RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 Q75L30 129 aa7.35□□□□□ -1.23
HERPUD1-218ENST00000569569 VPS25Q9BRG1 176 aa7.35□□□□□ -1.23
HERPUD1-218ENST00000569569 TRBV20-1A0A075B6N2 111 aa7.34□□□□□ -1.23
HERPUD1-218ENST00000569569 IGKV4-1P06312 121 aa7.34□□□□□ -1.23
HERPUD1-218ENST00000569569 JMJD7-PLA2G4BH0Y9G9 81 aa7.33□□□□□ -1.24
HERPUD1-218ENST00000569569 SIGMAR1Q99720 223 aa7.33□□□□□ -1.24
HERPUD1-218ENST00000569569 LINC00472Q9H8W2 130 aa7.33□□□□□ -1.24
HERPUD1-218ENST00000569569 ATP11AUNQ6ZP68 121 aa7.32□□□□□ -1.24
HERPUD1-218ENST00000569569 C9orf118A6NHY6 69 aa7.31□□□□□ -1.24
HERPUD1-218ENST00000569569 DSCR10P59022 87 aa7.3□□□□□ -1.24
HERPUD1-218ENST00000569569 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
HERPUD1-218ENST00000569569 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
HERPUD1-218ENST00000569569 TAX1BP3O14907 124 aa7.29□□□□□ -1.24
HERPUD1-218ENST00000569569 LINC00313P59037 77 aa7.29□□□□□ -1.24
HERPUD1-218ENST00000569569 A8MUU9 505 aa7.28□□□□□ -1.24
HERPUD1-218ENST00000569569 LOC110117498A0A087WWA1 95 aa7.27□□□□□ -1.25
HERPUD1-218ENST00000569569 PDE6GP18545 87 aa7.27□□□□□ -1.25
HERPUD1-218ENST00000569569 KRTAP19-2Q3LHN2 52 aa7.27□□□□□ -1.25
HERPUD1-218ENST00000569569 Q6ZQT0 140 aa7.27□□□□□ -1.25
HERPUD1-218ENST00000569569 A0A1B0GW54 56 aa7.26□□□□□ -1.25
HERPUD1-218ENST00000569569 A0A1W2PPM0 123 aa7.26□□□□□ -1.25
HERPUD1-218ENST00000569569 C14orf132Q9NPU4 83 aa7.24□□□□□ -1.25
HERPUD1-218ENST00000569569 IGHV6-1A0A0B4J1U7 121 aa7.23□□□□□ -1.25
HERPUD1-218ENST00000569569 J3KT08 172 aa7.23□□□□□ -1.25
HERPUD1-218ENST00000569569 NOTCH2NLQ7Z3S9 236 aa7.23□□□□□ -1.25
HERPUD1-218ENST00000569569 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
HERPUD1-218ENST00000569569 H3BT86 120 aa7.22□□□□□ -1.25
HERPUD1-218ENST00000569569 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
HERPUD1-218ENST00000569569 A0A1B0GVX0 72 aa7.21□□□□□ -1.26
HERPUD1-218ENST00000569569 C8orf87E5RJ46 101 aa7.2□□□□□ -1.26
HERPUD1-218ENST00000569569 MTURNQ8N3F0 131 aa7.18□□□□□ -1.26
HERPUD1-218ENST00000569569 NDUFB1O75438 58 aa7.17□□□□□ -1.26
HERPUD1-218ENST00000569569 MT1HP80294 61 aa7.17□□□□□ -1.26
HERPUD1-218ENST00000569569 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
HERPUD1-218ENST00000569569 SPCS1Q9Y6A9 102 aa7.17□□□□□ -1.26
HERPUD1-218ENST00000569569 COL5A1-AS1Q5SY13 56 aa7.16□□□□□ -1.26
HERPUD1-218ENST00000569569 NREPQ16612 68 aa7.15□□□□□ -1.26
HERPUD1-218ENST00000569569 A8MWP4 228 aa7.13□□□□□ -1.27
HERPUD1-218ENST00000569569 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
HERPUD1-218ENST00000569569 IGKV3D-7A0A0C4DH55 119 aa7.1□□□□□ -1.27
HERPUD1-218ENST00000569569 C8orf17Q9NRJ1 99 aa7.09□□□□□ -1.27
HERPUD1-218ENST00000569569 FLGP20930 4061 aaPredicted RBP7.09□□□□□ -1.27
HERPUD1-218ENST00000569569 PRR15Q8IV56 129 aa7.08□□□□□ -1.28
HERPUD1-218ENST00000569569 M0R2T5 61 aa7.07□□□□□ -1.28
HERPUD1-218ENST00000569569 Q8N9P0 234 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-218ENST00000569569 PCP4L1A6NKN8 68 aa7.06□□□□□ -1.28
HERPUD1-218ENST00000569569 K7EP34 96 aa7.06□□□□□ -1.28
HERPUD1-218ENST00000569569 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
HERPUD1-218ENST00000569569 ZCCHC13Q8WW36 166 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-218ENST00000569569 PRO0461Q9UI25 63 aa7.05□□□□□ -1.28
HERPUD1-218ENST00000569569 Q6ZVQ6 151 aa7.04□□□□□ -1.28
HERPUD1-218ENST00000569569 BPY2O14599 106 aa7.02□□□□□ -1.29
HERPUD1-218ENST00000569569 KRTAP10-6P60371 365 aaPredicted RBP7.02□□□□□ -1.29
HERPUD1-218ENST00000569569 GTF2H5Q6ZYL4 71 aa7.02□□□□□ -1.29
HERPUD1-218ENST00000569569 K7EQZ3 153 aa7.01□□□□□ -1.29
HERPUD1-218ENST00000569569 MMP24-AS1A0A0U1RRL7 71 aa7□□□□□ -1.29
HERPUD1-218ENST00000569569 HRES1P13985 223 aa7□□□□□ -1.29
HERPUD1-218ENST00000569569 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
HERPUD1-218ENST00000569569 RBM12B-AS1Q9P1G2 102 aa7□□□□□ -1.29
HERPUD1-218ENST00000569569 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
HERPUD1-218ENST00000569569 MPLKIPQ8TAP9 179 aa6.98□□□□□ -1.29
HERPUD1-218ENST00000569569 FAM236DA0A1B0GTK5 79 aa6.97□□□□□ -1.29
HERPUD1-218ENST00000569569 hDV103S1A0JD37 113 aa6.97□□□□□ -1.29
HERPUD1-218ENST00000569569 FAM236CP0DP71 79 aa6.97□□□□□ -1.29
HERPUD1-218ENST00000569569 F8W1H4 67 aa6.96□□□□□ -1.3
HERPUD1-218ENST00000569569 SPINK7P58062 85 aa6.96□□□□□ -1.3
HERPUD1-218ENST00000569569 UBL5Q9BZL1 73 aa6.95□□□□□ -1.3
HERPUD1-218ENST00000569569 LINC00846Q9NV44 126 aa6.94□□□□□ -1.3
HERPUD1-218ENST00000569569 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
HERPUD1-218ENST00000569569 NDUFS5O43920 106 aa6.92□□□□□ -1.3
HERPUD1-218ENST00000569569 Q8N9L7 120 aa6.91□□□□□ -1.3
HERPUD1-218ENST00000569569 ETDBQ3ZM63 59 aa6.9□□□□□ -1.3
HERPUD1-218ENST00000569569 CASC2Q6XLA1 102 aa6.89□□□□□ -1.31
HERPUD1-218ENST00000569569 WFDC13Q8IUB5 93 aa6.89□□□□□ -1.31
HERPUD1-218ENST00000569569 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
HERPUD1-218ENST00000569569 HCG22E2RYF7 251 aa6.84□□□□□ -1.31
HERPUD1-218ENST00000569569 KRTAP9-7A8MTY7 169 aa6.82□□□□□ -1.32
HERPUD1-218ENST00000569569 Q5W150 140 aa6.82□□□□□ -1.32
HERPUD1-218ENST00000569569 CXCL6P80162 114 aa6.81□□□□□ -1.32
HERPUD1-218ENST00000569569 KRTAP9-8Q9BYQ0 159 aa6.81□□□□□ -1.32
HERPUD1-218ENST00000569569 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
HERPUD1-218ENST00000569569 IGKV2D-30A0A075B6S6 120 aa6.78□□□□□ -1.32
HERPUD1-218ENST00000569569 IGKV2-30P06310 120 aa6.78□□□□□ -1.32
HERPUD1-218ENST00000569569 C7orf65Q6ZTY9 151 aa6.78□□□□□ -1.32
HERPUD1-218ENST00000569569 FSIP2Q5CZC0 6907 aa6.78□□□□□ -1.32
HERPUD1-218ENST00000569569 ACYP1P07311 99 aa6.76□□□□□ -1.33
HERPUD1-218ENST00000569569 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
HERPUD1-218ENST00000569569 FAM240AA0A1B0GVK7 77 aa6.72□□□□□ -1.33
HERPUD1-218ENST00000569569 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
HERPUD1-218ENST00000569569 MT2AP02795 61 aa6.71□□□□□ -1.34
HERPUD1-218ENST00000569569 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.34
HERPUD1-218ENST00000569569 A0A1B0GV90 55 aa6.67□□□□□ -1.34
HERPUD1-218ENST00000569569 MT1FP04733 61 aa6.66□□□□□ -1.34
HERPUD1-218ENST00000569569 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
HERPUD1-218ENST00000569569 ATP5EP2Q5VTU8 51 aa6.66□□□□□ -1.34
HERPUD1-218ENST00000569569 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
HERPUD1-218ENST00000569569 HIST1H4AP62805 103 aaKnown RBP6.62□□□□□ -1.35
HERPUD1-218ENST00000569569 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
HERPUD1-218ENST00000569569 LINC00643Q86TS7 51 aa6.59□□□□□ -1.35
HERPUD1-218ENST00000569569 TRAV22A0A0B4J277 110 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms