RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 UBE2V1Q13404 147 aa7.3□□□□□ -1.24
USB1-214ENST00000568848 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
USB1-214ENST00000568848 KRTAP19-6Q3LI70 58 aa7.3□□□□□ -1.24
USB1-214ENST00000568848 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
USB1-214ENST00000568848 MPLKIPQ8TAP9 179 aa7.29□□□□□ -1.24
USB1-214ENST00000568848 NOTCH2NLQ7Z3S9 236 aa7.28□□□□□ -1.24
USB1-214ENST00000568848 NAA38Q9BRA0 125 aaKnown RBP7.28□□□□□ -1.24
USB1-214ENST00000568848 BAALC-AS2P0C853 105 aa7.27□□□□□ -1.25
USB1-214ENST00000568848 VPS25Q9BRG1 176 aa7.27□□□□□ -1.25
USB1-214ENST00000568848 LINC00472Q9H8W2 130 aa7.26□□□□□ -1.25
USB1-214ENST00000568848 NEBP20929 6669 aa7.25□□□□□ -1.25
USB1-214ENST00000568848 LINC00313P59037 77 aa7.25□□□□□ -1.25
USB1-214ENST00000568848 RBM3P98179 157 aaKnown RBP7.25□□□□□ -1.25
USB1-214ENST00000568848 M0R143 59 aa7.23□□□□□ -1.25
USB1-214ENST00000568848 DSCR8Q96T75 97 aa7.22□□□□□ -1.25
USB1-214ENST00000568848 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
USB1-214ENST00000568848 SMIM6P0DI80 62 aa7.21□□□□□ -1.26
USB1-214ENST00000568848 IGHV6-1A0A0B4J1U7 121 aa7.2□□□□□ -1.26
USB1-214ENST00000568848 KRTAP6-3Q3LI67 103 aa7.2□□□□□ -1.26
USB1-214ENST00000568848 C9JAW5 83 aa7.19□□□□□ -1.26
USB1-214ENST00000568848 ATXN8Q156A1 80 aa7.19□□□□□ -1.26
USB1-214ENST00000568848 Q8N9P0 234 aaPredicted RBP7.17□□□□□ -1.26
USB1-214ENST00000568848 BATFQ16520 125 aa7.16□□□□□ -1.26
USB1-214ENST00000568848 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
USB1-214ENST00000568848 Q6ZQT0 140 aa7.14□□□□□ -1.27
USB1-214ENST00000568848 TSTD3H0UI37 97 aa7.13□□□□□ -1.27
USB1-214ENST00000568848 LINC00846Q9NV44 126 aa7.13□□□□□ -1.27
USB1-214ENST00000568848 LOC105371267A0A1B0GV96 52 aa7.11□□□□□ -1.27
USB1-214ENST00000568848 JMJD7-PLA2G4BH0Y9G9 81 aa7.11□□□□□ -1.27
USB1-214ENST00000568848 C14orf132Q9NPU4 83 aa7.11□□□□□ -1.27
USB1-214ENST00000568848 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
USB1-214ENST00000568848 LOC110117498A0A087WWA1 95 aa7.09□□□□□ -1.27
USB1-214ENST00000568848 J3KT08 172 aa7.09□□□□□ -1.27
USB1-214ENST00000568848 C21orf62-AS1Q17RA5 79 aa7.09□□□□□ -1.27
USB1-214ENST00000568848 LYRM7Q5U5X0 104 aa7.08□□□□□ -1.28
USB1-214ENST00000568848 MUC12Q9UKN1 5478 aa7.07□□□□□ -1.28
USB1-214ENST00000568848 C9orf118A6NHY6 69 aa7.05□□□□□ -1.28
USB1-214ENST00000568848 TAX1BP3O14907 124 aa7.05□□□□□ -1.28
USB1-214ENST00000568848 NDUFB1O75438 58 aa7.05□□□□□ -1.28
USB1-214ENST00000568848 PDE6GP18545 87 aa7.05□□□□□ -1.28
USB1-214ENST00000568848 SPINK7P58062 85 aa7.04□□□□□ -1.28
USB1-214ENST00000568848 MTURNQ8N3F0 131 aa7.04□□□□□ -1.28
USB1-214ENST00000568848 A0A1B0GW54 56 aa7.03□□□□□ -1.28
USB1-214ENST00000568848 C8orf17Q9NRJ1 99 aa7.03□□□□□ -1.28
USB1-214ENST00000568848 IGKV3D-7A0A0C4DH55 119 aa7.02□□□□□ -1.29
USB1-214ENST00000568848 A8MWP4 228 aa7.02□□□□□ -1.29
USB1-214ENST00000568848 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
USB1-214ENST00000568848 A0A1W2PPM0 123 aa7.01□□□□□ -1.29
USB1-214ENST00000568848 NREPQ16612 68 aa7□□□□□ -1.29
USB1-214ENST00000568848 WFDC13Q8IUB5 93 aa7□□□□□ -1.29
USB1-214ENST00000568848 H3BT86 120 aa6.98□□□□□ -1.29
USB1-214ENST00000568848 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
USB1-214ENST00000568848 Q6ZVQ6 151 aa6.96□□□□□ -1.3
USB1-214ENST00000568848 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
USB1-214ENST00000568848 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
USB1-214ENST00000568848 SPCS1Q9Y6A9 102 aa6.92□□□□□ -1.3
USB1-214ENST00000568848 K7EQZ3 153 aa6.91□□□□□ -1.3
USB1-214ENST00000568848 SMCPP49901 116 aaPredicted RBP6.9□□□□□ -1.3
USB1-214ENST00000568848 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.3
USB1-214ENST00000568848 MRPL34Q9BQ48 92 aaKnown RBP6.9□□□□□ -1.3
USB1-214ENST00000568848 hDV103S1A0JD37 113 aa6.87□□□□□ -1.31
USB1-214ENST00000568848 BPY2O14599 106 aa6.86□□□□□ -1.31
USB1-214ENST00000568848 NDUFS5O43920 106 aa6.85□□□□□ -1.31
USB1-214ENST00000568848 Q8N9L7 120 aa6.85□□□□□ -1.31
USB1-214ENST00000568848 COL5A1-AS1Q5SY13 56 aa6.84□□□□□ -1.31
USB1-214ENST00000568848 PRO0461Q9UI25 63 aa6.83□□□□□ -1.32
USB1-214ENST00000568848 A6NN06 94 aa6.82□□□□□ -1.32
USB1-214ENST00000568848 MT1BP07438 61 aa6.81□□□□□ -1.32
USB1-214ENST00000568848 K7EP34 96 aa6.8□□□□□ -1.32
USB1-214ENST00000568848 Q5W150 140 aa6.8□□□□□ -1.32
USB1-214ENST00000568848 H1FX-AS1Q4G0G2 97 aa6.79□□□□□ -1.32
USB1-214ENST00000568848 KMT2DO14686 5537 aa6.78□□□□□ -1.32
USB1-214ENST00000568848 MDN1Q9NU22 5596 aa6.78□□□□□ -1.32
USB1-214ENST00000568848 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
USB1-214ENST00000568848 IGKV2D-30A0A075B6S6 120 aa6.76□□□□□ -1.33
USB1-214ENST00000568848 IGKV2-30P06310 120 aa6.76□□□□□ -1.33
USB1-214ENST00000568848 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
USB1-214ENST00000568848 PCP4L1A6NKN8 68 aa6.74□□□□□ -1.33
USB1-214ENST00000568848 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
USB1-214ENST00000568848 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
USB1-214ENST00000568848 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
USB1-214ENST00000568848 GTF2H5Q6ZYL4 71 aa6.69□□□□□ -1.34
USB1-214ENST00000568848 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
USB1-214ENST00000568848 ETDBQ3ZM63 59 aa6.67□□□□□ -1.34
USB1-214ENST00000568848 C5orf47Q569G3 176 aa6.67□□□□□ -1.34
USB1-214ENST00000568848 Q5VV11 94 aa6.67□□□□□ -1.34
USB1-214ENST00000568848 FAM236AA0A1B0GUQ0 79 aa6.66□□□□□ -1.34
USB1-214ENST00000568848 FAM236BA0A1B0GV22 79 aa6.66□□□□□ -1.34
USB1-214ENST00000568848 CXCL6P80162 114 aa6.66□□□□□ -1.34
USB1-214ENST00000568848 F8W1H4 67 aa6.65□□□□□ -1.34
USB1-214ENST00000568848 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
USB1-214ENST00000568848 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
USB1-214ENST00000568848 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
USB1-214ENST00000568848 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
USB1-214ENST00000568848 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
USB1-214ENST00000568848 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
USB1-214ENST00000568848 TP53AIP1Q9HCN2 124 aa6.53□□□□□ -1.36
USB1-214ENST00000568848 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
USB1-214ENST00000568848 SPRR2EP22531 72 aa6.49□□□□□ -1.37
USB1-214ENST00000568848 SPRR2BP35325 72 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms