□□□ -1.34
RPAIN-213ENST00000573577 LOC101927531A0A1B0GV80 90 aa6.68□□□□□ -1.34
RPAIN-213ENST00000573577 H0Y9P7 68 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms