RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 J3QR89 54 aa6.61□□□□□ -1.35
FANCA-231ENST00000568626 C9orf92A6NGG3 77 aa6.6□□□□□ -1.35
FANCA-231ENST00000568626 A8MWP4 228 aa6.6□□□□□ -1.35
FANCA-231ENST00000568626 BPY2O14599 106 aa6.6□□□□□ -1.35
FANCA-231ENST00000568626 A0A1B0GVX0 72 aa6.59□□□□□ -1.35
FANCA-231ENST00000568626 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
FANCA-231ENST00000568626 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
FANCA-231ENST00000568626 XP32Q5T750 250 aa6.57□□□□□ -1.36
FANCA-231ENST00000568626 IGKV3D-7A0A0C4DH55 119 aa6.55□□□□□ -1.36
FANCA-231ENST00000568626 DSCR10P59022 87 aa6.55□□□□□ -1.36
FANCA-231ENST00000568626 LINC00313P59037 77 aa6.55□□□□□ -1.36
FANCA-231ENST00000568626 PRR15Q8IV56 129 aa6.55□□□□□ -1.36
FANCA-231ENST00000568626 CXCL6P80162 114 aa6.54□□□□□ -1.36
FANCA-231ENST00000568626 ATP5EP2Q5VTU8 51 aa6.54□□□□□ -1.36
FANCA-231ENST00000568626 K7EQZ3 153 aa6.52□□□□□ -1.37
FANCA-231ENST00000568626 K7ERU9 68 aa6.51□□□□□ -1.37
FANCA-231ENST00000568626 SEC61BP60468 96 aaKnown RBP6.51□□□□□ -1.37
FANCA-231ENST00000568626 Q75L30 129 aa6.51□□□□□ -1.37
FANCA-231ENST00000568626 C8orf17Q9NRJ1 99 aa6.51□□□□□ -1.37
FANCA-231ENST00000568626 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
FANCA-231ENST00000568626 RPL37P61927 97 aaKnown RBP6.5□□□□□ -1.37
FANCA-231ENST00000568626 C20orf166-AS1Q96NR2 134 aa6.5□□□□□ -1.37
FANCA-231ENST00000568626 KRTAP16-1A8MUX0 517 aa6.49□□□□□ -1.37
FANCA-231ENST00000568626 NOTCH2NLQ7Z3S9 236 aa6.49□□□□□ -1.37
FANCA-231ENST00000568626 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
FANCA-231ENST00000568626 A8MUU9 505 aa6.48□□□□□ -1.37
FANCA-231ENST00000568626 MMP24-AS1A0A0U1RRL7 71 aa6.47□□□□□ -1.37
FANCA-231ENST00000568626 Q8N9L7 120 aa6.47□□□□□ -1.37
FANCA-231ENST00000568626 TMEM254Q8TBM7 123 aa6.46□□□□□ -1.38
FANCA-231ENST00000568626 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
FANCA-231ENST00000568626 HCG22E2RYF7 251 aa6.43□□□□□ -1.38
FANCA-231ENST00000568626 ATP11AUNQ6ZP68 121 aa6.43□□□□□ -1.38
FANCA-231ENST00000568626 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
FANCA-231ENST00000568626 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
FANCA-231ENST00000568626 CASC2Q6XLA1 102 aa6.42□□□□□ -1.38
FANCA-231ENST00000568626 PCOTHQ58A44 107 aa6.41□□□□□ -1.38
FANCA-231ENST00000568626 WFDC13Q8IUB5 93 aa6.4□□□□□ -1.38
FANCA-231ENST00000568626 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
FANCA-231ENST00000568626 MUC2Q02817 5179 aa6.4□□□□□ -1.39
FANCA-231ENST00000568626 HIST1H4AP62805 103 aaKnown RBP6.39□□□□□ -1.39
FANCA-231ENST00000568626 NDUFS5O43920 106 aa6.36□□□□□ -1.39
FANCA-231ENST00000568626 ZCCHC13Q8WW36 166 aaKnown RBP6.35□□□□□ -1.39
FANCA-231ENST00000568626 FAT4Q6V0I7 4981 aa6.34□□□□□ -1.39
FANCA-231ENST00000568626 KRTAP9-6A0A140TA67 174 aa6.32□□□□□ -1.4
FANCA-231ENST00000568626 IMUPQ9GZP8 106 aa6.32□□□□□ -1.4
FANCA-231ENST00000568626 TP53AIP1Q9HCN2 124 aa6.31□□□□□ -1.4
FANCA-231ENST00000568626 A0A087WVE0 104 aa6.3□□□□□ -1.4
FANCA-231ENST00000568626 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
FANCA-231ENST00000568626 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
FANCA-231ENST00000568626 A0A0U1RQV1 116 aa6.26□□□□□ -1.41
FANCA-231ENST00000568626 Q5W150 140 aa6.23□□□□□ -1.41
FANCA-231ENST00000568626 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
FANCA-231ENST00000568626 UQCRQO14949 82 aa6.21□□□□□ -1.42
FANCA-231ENST00000568626 SPINK7P58062 85 aa6.21□□□□□ -1.42
FANCA-231ENST00000568626 TRAV22A0A0B4J277 110 aa6.2□□□□□ -1.42
FANCA-231ENST00000568626 C7orf65Q6ZTY9 151 aa6.2□□□□□ -1.42
FANCA-231ENST00000568626 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
FANCA-231ENST00000568626 OCR1Q9BZK8 76 aa6.18□□□□□ -1.42
FANCA-231ENST00000568626 IGKV2D-30A0A075B6S6 120 aa6.17□□□□□ -1.42
FANCA-231ENST00000568626 FAM236AA0A1B0GUQ0 79 aa6.17□□□□□ -1.42
FANCA-231ENST00000568626 FAM236BA0A1B0GV22 79 aa6.17□□□□□ -1.42
FANCA-231ENST00000568626 ATOX1O00244 68 aa6.17□□□□□ -1.42
FANCA-231ENST00000568626 IGKV2-30P06310 120 aa6.17□□□□□ -1.42
FANCA-231ENST00000568626 HRES1P13985 223 aa6.16□□□□□ -1.42
FANCA-231ENST00000568626 SMIM20Q8N5G0 67 aa6.15□□□□□ -1.42
FANCA-231ENST00000568626 RBM12B-AS1Q9P1G2 102 aa6.15□□□□□ -1.42
FANCA-231ENST00000568626 LOC101927531A0A1B0GV80 90 aa6.14□□□□□ -1.43
FANCA-231ENST00000568626 H0Y9P7 68 aa6.14□□□□□ -1.43
FANCA-231ENST00000568626 MP68P56378 58 aa6.13□□□□□ -1.43
FANCA-231ENST00000568626 COX6B2Q6YFQ2 88 aa6.13□□□□□ -1.43
FANCA-231ENST00000568626 MPLKIPQ8TAP9 179 aa6.13□□□□□ -1.43
FANCA-231ENST00000568626 C5orf47Q569G3 176 aa6.12□□□□□ -1.43
FANCA-231ENST00000568626 KRTAP19-2Q3LHN2 52 aa6.11□□□□□ -1.43
FANCA-231ENST00000568626 TRAV7A0A075B6U4 112 aa6.09□□□□□ -1.43
FANCA-231ENST00000568626 FAM236DA0A1B0GTK5 79 aa6.09□□□□□ -1.43
FANCA-231ENST00000568626 H3BPC8 53 aa6.09□□□□□ -1.43
FANCA-231ENST00000568626 FAM236CP0DP71 79 aa6.09□□□□□ -1.43
FANCA-231ENST00000568626 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
FANCA-231ENST00000568626 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
FANCA-231ENST00000568626 LCE2CQ5TA81 110 aa6.07□□□□□ -1.44
FANCA-231ENST00000568626 C1orf64Q8NEQ6 169 aa6.07□□□□□ -1.44
FANCA-231ENST00000568626 LINC00208Q96KT6 92 aa6.06□□□□□ -1.44
FANCA-231ENST00000568626 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
FANCA-231ENST00000568626 C4orf26Q17RF5 130 aa6.01□□□□□ -1.45
FANCA-231ENST00000568626 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
FANCA-231ENST00000568626 MT1HP80294 61 aa5.99□□□□□ -1.45
FANCA-231ENST00000568626 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
FANCA-231ENST00000568626 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.46
FANCA-231ENST00000568626 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
FANCA-231ENST00000568626 KLKP1Q107X0 134 aa5.94□□□□□ -1.46
FANCA-231ENST00000568626 M0R2T5 61 aa5.93□□□□□ -1.46
FANCA-231ENST00000568626 A8MUN3 132 aa5.92□□□□□ -1.46
FANCA-231ENST00000568626 COX7CP15954 63 aa5.92□□□□□ -1.46
FANCA-231ENST00000568626 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
FANCA-231ENST00000568626 ANAPC13Q9BS18 74 aa5.9□□□□□ -1.46
FANCA-231ENST00000568626 KRTAP3-1Q9BYR8 98 aa5.9□□□□□ -1.46
FANCA-231ENST00000568626 SNURFQ9Y675 71 aa5.89□□□□□ -1.47
FANCA-231ENST00000568626 S4R3F8 94 aa5.85□□□□□ -1.47
FANCA-231ENST00000568626 DMAC1Q96GE9 116 aa5.84□□□□□ -1.47
FANCA-231ENST00000568626 NDUFC1O43677 76 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms