RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 CDIP1Q9H305 208 aa4.46□□□□□ -1.7
CDH13-208ENST00000566333 DEFB116Q30KQ4 102 aa4.45□□□□□ -1.7
CDH13-208ENST00000566333 SIGMAR1Q99720 223 aa4.45□□□□□ -1.7
CDH13-208ENST00000566333 IGKV4-1P06312 121 aa4.43□□□□□ -1.7
CDH13-208ENST00000566333 NOTCH2NLQ7Z3S9 236 aa4.41□□□□□ -1.7
CDH13-208ENST00000566333 A0A1B0GVX0 72 aa4.4□□□□□ -1.71
CDH13-208ENST00000566333 KRTAP16-1A8MUX0 517 aa4.4□□□□□ -1.71
CDH13-208ENST00000566333 J3KT08 172 aa4.4□□□□□ -1.71
CDH13-208ENST00000566333 DSCR10P59022 87 aa4.4□□□□□ -1.71
CDH13-208ENST00000566333 Q6ZVQ6 151 aa4.4□□□□□ -1.71
CDH13-208ENST00000566333 LINC00846Q9NV44 126 aa4.4□□□□□ -1.71
CDH13-208ENST00000566333 RPL37P61927 97 aaKnown RBP4.39□□□□□ -1.71
CDH13-208ENST00000566333 NREPQ16612 68 aa4.39□□□□□ -1.71
CDH13-208ENST00000566333 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
CDH13-208ENST00000566333 IGKV3D-7A0A0C4DH55 119 aa4.38□□□□□ -1.71
CDH13-208ENST00000566333 A8MWP4 228 aa4.38□□□□□ -1.71
CDH13-208ENST00000566333 Q75L30 129 aa4.37□□□□□ -1.71
CDH13-208ENST00000566333 C20orf166-AS1Q96NR2 134 aa4.37□□□□□ -1.71
CDH13-208ENST00000566333 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
CDH13-208ENST00000566333 A8MUU9 505 aa4.36□□□□□ -1.71
CDH13-208ENST00000566333 K7EQZ3 153 aa4.36□□□□□ -1.71
CDH13-208ENST00000566333 LINC00313P59037 77 aa4.36□□□□□ -1.71
CDH13-208ENST00000566333 SEC61BP60468 96 aaKnown RBP4.36□□□□□ -1.71
CDH13-208ENST00000566333 FAM240AA0A1B0GVK7 77 aa4.35□□□□□ -1.71
CDH13-208ENST00000566333 C8orf87E5RJ46 101 aa4.35□□□□□ -1.71
CDH13-208ENST00000566333 PCOTHQ58A44 107 aa4.35□□□□□ -1.71
CDH13-208ENST00000566333 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
CDH13-208ENST00000566333 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.71
CDH13-208ENST00000566333 BPY2O14599 106 aa4.34□□□□□ -1.71
CDH13-208ENST00000566333 Q8N9L7 120 aa4.34□□□□□ -1.71
CDH13-208ENST00000566333 UBL5Q9BZL1 73 aa4.34□□□□□ -1.71
CDH13-208ENST00000566333 C8orf17Q9NRJ1 99 aa4.34□□□□□ -1.71
CDH13-208ENST00000566333 NDUFB1O75438 58 aa4.33□□□□□ -1.72
CDH13-208ENST00000566333 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
CDH13-208ENST00000566333 ACYP1P07311 99 aa4.31□□□□□ -1.72
CDH13-208ENST00000566333 CXCL6P80162 114 aa4.29□□□□□ -1.72
CDH13-208ENST00000566333 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
CDH13-208ENST00000566333 TMEM254Q8TBM7 123 aa4.28□□□□□ -1.72
CDH13-208ENST00000566333 hDV103S1A0JD37 113 aa4.27□□□□□ -1.73
CDH13-208ENST00000566333 ATP11AUNQ6ZP68 121 aa4.27□□□□□ -1.73
CDH13-208ENST00000566333 MRPL34Q9BQ48 92 aaKnown RBP4.27□□□□□ -1.73
CDH13-208ENST00000566333 LOC100996750A0A140TA64 210 aa4.26□□□□□ -1.73
CDH13-208ENST00000566333 KRTAP19-2Q3LHN2 52 aa4.26□□□□□ -1.73
CDH13-208ENST00000566333 ATP5EP2Q5VTU8 51 aa4.26□□□□□ -1.73
CDH13-208ENST00000566333 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
CDH13-208ENST00000566333 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
CDH13-208ENST00000566333 CASC2Q6XLA1 102 aa4.25□□□□□ -1.73
CDH13-208ENST00000566333 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
CDH13-208ENST00000566333 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
CDH13-208ENST00000566333 J3QR89 54 aa4.23□□□□□ -1.73
CDH13-208ENST00000566333 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
CDH13-208ENST00000566333 FLGP20930 4061 aaPredicted RBP4.22□□□□□ -1.73
CDH13-208ENST00000566333 A0A087WVE0 104 aa4.19□□□□□ -1.74
CDH13-208ENST00000566333 A0A0U1RQV1 116 aa4.19□□□□□ -1.74
CDH13-208ENST00000566333 K7ERU9 68 aa4.19□□□□□ -1.74
CDH13-208ENST00000566333 NDUFS5O43920 106 aa4.19□□□□□ -1.74
CDH13-208ENST00000566333 Q5W150 140 aa4.19□□□□□ -1.74
CDH13-208ENST00000566333 HRES1P13985 223 aa4.18□□□□□ -1.74
CDH13-208ENST00000566333 MPLKIPQ8TAP9 179 aa4.18□□□□□ -1.74
CDH13-208ENST00000566333 HIST1H4AP62805 103 aaKnown RBP4.17□□□□□ -1.74
CDH13-208ENST00000566333 SPINK7P58062 85 aa4.16□□□□□ -1.74
CDH13-208ENST00000566333 MT-ATP8P03928 68 aa4.13□□□□□ -1.75
CDH13-208ENST00000566333 MT1HP80294 61 aa4.13□□□□□ -1.75
CDH13-208ENST00000566333 TP53AIP1Q9HCN2 124 aa4.12□□□□□ -1.75
CDH13-208ENST00000566333 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
CDH13-208ENST00000566333 IGKV2-30P06310 120 aa4.11□□□□□ -1.75
CDH13-208ENST00000566333 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
CDH13-208ENST00000566333 COX6B2Q6YFQ2 88 aa4.11□□□□□ -1.75
CDH13-208ENST00000566333 C7orf65Q6ZTY9 151 aa4.11□□□□□ -1.75
CDH13-208ENST00000566333 TRAV22A0A0B4J277 110 aa4.09□□□□□ -1.75
CDH13-208ENST00000566333 OCR1Q9BZK8 76 aa4.09□□□□□ -1.75
CDH13-208ENST00000566333 IMUPQ9GZP8 106 aa4.08□□□□□ -1.76
CDH13-208ENST00000566333 RBM12B-AS1Q9P1G2 102 aa4.08□□□□□ -1.76
CDH13-208ENST00000566333 UQCRQO14949 82 aa4.07□□□□□ -1.76
CDH13-208ENST00000566333 FAM236DA0A1B0GTK5 79 aa4.05□□□□□ -1.76
CDH13-208ENST00000566333 FAM236AA0A1B0GUQ0 79 aa4.05□□□□□ -1.76
CDH13-208ENST00000566333 FAM236BA0A1B0GV22 79 aa4.05□□□□□ -1.76
CDH13-208ENST00000566333 H0Y9P7 68 aa4.05□□□□□ -1.76
CDH13-208ENST00000566333 FAM236CP0DP71 79 aa4.05□□□□□ -1.76
CDH13-208ENST00000566333 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
CDH13-208ENST00000566333 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
CDH13-208ENST00000566333 ATOX1O00244 68 aa4.02□□□□□ -1.77
CDH13-208ENST00000566333 C4orf26Q17RF5 130 aa4.02□□□□□ -1.77
CDH13-208ENST00000566333 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
CDH13-208ENST00000566333 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
CDH13-208ENST00000566333 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
CDH13-208ENST00000566333 SCGB1A1P11684 91 aa4□□□□□ -1.77
CDH13-208ENST00000566333 M0R2T5 61 aa3.99□□□□□ -1.77
CDH13-208ENST00000566333 C1orf64Q8NEQ6 169 aa3.99□□□□□ -1.77
CDH13-208ENST00000566333 LINC00208Q96KT6 92 aa3.99□□□□□ -1.77
CDH13-208ENST00000566333 MP68P56378 58 aa3.98□□□□□ -1.77
CDH13-208ENST00000566333 KLKP1Q107X0 134 aa3.98□□□□□ -1.77
CDH13-208ENST00000566333 H1FX-AS1Q4G0G2 97 aa3.98□□□□□ -1.77
CDH13-208ENST00000566333 C5orf47Q569G3 176 aa3.98□□□□□ -1.77
CDH13-208ENST00000566333 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
CDH13-208ENST00000566333 TRAV7A0A075B6U4 112 aa3.97□□□□□ -1.77
CDH13-208ENST00000566333 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
CDH13-208ENST00000566333 H3BPC8 53 aa3.96□□□□□ -1.78
CDH13-208ENST00000566333 SMIM20Q8N5G0 67 aa3.96□□□□□ -1.78
CDH13-208ENST00000566333 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms