RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
RNF40-208ENST00000565995 OBSCN-AS1Q96MR7 158 aa6.75□□□□□ -1.33
RNF40-208ENST00000565995 LOC110117498A0A087WWA1 95 aa6.73□□□□□ -1.33
RNF40-208ENST00000565995 PDE6GP18545 87 aa6.73□□□□□ -1.33
RNF40-208ENST00000565995 Q6ZQT0 140 aa6.72□□□□□ -1.33
RNF40-208ENST00000565995 SSPOA2VEC9 5147 aa6.72□□□□□ -1.33
RNF40-208ENST00000565995 C1orf195Q5TG92 126 aa6.71□□□□□ -1.34
RNF40-208ENST00000565995 A0A1W2PNM2 257 aa6.7□□□□□ -1.34
RNF40-208ENST00000565995 C21orf62-AS1Q17RA5 79 aa6.7□□□□□ -1.34
RNF40-208ENST00000565995 TRBV7-7A0A0K0K1E9 115 aa6.69□□□□□ -1.34
RNF40-208ENST00000565995 USH2AO75445 5202 aa6.69□□□□□ -1.34
RNF40-208ENST00000565995 A0A087WSZ3 146 aa6.68□□□□□ -1.34
RNF40-208ENST00000565995 Q6Q795 121 aa6.68□□□□□ -1.34
RNF40-208ENST00000565995 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
RNF40-208ENST00000565995 SS18L2Q9UHA2 77 aa6.67□□□□□ -1.34
RNF40-208ENST00000565995 FCGBPQ9Y6R7 5405 aaPredicted RBP6.62□□□□□ -1.35
RNF40-208ENST00000565995 A0A1B0GW54 56 aa6.62□□□□□ -1.35
RNF40-208ENST00000565995 J3QR89 54 aa6.62□□□□□ -1.35
RNF40-208ENST00000565995 NREPQ16612 68 aa6.59□□□□□ -1.35
RNF40-208ENST00000565995 ACYP1P07311 99 aa6.58□□□□□ -1.36
RNF40-208ENST00000565995 UBL5Q9BZL1 73 aa6.58□□□□□ -1.36
RNF40-208ENST00000565995 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
RNF40-208ENST00000565995 Q75L30 129 aa6.57□□□□□ -1.36
RNF40-208ENST00000565995 SIGMAR1Q99720 223 aa6.57□□□□□ -1.36
RNF40-208ENST00000565995 LINC00846Q9NV44 126 aa6.57□□□□□ -1.36
RNF40-208ENST00000565995 K7ERU9 68 aa6.56□□□□□ -1.36
RNF40-208ENST00000565995 Q6ZVQ6 151 aa6.56□□□□□ -1.36
RNF40-208ENST00000565995 DEFB116Q30KQ4 102 aa6.55□□□□□ -1.36
RNF40-208ENST00000565995 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
RNF40-208ENST00000565995 IGKV4-1P06312 121 aa6.54□□□□□ -1.36
RNF40-208ENST00000565995 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
RNF40-208ENST00000565995 BPY2O14599 106 aa6.52□□□□□ -1.37
RNF40-208ENST00000565995 Q96NJ1 140 aa6.52□□□□□ -1.37
RNF40-208ENST00000565995 LINC00472Q9H8W2 130 aa6.52□□□□□ -1.37
RNF40-208ENST00000565995 J3KT08 172 aa6.51□□□□□ -1.37
RNF40-208ENST00000565995 LCE2BO14633 110 aa6.51□□□□□ -1.37
RNF40-208ENST00000565995 MT2AP02795 61 aa6.49□□□□□ -1.37
RNF40-208ENST00000565995 NDUFB1O75438 58 aa6.47□□□□□ -1.37
RNF40-208ENST00000565995 KRTAP9-3Q9BYQ3 159 aa6.47□□□□□ -1.37
RNF40-208ENST00000565995 IGHV6-1A0A0B4J1U7 121 aa6.45□□□□□ -1.38
RNF40-208ENST00000565995 IGKV3D-7A0A0C4DH55 119 aa6.45□□□□□ -1.38
RNF40-208ENST00000565995 A8MWP4 228 aa6.45□□□□□ -1.38
RNF40-208ENST00000565995 ATP5EP2Q5VTU8 51 aa6.45□□□□□ -1.38
RNF40-208ENST00000565995 A0A1B0GVX0 72 aa6.44□□□□□ -1.38
RNF40-208ENST00000565995 LINC00643Q86TS7 51 aa6.44□□□□□ -1.38
RNF40-208ENST00000565995 C20orf166-AS1Q96NR2 134 aa6.44□□□□□ -1.38
RNF40-208ENST00000565995 K7EQZ3 153 aa6.43□□□□□ -1.38
RNF40-208ENST00000565995 MT1FP04733 61 aa6.43□□□□□ -1.38
RNF40-208ENST00000565995 DSCR10P59022 87 aa6.43□□□□□ -1.38
RNF40-208ENST00000565995 CXCL6P80162 114 aa6.43□□□□□ -1.38
RNF40-208ENST00000565995 Q8N9L7 120 aa6.43□□□□□ -1.38
RNF40-208ENST00000565995 A8MUU9 505 aa6.41□□□□□ -1.38
RNF40-208ENST00000565995 MACF1Q9UPN3 7388 aaKnown RBP6.4□□□□□ -1.38
RNF40-208ENST00000565995 HIST1H4AP62805 103 aaKnown RBP6.4□□□□□ -1.38
RNF40-208ENST00000565995 PRR15Q8IV56 129 aa6.4□□□□□ -1.38
RNF40-208ENST00000565995 C8orf87E5RJ46 101 aa6.39□□□□□ -1.39
RNF40-208ENST00000565995 LINC00313P59037 77 aa6.38□□□□□ -1.39
RNF40-208ENST00000565995 KRTAP19-6Q3LI70 58 aa6.37□□□□□ -1.39
RNF40-208ENST00000565995 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
RNF40-208ENST00000565995 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
RNF40-208ENST00000565995 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
RNF40-208ENST00000565995 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
RNF40-208ENST00000565995 WFDC13Q8IUB5 93 aa6.35□□□□□ -1.39
RNF40-208ENST00000565995 MPLKIPQ8TAP9 179 aa6.35□□□□□ -1.39
RNF40-208ENST00000565995 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
RNF40-208ENST00000565995 HCG22E2RYF7 251 aa6.34□□□□□ -1.39
RNF40-208ENST00000565995 MT-ATP8P03928 68 aa6.33□□□□□ -1.4
RNF40-208ENST00000565995 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
RNF40-208ENST00000565995 A0A087WVE0 104 aa6.32□□□□□ -1.4
RNF40-208ENST00000565995 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
RNF40-208ENST00000565995 KRTAP16-1A8MUX0 517 aa6.32□□□□□ -1.4
RNF40-208ENST00000565995 NDUFS5O43920 106 aa6.3□□□□□ -1.4
RNF40-208ENST00000565995 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
RNF40-208ENST00000565995 TMEM254Q8TBM7 123 aa6.3□□□□□ -1.4
RNF40-208ENST00000565995 MRPL34Q9BQ48 92 aaKnown RBP6.29□□□□□ -1.4
RNF40-208ENST00000565995 FAM236DA0A1B0GTK5 79 aa6.28□□□□□ -1.4
RNF40-208ENST00000565995 FAM236CP0DP71 79 aa6.28□□□□□ -1.4
RNF40-208ENST00000565995 HRES1P13985 223 aa6.28□□□□□ -1.4
RNF40-208ENST00000565995 IMUPQ9GZP8 106 aa6.27□□□□□ -1.41
RNF40-208ENST00000565995 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.41
RNF40-208ENST00000565995 SCGB1A1P11684 91 aa6.22□□□□□ -1.41
RNF40-208ENST00000565995 Q8N9P0 234 aaPredicted RBP6.22□□□□□ -1.41
RNF40-208ENST00000565995 FAM236AA0A1B0GUQ0 79 aa6.21□□□□□ -1.42
RNF40-208ENST00000565995 FAM236BA0A1B0GV22 79 aa6.21□□□□□ -1.42
RNF40-208ENST00000565995 ZCCHC13Q8WW36 166 aaKnown RBP6.17□□□□□ -1.42
RNF40-208ENST00000565995 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
RNF40-208ENST00000565995 ATOX1O00244 68 aa6.12□□□□□ -1.43
RNF40-208ENST00000565995 UQCRQO14949 82 aa6.12□□□□□ -1.43
RNF40-208ENST00000565995 TRAV22A0A0B4J277 110 aa6.1□□□□□ -1.43
RNF40-208ENST00000565995 Q5W150 140 aa6.1□□□□□ -1.43
RNF40-208ENST00000565995 SMIM20Q8N5G0 67 aa6.1□□□□□ -1.43
RNF40-208ENST00000565995 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
RNF40-208ENST00000565995 H0Y9P7 68 aa6.09□□□□□ -1.43
RNF40-208ENST00000565995 IGKV2D-30A0A075B6S6 120 aa6.07□□□□□ -1.44
RNF40-208ENST00000565995 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
RNF40-208ENST00000565995 MP68P56378 58 aa6.07□□□□□ -1.44
RNF40-208ENST00000565995 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
RNF40-208ENST00000565995 SPINK7P58062 85 aa6.04□□□□□ -1.44
RNF40-208ENST00000565995 C7orf65Q6ZTY9 151 aa6.04□□□□□ -1.44
RNF40-208ENST00000565995 C5orf47Q569G3 176 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms