RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 C9JAW5 83 aa6.46□□□□□ -1.38
SPG7-211ENST00000565370 NAA38Q9BRA0 125 aaKnown RBP6.46□□□□□ -1.38
SPG7-211ENST00000565370 JMJD7-PLA2G4BH0Y9G9 81 aa6.45□□□□□ -1.38
SPG7-211ENST00000565370 LINC00313P59037 77 aa6.45□□□□□ -1.38
SPG7-211ENST00000565370 MT1HP80294 61 aa6.44□□□□□ -1.38
SPG7-211ENST00000565370 GTF2H5Q6ZYL4 71 aa6.44□□□□□ -1.38
SPG7-211ENST00000565370 LINC00472Q9H8W2 130 aa6.43□□□□□ -1.38
SPG7-211ENST00000565370 TRBV20-1A0A075B6N2 111 aa6.42□□□□□ -1.38
SPG7-211ENST00000565370 IGHV6-1A0A0B4J1U7 121 aa6.42□□□□□ -1.38
SPG7-211ENST00000565370 J3KT08 172 aa6.42□□□□□ -1.38
SPG7-211ENST00000565370 K7EP34 96 aa6.42□□□□□ -1.38
SPG7-211ENST00000565370 DEFB116Q30KQ4 102 aa6.42□□□□□ -1.38
SPG7-211ENST00000565370 SPCS1Q9Y6A9 102 aa6.42□□□□□ -1.38
SPG7-211ENST00000565370 C8orf87E5RJ46 101 aa6.41□□□□□ -1.38
SPG7-211ENST00000565370 M0R2T5 61 aa6.41□□□□□ -1.38
SPG7-211ENST00000565370 PDE6GP18545 87 aa6.41□□□□□ -1.38
SPG7-211ENST00000565370 LOC110117498A0A087WWA1 95 aa6.39□□□□□ -1.39
SPG7-211ENST00000565370 A0A1B0GVX0 72 aa6.39□□□□□ -1.39
SPG7-211ENST00000565370 A0A1B0GW54 56 aa6.39□□□□□ -1.39
SPG7-211ENST00000565370 KRTAP16-1A8MUX0 517 aa6.38□□□□□ -1.39
SPG7-211ENST00000565370 Q6ZQT0 140 aa6.38□□□□□ -1.39
SPG7-211ENST00000565370 NDUFB1O75438 58 aa6.37□□□□□ -1.39
SPG7-211ENST00000565370 C14orf132Q9NPU4 83 aa6.35□□□□□ -1.39
SPG7-211ENST00000565370 H3BT86 120 aa6.34□□□□□ -1.39
SPG7-211ENST00000565370 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
SPG7-211ENST00000565370 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
SPG7-211ENST00000565370 F8W1H4 67 aa6.31□□□□□ -1.4
SPG7-211ENST00000565370 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
SPG7-211ENST00000565370 FAM236DA0A1B0GTK5 79 aa6.3□□□□□ -1.4
SPG7-211ENST00000565370 A8MWP4 228 aa6.3□□□□□ -1.4
SPG7-211ENST00000565370 FAM236CP0DP71 79 aa6.3□□□□□ -1.4
SPG7-211ENST00000565370 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
SPG7-211ENST00000565370 NREPQ16612 68 aa6.29□□□□□ -1.4
SPG7-211ENST00000565370 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
SPG7-211ENST00000565370 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
SPG7-211ENST00000565370 ZCCHC13Q8WW36 166 aaKnown RBP6.27□□□□□ -1.41
SPG7-211ENST00000565370 C8orf17Q9NRJ1 99 aa6.27□□□□□ -1.41
SPG7-211ENST00000565370 PRO0461Q9UI25 63 aa6.27□□□□□ -1.41
SPG7-211ENST00000565370 IGKV3D-7A0A0C4DH55 119 aa6.25□□□□□ -1.41
SPG7-211ENST00000565370 LCE2BO14633 110 aa6.24□□□□□ -1.41
SPG7-211ENST00000565370 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
SPG7-211ENST00000565370 SMCPP49901 116 aaPredicted RBP6.23□□□□□ -1.41
SPG7-211ENST00000565370 Q6ZVQ6 151 aa6.23□□□□□ -1.41
SPG7-211ENST00000565370 PRR15Q8IV56 129 aa6.23□□□□□ -1.41
SPG7-211ENST00000565370 Q8N9P0 234 aaPredicted RBP6.23□□□□□ -1.41
SPG7-211ENST00000565370 HRES1P13985 223 aa6.21□□□□□ -1.42
SPG7-211ENST00000565370 K7ERU9 68 aa6.2□□□□□ -1.42
SPG7-211ENST00000565370 ETDBQ3ZM63 59 aa6.2□□□□□ -1.42
SPG7-211ENST00000565370 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
SPG7-211ENST00000565370 BPY2O14599 106 aa6.19□□□□□ -1.42
SPG7-211ENST00000565370 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
SPG7-211ENST00000565370 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
SPG7-211ENST00000565370 MMP24-AS1A0A0U1RRL7 71 aa6.18□□□□□ -1.42
SPG7-211ENST00000565370 J3QR89 54 aa6.18□□□□□ -1.42
SPG7-211ENST00000565370 K7EQZ3 153 aa6.18□□□□□ -1.42
SPG7-211ENST00000565370 MRPL34Q9BQ48 92 aaKnown RBP6.18□□□□□ -1.42
SPG7-211ENST00000565370 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
SPG7-211ENST00000565370 SPINK7P58062 85 aa6.17□□□□□ -1.42
SPG7-211ENST00000565370 NDUFS5O43920 106 aa6.16□□□□□ -1.42
SPG7-211ENST00000565370 WFDC13Q8IUB5 93 aa6.13□□□□□ -1.43
SPG7-211ENST00000565370 UBL5Q9BZL1 73 aa6.12□□□□□ -1.43
SPG7-211ENST00000565370 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
SPG7-211ENST00000565370 CASC2Q6XLA1 102 aa6.09□□□□□ -1.43
SPG7-211ENST00000565370 Q8N9L7 120 aa6.08□□□□□ -1.44
SPG7-211ENST00000565370 C7orf65Q6ZTY9 151 aa6.06□□□□□ -1.44
SPG7-211ENST00000565370 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
SPG7-211ENST00000565370 LINC00846Q9NV44 126 aa6.06□□□□□ -1.44
SPG7-211ENST00000565370 USH2AO75445 5202 aa6.05□□□□□ -1.44
SPG7-211ENST00000565370 HCG22E2RYF7 251 aa6.05□□□□□ -1.44
SPG7-211ENST00000565370 IGKV2D-30A0A075B6S6 120 aa6.04□□□□□ -1.44
SPG7-211ENST00000565370 FAM240AA0A1B0GVK7 77 aa6.04□□□□□ -1.44
SPG7-211ENST00000565370 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
SPG7-211ENST00000565370 ACYP1P07311 99 aa6.02□□□□□ -1.45
SPG7-211ENST00000565370 CXCL6P80162 114 aa6.02□□□□□ -1.45
SPG7-211ENST00000565370 MT2AP02795 61 aa6.01□□□□□ -1.45
SPG7-211ENST00000565370 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
SPG7-211ENST00000565370 H1FX-AS1Q4G0G2 97 aa5.97□□□□□ -1.45
SPG7-211ENST00000565370 C5orf47Q569G3 176 aa5.97□□□□□ -1.45
SPG7-211ENST00000565370 Q5W150 140 aa5.97□□□□□ -1.45
SPG7-211ENST00000565370 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.45
SPG7-211ENST00000565370 MT1FP04733 61 aa5.96□□□□□ -1.46
SPG7-211ENST00000565370 TP53AIP1Q9HCN2 124 aa5.93□□□□□ -1.46
SPG7-211ENST00000565370 MT-ATP8P03928 68 aa5.91□□□□□ -1.46
SPG7-211ENST00000565370 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
SPG7-211ENST00000565370 SEC61GP60059 68 aa5.9□□□□□ -1.46
SPG7-211ENST00000565370 C4orf26Q17RF5 130 aa5.89□□□□□ -1.47
SPG7-211ENST00000565370 SCGB1A1P11684 91 aa5.88□□□□□ -1.47
SPG7-211ENST00000565370 ATP5EP2Q5VTU8 51 aa5.88□□□□□ -1.47
SPG7-211ENST00000565370 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
SPG7-211ENST00000565370 SYNE2Q8WXH0 6885 aaKnown RBP5.86□□□□□ -1.47
SPG7-211ENST00000565370 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
SPG7-211ENST00000565370 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
SPG7-211ENST00000565370 IMUPQ9GZP8 106 aa5.84□□□□□ -1.47
SPG7-211ENST00000565370 TRAV22A0A0B4J277 110 aa5.81□□□□□ -1.48
SPG7-211ENST00000565370 S4R3F8 94 aa5.81□□□□□ -1.48
SPG7-211ENST00000565370 HIST1H4AP62805 103 aaKnown RBP5.8□□□□□ -1.48
SPG7-211ENST00000565370 C1orf64Q8NEQ6 169 aa5.8□□□□□ -1.48
SPG7-211ENST00000565370 LOC101927531A0A1B0GV80 90 aa5.78□□□□□ -1.48
SPG7-211ENST00000565370 FAM236AA0A1B0GUQ0 79 aa5.75□□□□□ -1.49
SPG7-211ENST00000565370 FAM236BA0A1B0GV22 79 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms