RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TMEM254Q8TBM7 123 aa7.46□□□□□ -1.22
SF3B3-206ENST00000565990 A0A087X002 238 aa7.45□□□□□ -1.22
SF3B3-206ENST00000565990 KRTAP13-2Q52LG2 175 aa7.44□□□□□ -1.22
SF3B3-206ENST00000565990 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
SF3B3-206ENST00000565990 A0A0U1RQV1 116 aa7.43□□□□□ -1.22
SF3B3-206ENST00000565990 C5orf47Q569G3 176 aa7.43□□□□□ -1.22
SF3B3-206ENST00000565990 TNXBP22105 4242 aa7.43□□□□□ -1.22
SF3B3-206ENST00000565990 SMIM26A0A096LP01 95 aa7.4□□□□□ -1.22
SF3B3-206ENST00000565990 J3QL48 77 aa7.39□□□□□ -1.23
SF3B3-206ENST00000565990 DSCR10P59022 87 aa7.38□□□□□ -1.23
SF3B3-206ENST00000565990 SSBP3-AS1Q7Z2R9 100 aa7.38□□□□□ -1.23
SF3B3-206ENST00000565990 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
SF3B3-206ENST00000565990 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
SF3B3-206ENST00000565990 IGFL1Q6UW32 110 aa7.37□□□□□ -1.23
SF3B3-206ENST00000565990 Q8N9L7 120 aa7.36□□□□□ -1.23
SF3B3-206ENST00000565990 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-206ENST00000565990 HCG22E2RYF7 251 aa7.35□□□□□ -1.23
SF3B3-206ENST00000565990 IGLV9-49A0A0B4J1Y8 123 aa7.34□□□□□ -1.23
SF3B3-206ENST00000565990 H3BPC8 53 aa7.34□□□□□ -1.23
SF3B3-206ENST00000565990 Q5XG85 94 aa7.34□□□□□ -1.23
SF3B3-206ENST00000565990 NDUFB1O75438 58 aa7.33□□□□□ -1.24
SF3B3-206ENST00000565990 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
SF3B3-206ENST00000565990 HERC1Q15751 4861 aa7.33□□□□□ -1.24
SF3B3-206ENST00000565990 MOBPQ13875 183 aa7.32□□□□□ -1.24
SF3B3-206ENST00000565990 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
SF3B3-206ENST00000565990 SPAG11AQ6PDA7 123 aa7.31□□□□□ -1.24
SF3B3-206ENST00000565990 K7EQZ3 153 aa7.3□□□□□ -1.24
SF3B3-206ENST00000565990 LINC00304Q8N9R0 145 aa7.29□□□□□ -1.24
SF3B3-206ENST00000565990 LOC100996750A0A140TA64 210 aa7.28□□□□□ -1.24
SF3B3-206ENST00000565990 KRTAP4-6Q9BYQ5 205 aa7.28□□□□□ -1.24
SF3B3-206ENST00000565990 A0A087WSZ3 146 aa7.27□□□□□ -1.25
SF3B3-206ENST00000565990 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
SF3B3-206ENST00000565990 A8MWP4 228 aa7.26□□□□□ -1.25
SF3B3-206ENST00000565990 SPINK1P00995 79 aa7.26□□□□□ -1.25
SF3B3-206ENST00000565990 MP68P56378 58 aa7.26□□□□□ -1.25
SF3B3-206ENST00000565990 CD164Q04900 197 aa7.26□□□□□ -1.25
SF3B3-206ENST00000565990 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
SF3B3-206ENST00000565990 RPS29P62273 56 aaKnown RBP7.25□□□□□ -1.25
SF3B3-206ENST00000565990 C4orf48Q5BLP8 95 aa7.25□□□□□ -1.25
SF3B3-206ENST00000565990 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
SF3B3-206ENST00000565990 A0A0G2JQZ4 141 aa7.23□□□□□ -1.25
SF3B3-206ENST00000565990 hDV103S1A0JD37 113 aa7.23□□□□□ -1.25
SF3B3-206ENST00000565990 C4orf26Q17RF5 130 aa7.23□□□□□ -1.25
SF3B3-206ENST00000565990 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
SF3B3-206ENST00000565990 FP248Q71RG6 208 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-206ENST00000565990 HRCT1Q6UXD1 115 aa7.2□□□□□ -1.26
SF3B3-206ENST00000565990 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
SF3B3-206ENST00000565990 HMCN2Q8NDA2 5059 aa7.18□□□□□ -1.26
SF3B3-206ENST00000565990 TRAV22A0A0B4J277 110 aa7.18□□□□□ -1.26
SF3B3-206ENST00000565990 TP53AIP1Q9HCN2 124 aa7.18□□□□□ -1.26
SF3B3-206ENST00000565990 ASB16-AS1Q495Z4 193 aa7.16□□□□□ -1.26
SF3B3-206ENST00000565990 V9GYY9 64 aa7.16□□□□□ -1.26
SF3B3-206ENST00000565990 WFDC13Q8IUB5 93 aa7.15□□□□□ -1.26
SF3B3-206ENST00000565990 Q1T7F1 81 aa7.14□□□□□ -1.27
SF3B3-206ENST00000565990 LIMD2Q9BT23 127 aa7.14□□□□□ -1.27
SF3B3-206ENST00000565990 PRO0628Q9UI54 55 aa7.14□□□□□ -1.27
SF3B3-206ENST00000565990 MMP24-AS1A0A0U1RRL7 71 aa7.13□□□□□ -1.27
SF3B3-206ENST00000565990 H0Y9P7 68 aa7.13□□□□□ -1.27
SF3B3-206ENST00000565990 C1orf64Q8NEQ6 169 aa7.11□□□□□ -1.27
SF3B3-206ENST00000565990 LINC00208Q96KT6 92 aa7.1□□□□□ -1.27
SF3B3-206ENST00000565990 Q96NJ1 140 aa7.1□□□□□ -1.27
SF3B3-206ENST00000565990 RETNLBQ9BQ08 111 aa7.1□□□□□ -1.27
SF3B3-206ENST00000565990 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.27
SF3B3-206ENST00000565990 C1orf195Q5TG92 126 aa7.09□□□□□ -1.27
SF3B3-206ENST00000565990 A0A1B0GVX0 72 aa7.07□□□□□ -1.28
SF3B3-206ENST00000565990 PRR4Q16378 134 aa7.07□□□□□ -1.28
SF3B3-206ENST00000565990 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
SF3B3-206ENST00000565990 IGLV7-46A0A075B6I9 117 aa7.04□□□□□ -1.28
SF3B3-206ENST00000565990 LPAP08519 4548 aa7.02□□□□□ -1.29
SF3B3-206ENST00000565990 MRPL34Q9BQ48 92 aaKnown RBP7.02□□□□□ -1.29
SF3B3-206ENST00000565990 C8orf87E5RJ46 101 aa7.01□□□□□ -1.29
SF3B3-206ENST00000565990 MPLKIPQ8TAP9 179 aa7.01□□□□□ -1.29
SF3B3-206ENST00000565990 TPRXLQ17RH7 258 aa7□□□□□ -1.29
SF3B3-206ENST00000565990 LRP2P98164 4655 aa7□□□□□ -1.29
SF3B3-206ENST00000565990 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
SF3B3-206ENST00000565990 LOC101927531A0A1B0GV80 90 aa6.96□□□□□ -1.3
SF3B3-206ENST00000565990 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
SF3B3-206ENST00000565990 IGHV6-1A0A0B4J1U7 121 aa6.94□□□□□ -1.3
SF3B3-206ENST00000565990 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
SF3B3-206ENST00000565990 UBR4Q5T4S7 5183 aa6.94□□□□□ -1.3
SF3B3-206ENST00000565990 COA5Q86WW8 74 aa6.91□□□□□ -1.3
SF3B3-206ENST00000565990 Q8N9P0 234 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-206ENST00000565990 NDUFS5O43920 106 aa6.89□□□□□ -1.31
SF3B3-206ENST00000565990 XP32Q5T750 250 aa6.88□□□□□ -1.31
SF3B3-206ENST00000565990 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
SF3B3-206ENST00000565990 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
SF3B3-206ENST00000565990 Q75L30 129 aa6.85□□□□□ -1.31
SF3B3-206ENST00000565990 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
SF3B3-206ENST00000565990 Q5VV11 94 aa6.84□□□□□ -1.31
SF3B3-206ENST00000565990 A8MUN3 132 aa6.83□□□□□ -1.32
SF3B3-206ENST00000565990 LINC00313P59037 77 aa6.82□□□□□ -1.32
SF3B3-206ENST00000565990 PCOTHQ58A44 107 aa6.82□□□□□ -1.32
SF3B3-206ENST00000565990 NOTCH2NLQ7Z3S9 236 aa6.82□□□□□ -1.32
SF3B3-206ENST00000565990 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
SF3B3-206ENST00000565990 PSPHP1O15172 72 aa6.81□□□□□ -1.32
SF3B3-206ENST00000565990 KRTAP16-1A8MUX0 517 aa6.8□□□□□ -1.32
SF3B3-206ENST00000565990 MUC17Q685J3 4493 aa6.79□□□□□ -1.32
SF3B3-206ENST00000565990 ACYP2P14621 99 aa6.79□□□□□ -1.32
SF3B3-206ENST00000565990 C20orf166-AS1Q96NR2 134 aa6.78□□□□□ -1.32
SF3B3-206ENST00000565990 PRR15LQ9BU68 103 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms