RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 STATHP02808 62 aa1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 HMGN2P05204 90 aaKnown RBP1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 TFF3Q07654 80 aa1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 RPS27LQ71UM5 84 aaKnown RBP1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 LINC00643Q86TS7 51 aa1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 U3KQA8 63 aa1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 DYNC1H1Q14204 4646 aaKnown RBP1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 HRNRQ86YZ3 2850 aaPredicted RBP1.28□□□□□ -2.2
HERPUD1-211ENST00000566550 PLECQ15149 4684 aaKnown RBP1.28□□□□□ -2.21
HERPUD1-211ENST00000566550 A0A087WXM4 84 aa1.27□□□□□ -2.21
HERPUD1-211ENST00000566550 SMIM31A0A1B0GVY4 71 aa1.27□□□□□ -2.21
HERPUD1-211ENST00000566550 ANGP03950 147 aaKnown RBP1.27□□□□□ -2.21
HERPUD1-211ENST00000566550 ACYP1P07311 99 aa1.27□□□□□ -2.21
HERPUD1-211ENST00000566550 DEFA5Q01523 94 aa1.27□□□□□ -2.21
HERPUD1-211ENST00000566550 DEFB133Q30KQ1 61 aa1.27□□□□□ -2.21
HERPUD1-211ENST00000566550 BVES-AS1Q5T3Y7 98 aa1.27□□□□□ -2.21
HERPUD1-211ENST00000566550 Q6JHZ5 121 aa1.27□□□□□ -2.21
HERPUD1-211ENST00000566550 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 DNAH10Q8IVF4 4471 aa1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 SPTY2D1-AS1A0A0U1RR47 76 aa1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 CPSF4LA6NMK7 179 aaKnown RBP1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 G3V318 75 aa1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 HMGN3Q15651 99 aa1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 DEFB110Q30KQ9 67 aa1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 COX14Q96I36 57 aa1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 LINC00472Q9H8W2 130 aa1.26□□□□□ -2.21
HERPUD1-211ENST00000566550 MYMXA0A1B0GTQ4 84 aa1.25□□□□□ -2.21
HERPUD1-211ENST00000566550 H0YGG7 62 aa1.25□□□□□ -2.21
HERPUD1-211ENST00000566550 FXYD6P3P58550 94 aa1.25□□□□□ -2.21
HERPUD1-211ENST00000566550 LELP1Q5T871 98 aa1.25□□□□□ -2.21
HERPUD1-211ENST00000566550 C10orf113Q5VZT2 155 aa1.25□□□□□ -2.21
HERPUD1-211ENST00000566550 TMEM263Q8WUH6 116 aaKnown RBP1.25□□□□□ -2.21
HERPUD1-211ENST00000566550 SPRR4Q96PI1 79 aa1.25□□□□□ -2.21
HERPUD1-211ENST00000566550 SMCO4Q9NRQ5 59 aa1.25□□□□□ -2.21
HERPUD1-211ENST00000566550 LRP2P98164 4655 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 K7EIL1 84 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 PDCD5O14737 125 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 IGLC2P0DOY2 106 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 IGLC3P0DOY3 106 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 C6orf201Q7Z4U5 140 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 S100ZQ8WXG8 99 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 DNAJC13O75165 2243 aa1.24□□□□□ -2.21
HERPUD1-211ENST00000566550 CEBPZOSA8MTT3 80 aa1.23□□□□□ -2.21
HERPUD1-211ENST00000566550 IFI6P09912 130 aa1.23□□□□□ -2.21
HERPUD1-211ENST00000566550 PLGLAQ15195 96 aa1.23□□□□□ -2.21
HERPUD1-211ENST00000566550 UBE2DNLQ8IWF7 75 aa1.23□□□□□ -2.21
HERPUD1-211ENST00000566550 LINC00846Q9NV44 126 aa1.23□□□□□ -2.21
HERPUD1-211ENST00000566550 ANKRD36A6QL64 1941 aa1.23□□□□□ -2.21
HERPUD1-211ENST00000566550 DNAH3Q8TD57 4116 aa1.22□□□□□ -2.21
HERPUD1-211ENST00000566550 SPINK7P58062 85 aa1.22□□□□□ -2.21
HERPUD1-211ENST00000566550 SNRPGP62308 76 aaKnown RBP1.22□□□□□ -2.21
HERPUD1-211ENST00000566550 SSBP3-AS1Q7Z2R9 100 aa1.22□□□□□ -2.21
HERPUD1-211ENST00000566550 LINC01600Q96MT4 127 aa1.22□□□□□ -2.21
HERPUD1-211ENST00000566550 TTTY10Q9BZA0 68 aa1.22□□□□□ -2.21
HERPUD1-211ENST00000566550 PROK2Q9HC23 129 aa1.22□□□□□ -2.21
HERPUD1-211ENST00000566550 CMC2Q9NRP2 79 aa1.22□□□□□ -2.21
HERPUD1-211ENST00000566550 FAT1Q14517 4588 aa1.21□□□□□ -2.22
HERPUD1-211ENST00000566550 PKHD1L1Q86WI1 4243 aa1.21□□□□□ -2.22
HERPUD1-211ENST00000566550 H0Y9P7 68 aa1.21□□□□□ -2.22
HERPUD1-211ENST00000566550 MRPL33O75394 65 aaKnown RBP1.21□□□□□ -2.22
HERPUD1-211ENST00000566550 SMIM13P0DJ93 91 aa1.21□□□□□ -2.22
HERPUD1-211ENST00000566550 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
HERPUD1-211ENST00000566550 TOMM5Q8N4H5 51 aa1.21□□□□□ -2.22
HERPUD1-211ENST00000566550 C18orf32Q8TCD1 76 aa1.21□□□□□ -2.22
HERPUD1-211ENST00000566550 DNAH6Q9C0G6 4158 aa1.2□□□□□ -2.22
HERPUD1-211ENST00000566550 APOBP04114 4563 aaKnown RBP1.2□□□□□ -2.22
HERPUD1-211ENST00000566550 TRBV6-1A0A0K0K1D8 114 aa1.2□□□□□ -2.22
HERPUD1-211ENST00000566550 H3BSH0 61 aa1.2□□□□□ -2.22
HERPUD1-211ENST00000566550 CFDP00746 253 aaPredicted RBP1.2□□□□□ -2.22
HERPUD1-211ENST00000566550 ABRACLQ9P1F3 81 aa1.2□□□□□ -2.22
HERPUD1-211ENST00000566550 SPINK9Q5DT21 86 aa1.19□□□□□ -2.22
HERPUD1-211ENST00000566550 SPATA8Q6RVD6 105 aa1.19□□□□□ -2.22
HERPUD1-211ENST00000566550 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
HERPUD1-211ENST00000566550 VPS13DQ5THJ4 4388 aa1.19□□□□□ -2.22
HERPUD1-211ENST00000566550 USH2AO75445 5202 aa1.18□□□□□ -2.22
HERPUD1-211ENST00000566550 FXYD6-FXYD2A0A087WZ82 144 aa1.18□□□□□ -2.22
HERPUD1-211ENST00000566550 A0A1B0GU69 56 aa1.18□□□□□ -2.22
HERPUD1-211ENST00000566550 RPS27P42677 84 aaKnown RBP1.18□□□□□ -2.22
HERPUD1-211ENST00000566550 Q5VSD8 79 aa1.18□□□□□ -2.22
HERPUD1-211ENST00000566550 FXYD6Q9H0Q3 95 aa1.18□□□□□ -2.22
HERPUD1-211ENST00000566550 DNAH2Q9P225 4427 aa1.18□□□□□ -2.22
HERPUD1-211ENST00000566550 LRP1BQ9NZR2 4599 aa1.18□□□□□ -2.22
HERPUD1-211ENST00000566550 PRH1P02810 166 aa1.17□□□□□ -2.22
HERPUD1-211ENST00000566550 UBE2D4Q9Y2X8 147 aa1.17□□□□□ -2.22
HERPUD1-211ENST00000566550 VPS13BQ7Z7G8 4022 aa1.17□□□□□ -2.22
HERPUD1-211ENST00000566550 DNAH5Q8TE73 4624 aa1.17□□□□□ -2.22
HERPUD1-211ENST00000566550 A0A1B0GUT8 65 aa1.16□□□□□ -2.22
HERPUD1-211ENST00000566550 SNRPGP15A8MWD9 76 aa1.16□□□□□ -2.22
HERPUD1-211ENST00000566550 DEFB112Q30KQ8 113 aa1.16□□□□□ -2.22
HERPUD1-211ENST00000566550 LINC01590Q5TEZ4 76 aa1.16□□□□□ -2.22
HERPUD1-211ENST00000566550 ARHGAP5-AS1Q96IT6 56 aa1.16□□□□□ -2.22
HERPUD1-211ENST00000566550 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
HERPUD1-211ENST00000566550 KMT2DO14686 5537 aa1.15□□□□□ -2.22
HERPUD1-211ENST00000566550 FAT3Q8TDW7 4589 aa1.15□□□□□ -2.23
HERPUD1-211ENST00000566550 KRTAP10-4P60372 401 aaPredicted RBP1.15□□□□□ -2.23
HERPUD1-211ENST00000566550 PIGYQ3MUY2 71 aa1.15□□□□□ -2.23
HERPUD1-211ENST00000566550 Q5BKY6 102 aa1.15□□□□□ -2.23
HERPUD1-211ENST00000566550 PLAC8Q9NZF1 115 aa1.15□□□□□ -2.23
HERPUD1-211ENST00000566550 PKD1P98161 4303 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms