RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
CHD3-213ENST00000571249 FAM19A5Q7Z5A7 132 aaPredicted RBP3.84□□□□□ -1.79
CHD3-213ENST00000571249 SIGMAR1Q99720 223 aa3.84□□□□□ -1.79
CHD3-213ENST00000571249 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
CHD3-213ENST00000571249 SCGB1A1P11684 91 aa3.82□□□□□ -1.8
CHD3-213ENST00000571249 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
CHD3-213ENST00000571249 Q6ZQY7 126 aa3.81□□□□□ -1.8
CHD3-213ENST00000571249 Q8N377 158 aa3.81□□□□□ -1.8
CHD3-213ENST00000571249 LOC110117498A0A087WWA1 95 aa3.8□□□□□ -1.8
CHD3-213ENST00000571249 CCKP06307 115 aa3.8□□□□□ -1.8
CHD3-213ENST00000571249 Q6Q795 121 aa3.8□□□□□ -1.8
CHD3-213ENST00000571249 COX6B2Q6YFQ2 88 aa3.8□□□□□ -1.8
CHD3-213ENST00000571249 Q6ZRX8 168 aa3.8□□□□□ -1.8
CHD3-213ENST00000571249 IGKV2D-30A0A075B6S6 120 aa3.79□□□□□ -1.8
CHD3-213ENST00000571249 NDUFS5O43920 106 aa3.79□□□□□ -1.8
CHD3-213ENST00000571249 MT-ATP8P03928 68 aa3.79□□□□□ -1.8
CHD3-213ENST00000571249 PDE6GP18545 87 aa3.79□□□□□ -1.8
CHD3-213ENST00000571249 C14orf132Q9NPU4 83 aa3.79□□□□□ -1.8
CHD3-213ENST00000571249 IGLV5-48A0A075B6I7 105 aa3.78□□□□□ -1.8
CHD3-213ENST00000571249 SMIM26A0A096LP01 95 aa3.78□□□□□ -1.8
CHD3-213ENST00000571249 PSPHP1O15172 72 aa3.78□□□□□ -1.8
CHD3-213ENST00000571249 RBM3P98179 157 aaKnown RBP3.78□□□□□ -1.8
CHD3-213ENST00000571249 PCOTHQ58A44 107 aa3.78□□□□□ -1.8
CHD3-213ENST00000571249 Q6ZQT0 140 aa3.78□□□□□ -1.8
CHD3-213ENST00000571249 LINC00643Q86TS7 51 aa3.78□□□□□ -1.8
CHD3-213ENST00000571249 LINC00846Q9NV44 126 aa3.78□□□□□ -1.8
CHD3-213ENST00000571249 TRBV7-4A0A0J9YYF1 115 aa3.77□□□□□ -1.81
CHD3-213ENST00000571249 TRBV7-7A0A0K0K1E9 115 aa3.77□□□□□ -1.81
CHD3-213ENST00000571249 ETDCA0A1B0GVM5 59 aa3.77□□□□□ -1.81
CHD3-213ENST00000571249 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
CHD3-213ENST00000571249 FAM229BQ4G0N7 80 aa3.77□□□□□ -1.81
CHD3-213ENST00000571249 Q9BRP9 147 aa3.77□□□□□ -1.81
CHD3-213ENST00000571249 IMUPQ9GZP8 106 aa3.77□□□□□ -1.81
CHD3-213ENST00000571249 C4orf26Q17RF5 130 aa3.76□□□□□ -1.81
CHD3-213ENST00000571249 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
CHD3-213ENST00000571249 SMCR5Q8TEV8 140 aa3.76□□□□□ -1.81
CHD3-213ENST00000571249 KRTAP9-3Q9BYQ3 159 aa3.76□□□□□ -1.81
CHD3-213ENST00000571249 LAMTOR3Q9UHA4 124 aa3.76□□□□□ -1.81
CHD3-213ENST00000571249 PRO0628Q9UI54 55 aa3.76□□□□□ -1.81
CHD3-213ENST00000571249 A0A1B0GW54 56 aa3.75□□□□□ -1.81
CHD3-213ENST00000571249 Q6JHZ5 121 aa3.75□□□□□ -1.81
CHD3-213ENST00000571249 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
CHD3-213ENST00000571249 SPAG11AQ6PDA7 123 aa3.74□□□□□ -1.81
CHD3-213ENST00000571249 DSCR8Q96T75 97 aa3.74□□□□□ -1.81
CHD3-213ENST00000571249 BCE1O60756 84 aa3.73□□□□□ -1.81
CHD3-213ENST00000571249 ERC2-IT1O76042 136 aa3.73□□□□□ -1.81
CHD3-213ENST00000571249 SPRR1BP22528 89 aa3.73□□□□□ -1.81
CHD3-213ENST00000571249 ATP5EP2Q5VTU8 51 aa3.73□□□□□ -1.81
CHD3-213ENST00000571249 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
CHD3-213ENST00000571249 C3orf22Q8N5N4 141 aa3.73□□□□□ -1.81
CHD3-213ENST00000571249 MT2AP02795 61 aa3.72□□□□□ -1.81
CHD3-213ENST00000571249 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
CHD3-213ENST00000571249 ST20-AS1Q8NBB2 130 aa3.71□□□□□ -1.82
CHD3-213ENST00000571249 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
CHD3-213ENST00000571249 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
CHD3-213ENST00000571249 MT1FP04733 61 aa3.7□□□□□ -1.82
CHD3-213ENST00000571249 HIST1H4AP62805 103 aaKnown RBP3.7□□□□□ -1.82
CHD3-213ENST00000571249 UBL5Q9BZL1 73 aa3.7□□□□□ -1.82
CHD3-213ENST00000571249 IGHV6-1A0A0B4J1U7 121 aa3.69□□□□□ -1.82
CHD3-213ENST00000571249 A0A1B0GV72 72 aa3.69□□□□□ -1.82
CHD3-213ENST00000571249 PRLHP81277 87 aa3.69□□□□□ -1.82
CHD3-213ENST00000571249 C1orf195Q5TG92 126 aa3.69□□□□□ -1.82
CHD3-213ENST00000571249 DEFB105AQ8NG35 78 aa3.69□□□□□ -1.82
CHD3-213ENST00000571249 SPRR4Q96PI1 79 aa3.69□□□□□ -1.82
CHD3-213ENST00000571249 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
CHD3-213ENST00000571249 Q8N9P0 234 aaPredicted RBP3.68□□□□□ -1.82
CHD3-213ENST00000571249 HIGD2AQ9BW72 106 aa3.68□□□□□ -1.82
CHD3-213ENST00000571249 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
CHD3-213ENST00000571249 UBE2AP49459 152 aa3.67□□□□□ -1.82
CHD3-213ENST00000571249 LINC00483Q53H64 154 aa3.67□□□□□ -1.82
CHD3-213ENST00000571249 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
CHD3-213ENST00000571249 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
CHD3-213ENST00000571249 IGKV3D-7A0A0C4DH55 119 aa3.66□□□□□ -1.82
CHD3-213ENST00000571249 FAM236AA0A1B0GUQ0 79 aa3.65□□□□□ -1.83
CHD3-213ENST00000571249 FAM236BA0A1B0GV22 79 aa3.65□□□□□ -1.83
CHD3-213ENST00000571249 C8orf87E5RJ46 101 aa3.65□□□□□ -1.83
CHD3-213ENST00000571249 F8WEM9 126 aa3.65□□□□□ -1.83
CHD3-213ENST00000571249 SPINK1P00995 79 aa3.65□□□□□ -1.83
CHD3-213ENST00000571249 IGFL1Q6UW32 110 aa3.65□□□□□ -1.83
CHD3-213ENST00000571249 ANAPC13Q9BS18 74 aa3.65□□□□□ -1.83
CHD3-213ENST00000571249 NREPQ16612 68 aa3.64□□□□□ -1.83
CHD3-213ENST00000571249 ZNF706Q9Y5V0 76 aaPredicted RBP3.64□□□□□ -1.83
CHD3-213ENST00000571249 ATOX1O00244 68 aa3.63□□□□□ -1.83
CHD3-213ENST00000571249 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
CHD3-213ENST00000571249 RBM12B-AS1Q9P1G2 102 aa3.63□□□□□ -1.83
CHD3-213ENST00000571249 A0A087WVE0 104 aa3.62□□□□□ -1.83
CHD3-213ENST00000571249 C9orf92A6NGG3 77 aa3.61□□□□□ -1.83
CHD3-213ENST00000571249 BPY2O14599 106 aa3.61□□□□□ -1.83
CHD3-213ENST00000571249 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
CHD3-213ENST00000571249 IGKV4-1P06312 121 aa3.6□□□□□ -1.83
CHD3-213ENST00000571249 UQCRQO14949 82 aa3.59□□□□□ -1.83
CHD3-213ENST00000571249 COX7CP15954 63 aa3.59□□□□□ -1.83
CHD3-213ENST00000571249 MP68P56378 58 aa3.59□□□□□ -1.83
CHD3-213ENST00000571249 DSCR10P59022 87 aa3.59□□□□□ -1.83
CHD3-213ENST00000571249 SMIM20Q8N5G0 67 aa3.59□□□□□ -1.83
CHD3-213ENST00000571249 SERP2Q8N6R1 65 aa3.59□□□□□ -1.83
CHD3-213ENST00000571249 A0A087WSZ3 146 aa3.58□□□□□ -1.84
CHD3-213ENST00000571249 A0A0G2JQZ4 141 aa3.58□□□□□ -1.84
CHD3-213ENST00000571249 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
CHD3-213ENST00000571249 LINC00472Q9H8W2 130 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms