RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 C9JAW5 83 aa12.5□□□□□ -0.41
TCF4-230ENST00000565908 C21orf62-AS1Q17RA5 79 aa12.49□□□□□ -0.41
TCF4-230ENST00000565908 KRTAP16-1A8MUX0 517 aa12.45□□□□□ -0.42
TCF4-230ENST00000565908 JMJD7-PLA2G4BH0Y9G9 81 aa12.45□□□□□ -0.42
TCF4-230ENST00000565908 IGHV6-1A0A0B4J1U7 121 aa12.43□□□□□ -0.42
TCF4-230ENST00000565908 M0R2T5 61 aa12.43□□□□□ -0.42
TCF4-230ENST00000565908 H3BT86 120 aa12.42□□□□□ -0.42
TCF4-230ENST00000565908 LCE2DQ5TA82 110 aaPredicted RBP12.42□□□□□ -0.42
TCF4-230ENST00000565908 NOTCH2NLQ7Z3S9 236 aa12.42□□□□□ -0.42
TCF4-230ENST00000565908 FLGP20930 4061 aaPredicted RBP12.42□□□□□ -0.42
TCF4-230ENST00000565908 Q6ZQT0 140 aa12.39□□□□□ -0.43
TCF4-230ENST00000565908 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
TCF4-230ENST00000565908 PRO0461Q9UI25 63 aa12.39□□□□□ -0.43
TCF4-230ENST00000565908 A0A1B0GVX0 72 aa12.38□□□□□ -0.43
TCF4-230ENST00000565908 C8orf87E5RJ46 101 aa12.38□□□□□ -0.43
TCF4-230ENST00000565908 J3KT08 172 aa12.38□□□□□ -0.43
TCF4-230ENST00000565908 LOC110117498A0A087WWA1 95 aa12.37□□□□□ -0.43
TCF4-230ENST00000565908 KRTAP10-6P60371 365 aaPredicted RBP12.37□□□□□ -0.43
TCF4-230ENST00000565908 A0A1B0GW54 56 aa12.36□□□□□ -0.43
TCF4-230ENST00000565908 PDE6GP18545 87 aa12.36□□□□□ -0.43
TCF4-230ENST00000565908 LORP23490 312 aaPredicted RBP12.36□□□□□ -0.43
TCF4-230ENST00000565908 F8W1H4 67 aa12.34□□□□□ -0.43
TCF4-230ENST00000565908 SMCPP49901 116 aaPredicted RBP12.33□□□□□ -0.44
TCF4-230ENST00000565908 C14orf132Q9NPU4 83 aa12.3□□□□□ -0.44
TCF4-230ENST00000565908 KRTAP9-6A0A140TA67 174 aa12.28□□□□□ -0.44
TCF4-230ENST00000565908 NDUFB1O75438 58 aa12.28□□□□□ -0.44
TCF4-230ENST00000565908 A8MWP4 228 aa12.22□□□□□ -0.45
TCF4-230ENST00000565908 NREPQ16612 68 aa12.17□□□□□ -0.46
TCF4-230ENST00000565908 ETDBQ3ZM63 59 aa12.17□□□□□ -0.46
TCF4-230ENST00000565908 C8orf17Q9NRJ1 99 aa12.16□□□□□ -0.46
TCF4-230ENST00000565908 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
TCF4-230ENST00000565908 Q8N9P0 234 aaPredicted RBP12.15□□□□□ -0.46
TCF4-230ENST00000565908 ZCCHC13Q8WW36 166 aaKnown RBP12.15□□□□□ -0.46
TCF4-230ENST00000565908 FAM236DA0A1B0GTK5 79 aa12.14□□□□□ -0.47
TCF4-230ENST00000565908 FAM236CP0DP71 79 aa12.14□□□□□ -0.47
TCF4-230ENST00000565908 HRES1P13985 223 aa12.14□□□□□ -0.47
TCF4-230ENST00000565908 RBM12B-AS1Q9P1G2 102 aa12.14□□□□□ -0.47
TCF4-230ENST00000565908 MPLKIPQ8TAP9 179 aa12.12□□□□□ -0.47
TCF4-230ENST00000565908 PRR15Q8IV56 129 aa12.1□□□□□ -0.47
TCF4-230ENST00000565908 Q6ZVQ6 151 aa12.06□□□□□ -0.48
TCF4-230ENST00000565908 CRCT1Q9UGL9 99 aa12.05□□□□□ -0.48
TCF4-230ENST00000565908 SPINK7P58062 85 aa12.03□□□□□ -0.48
TCF4-230ENST00000565908 FSIP2Q5CZC0 6907 aa12.02□□□□□ -0.48
TCF4-230ENST00000565908 MMP24-AS1A0A0U1RRL7 71 aa11.98□□□□□ -0.49
TCF4-230ENST00000565908 TMEM254Q8TBM7 123 aa11.98□□□□□ -0.49
TCF4-230ENST00000565908 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
TCF4-230ENST00000565908 K7EQZ3 153 aa11.96□□□□□ -0.49
TCF4-230ENST00000565908 BPY2O14599 106 aa11.95□□□□□ -0.5
TCF4-230ENST00000565908 KRTAP9-8Q9BYQ0 159 aa11.95□□□□□ -0.5
TCF4-230ENST00000565908 hDV103S1A0JD37 113 aa11.93□□□□□ -0.5
TCF4-230ENST00000565908 J3QR89 54 aa11.9□□□□□ -0.5
TCF4-230ENST00000565908 FAM240AA0A1B0GVK7 77 aa11.89□□□□□ -0.51
TCF4-230ENST00000565908 ACYP1P07311 99 aa11.87□□□□□ -0.51
TCF4-230ENST00000565908 NDUFS5O43920 106 aa11.86□□□□□ -0.51
TCF4-230ENST00000565908 WFDC13Q8IUB5 93 aa11.85□□□□□ -0.51
TCF4-230ENST00000565908 LINC00846Q9NV44 126 aa11.82□□□□□ -0.52
TCF4-230ENST00000565908 K7ERU9 68 aa11.81□□□□□ -0.52
TCF4-230ENST00000565908 Q8N9L7 120 aa11.79□□□□□ -0.52
TCF4-230ENST00000565908 UBL5Q9BZL1 73 aa11.79□□□□□ -0.52
TCF4-230ENST00000565908 MT2AP02795 61 aa11.78□□□□□ -0.52
TCF4-230ENST00000565908 CASC2Q6XLA1 102 aa11.76□□□□□ -0.53
TCF4-230ENST00000565908 MT1FP04733 61 aa11.69□□□□□ -0.54
TCF4-230ENST00000565908 HCG22E2RYF7 251 aa11.68□□□□□ -0.54
TCF4-230ENST00000565908 Q5W150 140 aa11.68□□□□□ -0.54
TCF4-230ENST00000565908 IGKV2D-30A0A075B6S6 120 aa11.67□□□□□ -0.54
TCF4-230ENST00000565908 IGKV2-30P06310 120 aa11.67□□□□□ -0.54
TCF4-230ENST00000565908 KRTAP10-10P60014 251 aa11.67□□□□□ -0.54
TCF4-230ENST00000565908 C7orf65Q6ZTY9 151 aa11.67□□□□□ -0.54
TCF4-230ENST00000565908 CXCL6P80162 114 aa11.63□□□□□ -0.55
TCF4-230ENST00000565908 ATP5EP2Q5VTU8 51 aa11.62□□□□□ -0.55
TCF4-230ENST00000565908 LINC00643Q86TS7 51 aa11.62□□□□□ -0.55
TCF4-230ENST00000565908 H1FX-AS1Q4G0G2 97 aa11.61□□□□□ -0.55
TCF4-230ENST00000565908 USH2AO75445 5202 aa11.58□□□□□ -0.56
TCF4-230ENST00000565908 KRTAP9-3Q9BYQ3 159 aa11.57□□□□□ -0.56
TCF4-230ENST00000565908 LCE2BO14633 110 aa11.49□□□□□ -0.57
TCF4-230ENST00000565908 SSPOA2VEC9 5147 aa11.46□□□□□ -0.58
TCF4-230ENST00000565908 C4orf26Q17RF5 130 aa11.45□□□□□ -0.58
TCF4-230ENST00000565908 TP53AIP1Q9HCN2 124 aa11.44□□□□□ -0.58
TCF4-230ENST00000565908 MT-ATP8P03928 68 aa11.4□□□□□ -0.58
TCF4-230ENST00000565908 HIST1H4AP62805 103 aaKnown RBP11.39□□□□□ -0.59
TCF4-230ENST00000565908 IMUPQ9GZP8 106 aa11.36□□□□□ -0.59
TCF4-230ENST00000565908 A0A087WVE0 104 aa11.3□□□□□ -0.6
TCF4-230ENST00000565908 KRTAP19-1Q8IUB9 90 aa11.28□□□□□ -0.6
TCF4-230ENST00000565908 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
TCF4-230ENST00000565908 KRTAP3-1Q9BYR8 98 aa11.26□□□□□ -0.61
TCF4-230ENST00000565908 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.21□□□□□ -0.61
TCF4-230ENST00000565908 S4R3F8 94 aa11.21□□□□□ -0.61
TCF4-230ENST00000565908 FCGBPQ9Y6R7 5405 aaPredicted RBP11.21□□□□□ -0.62
TCF4-230ENST00000565908 C5orf47Q569G3 176 aa11.2□□□□□ -0.62
TCF4-230ENST00000565908 TRAV22A0A0B4J277 110 aa11.17□□□□□ -0.62
TCF4-230ENST00000565908 CYP4F30PQ9H0H9 118 aa11.17□□□□□ -0.62
TCF4-230ENST00000565908 FAM236AA0A1B0GUQ0 79 aa11.13□□□□□ -0.63
TCF4-230ENST00000565908 FAM236BA0A1B0GV22 79 aa11.13□□□□□ -0.63
TCF4-230ENST00000565908 LOC101927531A0A1B0GV80 90 aa11.13□□□□□ -0.63
TCF4-230ENST00000565908 CSAG1Q6PB30 78 aa11.13□□□□□ -0.63
TCF4-230ENST00000565908 LCA10Q71F78 164 aa11.12□□□□□ -0.63
TCF4-230ENST00000565908 KRTAP19-6Q3LI70 58 aa11.11□□□□□ -0.63
TCF4-230ENST00000565908 UQCRQO14949 82 aa11.08□□□□□ -0.64
TCF4-230ENST00000565908 SCGB1A1P11684 91 aa11.08□□□□□ -0.64
TCF4-230ENST00000565908 KRTAP9-7A8MTY7 169 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms