RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 IGKV4-1P06312 121 aa4.83□□□□□ -1.64
GTF3C1-210ENST00000569394 MTURNQ8N3F0 131 aa4.83□□□□□ -1.64
GTF3C1-210ENST00000569394 DSCR8Q96T75 97 aa4.83□□□□□ -1.64
GTF3C1-210ENST00000569394 C9JAW5 83 aa4.82□□□□□ -1.64
GTF3C1-210ENST00000569394 TRBV7-4A0A0J9YYF1 115 aa4.81□□□□□ -1.64
GTF3C1-210ENST00000569394 IGHV6-1A0A0B4J1U7 121 aa4.79□□□□□ -1.64
GTF3C1-210ENST00000569394 TAX1BP3O14907 124 aa4.79□□□□□ -1.64
GTF3C1-210ENST00000569394 LYRM7Q5U5X0 104 aa4.79□□□□□ -1.64
GTF3C1-210ENST00000569394 ATP11AUNQ6ZP68 121 aa4.79□□□□□ -1.64
GTF3C1-210ENST00000569394 C14orf132Q9NPU4 83 aa4.79□□□□□ -1.64
GTF3C1-210ENST00000569394 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
GTF3C1-210ENST00000569394 PCP4L1A6NKN8 68 aa4.77□□□□□ -1.65
GTF3C1-210ENST00000569394 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
GTF3C1-210ENST00000569394 TRBV20-1A0A075B6N2 111 aa4.76□□□□□ -1.65
GTF3C1-210ENST00000569394 A0A1W2PPM0 123 aa4.76□□□□□ -1.65
GTF3C1-210ENST00000569394 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
GTF3C1-210ENST00000569394 LINC00313P59037 77 aa4.76□□□□□ -1.65
GTF3C1-210ENST00000569394 JMJD7-PLA2G4BH0Y9G9 81 aa4.75□□□□□ -1.65
GTF3C1-210ENST00000569394 Q6ZQT0 140 aa4.75□□□□□ -1.65
GTF3C1-210ENST00000569394 Q75L30 129 aa4.75□□□□□ -1.65
GTF3C1-210ENST00000569394 COX6B2Q6YFQ2 88 aa4.74□□□□□ -1.65
GTF3C1-210ENST00000569394 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
GTF3C1-210ENST00000569394 SPCS1Q9Y6A9 102 aa4.73□□□□□ -1.65
GTF3C1-210ENST00000569394 C20orf166-AS1Q96NR2 134 aa4.72□□□□□ -1.65
GTF3C1-210ENST00000569394 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
GTF3C1-210ENST00000569394 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
GTF3C1-210ENST00000569394 LOC110117498A0A087WWA1 95 aa4.71□□□□□ -1.66
GTF3C1-210ENST00000569394 A8MUU9 505 aa4.71□□□□□ -1.66
GTF3C1-210ENST00000569394 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
GTF3C1-210ENST00000569394 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
GTF3C1-210ENST00000569394 A0A1B0GVX0 72 aa4.7□□□□□ -1.66
GTF3C1-210ENST00000569394 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
GTF3C1-210ENST00000569394 COL5A1-AS1Q5SY13 56 aa4.7□□□□□ -1.66
GTF3C1-210ENST00000569394 H3BT86 120 aa4.69□□□□□ -1.66
GTF3C1-210ENST00000569394 M0R2T5 61 aa4.68□□□□□ -1.66
GTF3C1-210ENST00000569394 NDUFB1O75438 58 aa4.68□□□□□ -1.66
GTF3C1-210ENST00000569394 PDE6GP18545 87 aa4.68□□□□□ -1.66
GTF3C1-210ENST00000569394 MT1HP80294 61 aa4.68□□□□□ -1.66
GTF3C1-210ENST00000569394 NREPQ16612 68 aa4.68□□□□□ -1.66
GTF3C1-210ENST00000569394 J3KT08 172 aa4.67□□□□□ -1.66
GTF3C1-210ENST00000569394 MPLKIPQ8TAP9 179 aa4.67□□□□□ -1.66
GTF3C1-210ENST00000569394 C8orf87E5RJ46 101 aa4.66□□□□□ -1.66
GTF3C1-210ENST00000569394 FSIP2Q5CZC0 6907 aa4.66□□□□□ -1.66
GTF3C1-210ENST00000569394 IGKV3D-7A0A0C4DH55 119 aa4.65□□□□□ -1.67
GTF3C1-210ENST00000569394 C8orf17Q9NRJ1 99 aa4.65□□□□□ -1.67
GTF3C1-210ENST00000569394 A8MWP4 228 aa4.64□□□□□ -1.67
GTF3C1-210ENST00000569394 K7EP34 96 aa4.64□□□□□ -1.67
GTF3C1-210ENST00000569394 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
GTF3C1-210ENST00000569394 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
GTF3C1-210ENST00000569394 FAM236DA0A1B0GTK5 79 aa4.63□□□□□ -1.67
GTF3C1-210ENST00000569394 FAM236CP0DP71 79 aa4.63□□□□□ -1.67
GTF3C1-210ENST00000569394 A0A1B0GW54 56 aa4.61□□□□□ -1.67
GTF3C1-210ENST00000569394 K7EQZ3 153 aa4.61□□□□□ -1.67
GTF3C1-210ENST00000569394 NDUFS5O43920 106 aa4.61□□□□□ -1.67
GTF3C1-210ENST00000569394 PRR15Q8IV56 129 aa4.61□□□□□ -1.67
GTF3C1-210ENST00000569394 Q8N9L7 120 aa4.61□□□□□ -1.67
GTF3C1-210ENST00000569394 PRO0461Q9UI25 63 aa4.61□□□□□ -1.67
GTF3C1-210ENST00000569394 BPY2O14599 106 aa4.6□□□□□ -1.67
GTF3C1-210ENST00000569394 Q6ZVQ6 151 aa4.6□□□□□ -1.67
GTF3C1-210ENST00000569394 ZCCHC13Q8WW36 166 aaKnown RBP4.6□□□□□ -1.67
GTF3C1-210ENST00000569394 GTF2H5Q6ZYL4 71 aa4.59□□□□□ -1.67
GTF3C1-210ENST00000569394 WFDC13Q8IUB5 93 aa4.59□□□□□ -1.67
GTF3C1-210ENST00000569394 MMP24-AS1A0A0U1RRL7 71 aa4.58□□□□□ -1.68
GTF3C1-210ENST00000569394 KRTAP10-6P60371 365 aaPredicted RBP4.58□□□□□ -1.68
GTF3C1-210ENST00000569394 MRPL34Q9BQ48 92 aaKnown RBP4.57□□□□□ -1.68
GTF3C1-210ENST00000569394 LINC00846Q9NV44 126 aa4.57□□□□□ -1.68
GTF3C1-210ENST00000569394 FLGP20930 4061 aaPredicted RBP4.56□□□□□ -1.68
GTF3C1-210ENST00000569394 hDV103S1A0JD37 113 aa4.56□□□□□ -1.68
GTF3C1-210ENST00000569394 HRES1P13985 223 aa4.56□□□□□ -1.68
GTF3C1-210ENST00000569394 SPINK7P58062 85 aa4.56□□□□□ -1.68
GTF3C1-210ENST00000569394 ETDBQ3ZM63 59 aa4.56□□□□□ -1.68
GTF3C1-210ENST00000569394 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
GTF3C1-210ENST00000569394 TMEM254Q8TBM7 123 aa4.55□□□□□ -1.68
GTF3C1-210ENST00000569394 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
GTF3C1-210ENST00000569394 UBL5Q9BZL1 73 aa4.54□□□□□ -1.68
GTF3C1-210ENST00000569394 F8W1H4 67 aa4.53□□□□□ -1.68
GTF3C1-210ENST00000569394 CASC2Q6XLA1 102 aa4.52□□□□□ -1.69
GTF3C1-210ENST00000569394 HCG22E2RYF7 251 aa4.51□□□□□ -1.69
GTF3C1-210ENST00000569394 IGKV2D-30A0A075B6S6 120 aa4.5□□□□□ -1.69
GTF3C1-210ENST00000569394 IGKV2-30P06310 120 aa4.5□□□□□ -1.69
GTF3C1-210ENST00000569394 Q5W150 140 aa4.49□□□□□ -1.69
GTF3C1-210ENST00000569394 A0A1B0GV90 55 aa4.47□□□□□ -1.69
GTF3C1-210ENST00000569394 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
GTF3C1-210ENST00000569394 CXCL6P80162 114 aa4.41□□□□□ -1.7
GTF3C1-210ENST00000569394 C4orf26Q17RF5 130 aa4.41□□□□□ -1.7
GTF3C1-210ENST00000569394 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
GTF3C1-210ENST00000569394 C7orf65Q6ZTY9 151 aa4.41□□□□□ -1.7
GTF3C1-210ENST00000569394 HIST1H4AP62805 103 aaKnown RBP4.4□□□□□ -1.71
GTF3C1-210ENST00000569394 MT2AP02795 61 aa4.39□□□□□ -1.71
GTF3C1-210ENST00000569394 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
GTF3C1-210ENST00000569394 MT1FP04733 61 aa4.37□□□□□ -1.71
GTF3C1-210ENST00000569394 ACYP1P07311 99 aa4.37□□□□□ -1.71
GTF3C1-210ENST00000569394 H1FX-AS1Q4G0G2 97 aa4.37□□□□□ -1.71
GTF3C1-210ENST00000569394 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
GTF3C1-210ENST00000569394 A0A087WVE0 104 aa4.35□□□□□ -1.71
GTF3C1-210ENST00000569394 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
GTF3C1-210ENST00000569394 FAM240AA0A1B0GVK7 77 aa4.33□□□□□ -1.72
GTF3C1-210ENST00000569394 TP53AIP1Q9HCN2 124 aa4.33□□□□□ -1.72
GTF3C1-210ENST00000569394 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
GTF3C1-210ENST00000569394 C5orf47Q569G3 176 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms