RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 LINC01554Q52M75 96 aa6.62□□□□□ -1.35
PALB2-206ENST00000568219 ZNF469Q96JG9 3925 aaPredicted RBP6.61□□□□□ -1.35
PALB2-206ENST00000568219 PSORS1C2Q9UIG4 136 aa6.61□□□□□ -1.35
PALB2-206ENST00000568219 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.61□□□□□ -1.35
PALB2-206ENST00000568219 IGLV5-52A0A0A0MRZ9 124 aa6.6□□□□□ -1.35
PALB2-206ENST00000568219 PANO1I0J062 215 aa6.6□□□□□ -1.35
PALB2-206ENST00000568219 NBDYA0A0U1RRE5 68 aa6.6□□□□□ -1.35
PALB2-206ENST00000568219 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
PALB2-206ENST00000568219 Q5W150 140 aa6.57□□□□□ -1.36
PALB2-206ENST00000568219 CSAG1Q6PB30 78 aa6.57□□□□□ -1.36
PALB2-206ENST00000568219 SPRR1BP22528 89 aa6.56□□□□□ -1.36
PALB2-206ENST00000568219 ZNF861PO60384 105 aa6.56□□□□□ -1.36
PALB2-206ENST00000568219 LY6G6CO95867 125 aa6.55□□□□□ -1.36
PALB2-206ENST00000568219 Q8N1X5 172 aa6.55□□□□□ -1.36
PALB2-206ENST00000568219 CSMD3Q7Z407 3707 aa6.55□□□□□ -1.36
PALB2-206ENST00000568219 K7ERS5 55 aa6.55□□□□□ -1.36
PALB2-206ENST00000568219 Q6ZR54 194 aa6.52□□□□□ -1.37
PALB2-206ENST00000568219 Q96NJ1 140 aa6.52□□□□□ -1.37
PALB2-206ENST00000568219 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
PALB2-206ENST00000568219 TGP01266 2768 aa6.48□□□□□ -1.37
PALB2-206ENST00000568219 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
PALB2-206ENST00000568219 WWC2-AS2Q96NR7 200 aa6.48□□□□□ -1.37
PALB2-206ENST00000568219 NUPR2A6NF83 97 aa6.48□□□□□ -1.37
PALB2-206ENST00000568219 A0A087WTM6 91 aa6.47□□□□□ -1.37
PALB2-206ENST00000568219 APLNQ9ULZ1 77 aa6.47□□□□□ -1.37
PALB2-206ENST00000568219 C1orf134Q5TEV5 83 aa6.45□□□□□ -1.38
PALB2-206ENST00000568219 IGLV7-43P04211 117 aa6.43□□□□□ -1.38
PALB2-206ENST00000568219 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
PALB2-206ENST00000568219 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
PALB2-206ENST00000568219 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
PALB2-206ENST00000568219 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
PALB2-206ENST00000568219 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
PALB2-206ENST00000568219 C9orf92A6NGG3 77 aa6.37□□□□□ -1.39
PALB2-206ENST00000568219 FBN3Q75N90 2809 aa6.33□□□□□ -1.4
PALB2-206ENST00000568219 KRTAP13-1Q8IUC0 172 aa6.33□□□□□ -1.4
PALB2-206ENST00000568219 LINC00483Q53H64 154 aa6.33□□□□□ -1.4
PALB2-206ENST00000568219 PLAC8Q9NZF1 115 aa6.33□□□□□ -1.4
PALB2-206ENST00000568219 A0A0D9SG42 100 aa6.32□□□□□ -1.4
PALB2-206ENST00000568219 A0A1B0GU33 70 aa6.31□□□□□ -1.4
PALB2-206ENST00000568219 ASB16-AS1Q495Z4 193 aa6.28□□□□□ -1.4
PALB2-206ENST00000568219 ANK3Q12955 4377 aaKnown RBP6.26□□□□□ -1.41
PALB2-206ENST00000568219 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
PALB2-206ENST00000568219 Q6ZRN7 208 aaPredicted RBP6.21□□□□□ -1.42
PALB2-206ENST00000568219 LINC00304Q8N9R0 145 aa6.19□□□□□ -1.42
PALB2-206ENST00000568219 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
PALB2-206ENST00000568219 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
PALB2-206ENST00000568219 MEGF8Q7Z7M0 2845 aa6.15□□□□□ -1.42
PALB2-206ENST00000568219 KRTAP13-2Q52LG2 175 aa6.14□□□□□ -1.43
PALB2-206ENST00000568219 ROMO1P60602 79 aa6.12□□□□□ -1.43
PALB2-206ENST00000568219 Q6ZSA8 131 aa6.12□□□□□ -1.43
PALB2-206ENST00000568219 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
PALB2-206ENST00000568219 H1FX-AS1Q4G0G2 97 aa6.11□□□□□ -1.43
PALB2-206ENST00000568219 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
PALB2-206ENST00000568219 A8MUU9 505 aa6.08□□□□□ -1.44
PALB2-206ENST00000568219 H0YAA0 97 aa6.07□□□□□ -1.44
PALB2-206ENST00000568219 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
PALB2-206ENST00000568219 DNAH10Q8IVF4 4471 aa5.99□□□□□ -1.45
PALB2-206ENST00000568219 NDUFAF8A1L188 74 aa5.99□□□□□ -1.45
PALB2-206ENST00000568219 KRTAP16-1A8MUX0 517 aa5.98□□□□□ -1.45
PALB2-206ENST00000568219 COX6B2Q6YFQ2 88 aa5.98□□□□□ -1.45
PALB2-206ENST00000568219 ANK2Q01484 3957 aa5.97□□□□□ -1.45
PALB2-206ENST00000568219 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
PALB2-206ENST00000568219 LYSTQ99698 3801 aa5.89□□□□□ -1.47
PALB2-206ENST00000568219 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
PALB2-206ENST00000568219 S4R3F8 94 aa5.84□□□□□ -1.47
PALB2-206ENST00000568219 HUWE1Q7Z6Z7 4374 aaKnown RBP5.8□□□□□ -1.48
PALB2-206ENST00000568219 DNAH9Q9NYC9 4486 aa5.8□□□□□ -1.48
PALB2-206ENST00000568219 P0C880 135 aa5.78□□□□□ -1.48
PALB2-206ENST00000568219 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
PALB2-206ENST00000568219 C20orf166-AS1Q96NR2 134 aa5.76□□□□□ -1.49
PALB2-206ENST00000568219 DNAH1Q9P2D7 4330 aa5.73□□□□□ -1.49
PALB2-206ENST00000568219 TPRXLQ17RH7 258 aa5.72□□□□□ -1.49
PALB2-206ENST00000568219 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
PALB2-206ENST00000568219 FRAS1Q86XX4 4008 aa5.69□□□□□ -1.5
PALB2-206ENST00000568219 PLECQ15149 4684 aaKnown RBP5.67□□□□□ -1.5
PALB2-206ENST00000568219 R4GN34 69 aa5.67□□□□□ -1.5
PALB2-206ENST00000568219 M0QZ58 72 aa5.67□□□□□ -1.5
PALB2-206ENST00000568219 DNAH7Q8WXX0 4024 aa5.66□□□□□ -1.5
PALB2-206ENST00000568219 KRTAP13-4Q3LI77 160 aa5.65□□□□□ -1.51
PALB2-206ENST00000568219 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
PALB2-206ENST00000568219 DNAH8Q96JB1 4490 aa5.62□□□□□ -1.51
PALB2-206ENST00000568219 CAMK2N1Q7Z7J9 78 aa5.61□□□□□ -1.51
PALB2-206ENST00000568219 CMYA5Q8N3K9 4069 aa5.61□□□□□ -1.51
PALB2-206ENST00000568219 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
PALB2-206ENST00000568219 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
PALB2-206ENST00000568219 KRTAP10-6P60371 365 aaPredicted RBP5.56□□□□□ -1.52
PALB2-206ENST00000568219 DNAH17Q9UFH2 4485 aa5.54□□□□□ -1.52
PALB2-206ENST00000568219 ALMS1Q8TCU4 4167 aa5.54□□□□□ -1.52
PALB2-206ENST00000568219 A0A0A0MQY5 61 aa5.53□□□□□ -1.52
PALB2-206ENST00000568219 KRTAP10-8P60410 259 aa5.51□□□□□ -1.53
PALB2-206ENST00000568219 Q5VSD8 79 aa5.5□□□□□ -1.53
PALB2-206ENST00000568219 KMT2AQ03164 3969 aa5.5□□□□□ -1.53
PALB2-206ENST00000568219 LRP1BQ9NZR2 4599 aa5.49□□□□□ -1.53
PALB2-206ENST00000568219 DNAH3Q8TD57 4116 aa5.49□□□□□ -1.53
PALB2-206ENST00000568219 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
PALB2-206ENST00000568219 STARD9Q9P2P6 4700 aa5.48□□□□□ -1.53
PALB2-206ENST00000568219 XP32Q5T750 250 aa5.48□□□□□ -1.53
PALB2-206ENST00000568219 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
PALB2-206ENST00000568219 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
PALB2-206ENST00000568219 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms