RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TRIAP1O43715 76 aa3.31□□□□□ -1.88
TCF4-228ENST00000565393 DNAL4O96015 105 aa3.31□□□□□ -1.88
TCF4-228ENST00000565393 IGKV4-1P06312 121 aa3.31□□□□□ -1.88
TCF4-228ENST00000565393 COX6CP09669 75 aa3.31□□□□□ -1.88
TCF4-228ENST00000565393 FXYD2P54710 66 aa3.31□□□□□ -1.88
TCF4-228ENST00000565393 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
TCF4-228ENST00000565393 A0A1W2PNM2 257 aa3.3□□□□□ -1.88
TCF4-228ENST00000565393 C9JAW5 83 aa3.3□□□□□ -1.88
TCF4-228ENST00000565393 H3BQ85 93 aa3.3□□□□□ -1.88
TCF4-228ENST00000565393 TMEM256-PLSCR3K7ERE1 68 aa3.3□□□□□ -1.88
TCF4-228ENST00000565393 SEC61GP60059 68 aa3.3□□□□□ -1.88
TCF4-228ENST00000565393 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
TCF4-228ENST00000565393 ORMDL1Q9P0S3 153 aa3.3□□□□□ -1.88
TCF4-228ENST00000565393 TRBV7-4A0A0J9YYF1 115 aa3.29□□□□□ -1.88
TCF4-228ENST00000565393 SCGB1C2P0DMR2 95 aa3.29□□□□□ -1.88
TCF4-228ENST00000565393 FAM236DA0A1B0GTK5 79 aa3.28□□□□□ -1.88
TCF4-228ENST00000565393 K7ERJ3 54 aa3.28□□□□□ -1.88
TCF4-228ENST00000565393 TRACP01848 142 aa3.28□□□□□ -1.88
TCF4-228ENST00000565393 FAM236CP0DP71 79 aa3.28□□□□□ -1.88
TCF4-228ENST00000565393 IGHV6-1A0A0B4J1U7 121 aa3.27□□□□□ -1.89
TCF4-228ENST00000565393 CCKP06307 115 aa3.27□□□□□ -1.89
TCF4-228ENST00000565393 LYRM7Q5U5X0 104 aa3.27□□□□□ -1.89
TCF4-228ENST00000565393 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
TCF4-228ENST00000565393 RBM3P98179 157 aaKnown RBP3.26□□□□□ -1.89
TCF4-228ENST00000565393 NOTCH2NLQ7Z3S9 236 aa3.26□□□□□ -1.89
TCF4-228ENST00000565393 PRO0461Q9UI25 63 aa3.26□□□□□ -1.89
TCF4-228ENST00000565393 V9GYY9 64 aa3.26□□□□□ -1.89
TCF4-228ENST00000565393 KRTAP16-1A8MUX0 517 aa3.25□□□□□ -1.89
TCF4-228ENST00000565393 DSCR8Q96T75 97 aa3.25□□□□□ -1.89
TCF4-228ENST00000565393 LINC00472Q9H8W2 130 aa3.25□□□□□ -1.89
TCF4-228ENST00000565393 RBM12B-AS1Q9P1G2 102 aa3.25□□□□□ -1.89
TCF4-228ENST00000565393 BAALC-AS2P0C853 105 aa3.24□□□□□ -1.89
TCF4-228ENST00000565393 KRTAP9-8Q9BYQ0 159 aa3.23□□□□□ -1.89
TCF4-228ENST00000565393 PRO0628Q9UI54 55 aa3.23□□□□□ -1.89
TCF4-228ENST00000565393 A0A1B0GVX0 72 aa3.22□□□□□ -1.89
TCF4-228ENST00000565393 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
TCF4-228ENST00000565393 C8orf87E5RJ46 101 aa3.22□□□□□ -1.89
TCF4-228ENST00000565393 C4orf26Q17RF5 130 aa3.22□□□□□ -1.89
TCF4-228ENST00000565393 FAM236AA0A1B0GUQ0 79 aa3.21□□□□□ -1.9
TCF4-228ENST00000565393 FAM236BA0A1B0GV22 79 aa3.21□□□□□ -1.9
TCF4-228ENST00000565393 UQCRQO14949 82 aa3.21□□□□□ -1.9
TCF4-228ENST00000565393 NDUFB1O75438 58 aa3.21□□□□□ -1.9
TCF4-228ENST00000565393 SMCPP49901 116 aaPredicted RBP3.21□□□□□ -1.9
TCF4-228ENST00000565393 HRES1P13985 223 aa3.2□□□□□ -1.9
TCF4-228ENST00000565393 Q6ZQT0 140 aa3.2□□□□□ -1.9
TCF4-228ENST00000565393 SPINK7P58062 85 aa3.19□□□□□ -1.9
TCF4-228ENST00000565393 KRTAP10-10P60014 251 aa3.19□□□□□ -1.9
TCF4-228ENST00000565393 ATXN8Q156A1 80 aa3.19□□□□□ -1.9
TCF4-228ENST00000565393 JMJD7-PLA2G4BH0Y9G9 81 aa3.18□□□□□ -1.9
TCF4-228ENST00000565393 MT2AP02795 61 aa3.18□□□□□ -1.9
TCF4-228ENST00000565393 TMEM258P61165 79 aa3.18□□□□□ -1.9
TCF4-228ENST00000565393 MPLKIPQ8TAP9 179 aa3.18□□□□□ -1.9
TCF4-228ENST00000565393 ZCCHC13Q8WW36 166 aaKnown RBP3.18□□□□□ -1.9
TCF4-228ENST00000565393 COX7CP15954 63 aa3.17□□□□□ -1.9
TCF4-228ENST00000565393 PDE6GP18545 87 aa3.16□□□□□ -1.9
TCF4-228ENST00000565393 NREPQ16612 68 aa3.16□□□□□ -1.9
TCF4-228ENST00000565393 IMUPQ9GZP8 106 aa3.16□□□□□ -1.9
TCF4-228ENST00000565393 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
TCF4-228ENST00000565393 LOC110117498A0A087WWA1 95 aa3.15□□□□□ -1.91
TCF4-228ENST00000565393 A0A1B0GW54 56 aa3.15□□□□□ -1.91
TCF4-228ENST00000565393 A8MWP4 228 aa3.15□□□□□ -1.91
TCF4-228ENST00000565393 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.15□□□□□ -1.91
TCF4-228ENST00000565393 ATOX1O00244 68 aa3.15□□□□□ -1.91
TCF4-228ENST00000565393 MT1FP04733 61 aa3.15□□□□□ -1.91
TCF4-228ENST00000565393 C14orf132Q9NPU4 83 aa3.15□□□□□ -1.91
TCF4-228ENST00000565393 IGKV3D-7A0A0C4DH55 119 aa3.14□□□□□ -1.91
TCF4-228ENST00000565393 Q6ZVQ6 151 aa3.14□□□□□ -1.91
TCF4-228ENST00000565393 Q8N9P0 234 aaPredicted RBP3.14□□□□□ -1.91
TCF4-228ENST00000565393 FAM240AA0A1B0GVK7 77 aa3.13□□□□□ -1.91
TCF4-228ENST00000565393 ACYP1P07311 99 aa3.13□□□□□ -1.91
TCF4-228ENST00000565393 WFDC13Q8IUB5 93 aa3.13□□□□□ -1.91
TCF4-228ENST00000565393 KRTAP9-3Q9BYQ3 159 aa3.13□□□□□ -1.91
TCF4-228ENST00000565393 LCE2BO14633 110 aa3.12□□□□□ -1.91
TCF4-228ENST00000565393 NDUFS5O43920 106 aa3.12□□□□□ -1.91
TCF4-228ENST00000565393 LINC00643Q86TS7 51 aa3.12□□□□□ -1.91
TCF4-228ENST00000565393 PRR15Q8IV56 129 aa3.12□□□□□ -1.91
TCF4-228ENST00000565393 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
TCF4-228ENST00000565393 BRK1Q8WUW1 75 aa3.11□□□□□ -1.91
TCF4-228ENST00000565393 MRPL34Q9BQ48 92 aaKnown RBP3.11□□□□□ -1.91
TCF4-228ENST00000565393 SMIM26A0A096LP01 95 aa3.1□□□□□ -1.91
TCF4-228ENST00000565393 H3BT86 120 aa3.1□□□□□ -1.91
TCF4-228ENST00000565393 SERP2Q8N6R1 65 aa3.1□□□□□ -1.91
TCF4-228ENST00000565393 SERP1Q9Y6X1 66 aa3.1□□□□□ -1.91
TCF4-228ENST00000565393 hDV103S1A0JD37 113 aa3.09□□□□□ -1.91
TCF4-228ENST00000565393 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
TCF4-228ENST00000565393 LINC00846Q9NV44 126 aa3.09□□□□□ -1.91
TCF4-228ENST00000565393 MMP24-AS1A0A0U1RRL7 71 aa3.08□□□□□ -1.92
TCF4-228ENST00000565393 K7EQZ3 153 aa3.08□□□□□ -1.92
TCF4-228ENST00000565393 BPY2O14599 106 aa3.08□□□□□ -1.92
TCF4-228ENST00000565393 PMAIP1Q13794 54 aa3.08□□□□□ -1.92
TCF4-228ENST00000565393 H1FX-AS1Q4G0G2 97 aa3.08□□□□□ -1.92
TCF4-228ENST00000565393 IGKV2D-30A0A075B6S6 120 aa3.07□□□□□ -1.92
TCF4-228ENST00000565393 IGKV2-30P06310 120 aa3.07□□□□□ -1.92
TCF4-228ENST00000565393 FLGP20930 4061 aaPredicted RBP3.07□□□□□ -1.92
TCF4-228ENST00000565393 HIST1H4AP62805 103 aaKnown RBP3.05□□□□□ -1.92
TCF4-228ENST00000565393 Q5W150 140 aa3.05□□□□□ -1.92
TCF4-228ENST00000565393 CYSTM1Q9H1C7 97 aa3.05□□□□□ -1.92
TCF4-228ENST00000565393 HCG22E2RYF7 251 aa3.04□□□□□ -1.92
TCF4-228ENST00000565393 CASC2Q6XLA1 102 aa3.04□□□□□ -1.92
TCF4-228ENST00000565393 Q8N9L7 120 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms