RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 DSCR8Q96T75 97 aa4.36□□□□□ -1.71
CAPN3-213ENST00000565173 VPS25Q9BRG1 176 aa4.36□□□□□ -1.71
CAPN3-213ENST00000565173 TRBV7-4A0A0J9YYF1 115 aa4.35□□□□□ -1.71
CAPN3-213ENST00000565173 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
CAPN3-213ENST00000565173 JMJD7-PLA2G4BH0Y9G9 81 aa4.35□□□□□ -1.71
CAPN3-213ENST00000565173 H3BT86 120 aa4.35□□□□□ -1.71
CAPN3-213ENST00000565173 CCKP06307 115 aa4.35□□□□□ -1.71
CAPN3-213ENST00000565173 SS18L2Q9UHA2 77 aa4.35□□□□□ -1.71
CAPN3-213ENST00000565173 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
CAPN3-213ENST00000565173 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
CAPN3-213ENST00000565173 KRTAP9-7A8MTY7 169 aa4.33□□□□□ -1.72
CAPN3-213ENST00000565173 K7EP34 96 aa4.33□□□□□ -1.72
CAPN3-213ENST00000565173 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
CAPN3-213ENST00000565173 LOC110117498A0A087WWA1 95 aa4.31□□□□□ -1.72
CAPN3-213ENST00000565173 MT2AP02795 61 aa4.31□□□□□ -1.72
CAPN3-213ENST00000565173 PDE6GP18545 87 aa4.31□□□□□ -1.72
CAPN3-213ENST00000565173 DSCR10P59022 87 aa4.31□□□□□ -1.72
CAPN3-213ENST00000565173 Q6ZQT0 140 aa4.31□□□□□ -1.72
CAPN3-213ENST00000565173 GTF2H5Q6ZYL4 71 aa4.31□□□□□ -1.72
CAPN3-213ENST00000565173 SMCPP49901 116 aaPredicted RBP4.3□□□□□ -1.72
CAPN3-213ENST00000565173 MPLKIPQ8TAP9 179 aa4.3□□□□□ -1.72
CAPN3-213ENST00000565173 LCE2BO14633 110 aa4.29□□□□□ -1.72
CAPN3-213ENST00000565173 PRO0461Q9UI25 63 aa4.29□□□□□ -1.72
CAPN3-213ENST00000565173 MT1FP04733 61 aa4.28□□□□□ -1.72
CAPN3-213ENST00000565173 C21orf62-AS1Q17RA5 79 aa4.28□□□□□ -1.72
CAPN3-213ENST00000565173 NOTCH2NLQ7Z3S9 236 aa4.28□□□□□ -1.72
CAPN3-213ENST00000565173 SIGMAR1Q99720 223 aa4.28□□□□□ -1.72
CAPN3-213ENST00000565173 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
CAPN3-213ENST00000565173 IGKV4-1P06312 121 aa4.27□□□□□ -1.73
CAPN3-213ENST00000565173 HRES1P13985 223 aa4.27□□□□□ -1.73
CAPN3-213ENST00000565173 LINC00313P59037 77 aa4.27□□□□□ -1.73
CAPN3-213ENST00000565173 DEFB116Q30KQ4 102 aa4.27□□□□□ -1.73
CAPN3-213ENST00000565173 A0A1B0GW54 56 aa4.26□□□□□ -1.73
CAPN3-213ENST00000565173 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
CAPN3-213ENST00000565173 F8W1H4 67 aa4.25□□□□□ -1.73
CAPN3-213ENST00000565173 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
CAPN3-213ENST00000565173 FAM236DA0A1B0GTK5 79 aa4.24□□□□□ -1.73
CAPN3-213ENST00000565173 FAM236CP0DP71 79 aa4.24□□□□□ -1.73
CAPN3-213ENST00000565173 KRTAP10-10P60014 251 aa4.23□□□□□ -1.73
CAPN3-213ENST00000565173 NREPQ16612 68 aa4.23□□□□□ -1.73
CAPN3-213ENST00000565173 ETDBQ3ZM63 59 aa4.23□□□□□ -1.73
CAPN3-213ENST00000565173 A0A1B0GV90 55 aa4.22□□□□□ -1.73
CAPN3-213ENST00000565173 J3KT08 172 aa4.22□□□□□ -1.73
CAPN3-213ENST00000565173 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
CAPN3-213ENST00000565173 IGHV6-1A0A0B4J1U7 121 aa4.21□□□□□ -1.74
CAPN3-213ENST00000565173 A0A1B0GVX0 72 aa4.2□□□□□ -1.74
CAPN3-213ENST00000565173 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
CAPN3-213ENST00000565173 NDUFB1O75438 58 aa4.19□□□□□ -1.74
CAPN3-213ENST00000565173 A8MWP4 228 aa4.18□□□□□ -1.74
CAPN3-213ENST00000565173 C8orf87E5RJ46 101 aa4.18□□□□□ -1.74
CAPN3-213ENST00000565173 Q6ZVQ6 151 aa4.18□□□□□ -1.74
CAPN3-213ENST00000565173 BPY2O14599 106 aa4.17□□□□□ -1.74
CAPN3-213ENST00000565173 UBL5Q9BZL1 73 aa4.17□□□□□ -1.74
CAPN3-213ENST00000565173 LINC00846Q9NV44 126 aa4.17□□□□□ -1.74
CAPN3-213ENST00000565173 IGKV3D-7A0A0C4DH55 119 aa4.16□□□□□ -1.74
CAPN3-213ENST00000565173 SPINK7P58062 85 aa4.16□□□□□ -1.74
CAPN3-213ENST00000565173 ZCCHC13Q8WW36 166 aaKnown RBP4.16□□□□□ -1.74
CAPN3-213ENST00000565173 PRR15Q8IV56 129 aa4.15□□□□□ -1.75
CAPN3-213ENST00000565173 C8orf17Q9NRJ1 99 aa4.15□□□□□ -1.75
CAPN3-213ENST00000565173 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
CAPN3-213ENST00000565173 K7EQZ3 153 aa4.14□□□□□ -1.75
CAPN3-213ENST00000565173 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
CAPN3-213ENST00000565173 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-213ENST00000565173 Q8N9L7 120 aa4.12□□□□□ -1.75
CAPN3-213ENST00000565173 MMP24-AS1A0A0U1RRL7 71 aa4.11□□□□□ -1.75
CAPN3-213ENST00000565173 ACYP1P07311 99 aa4.11□□□□□ -1.75
CAPN3-213ENST00000565173 FAM240AA0A1B0GVK7 77 aa4.09□□□□□ -1.75
CAPN3-213ENST00000565173 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
CAPN3-213ENST00000565173 TMEM254Q8TBM7 123 aa4.09□□□□□ -1.75
CAPN3-213ENST00000565173 MRPL34Q9BQ48 92 aaKnown RBP4.09□□□□□ -1.75
CAPN3-213ENST00000565173 WFDC13Q8IUB5 93 aa4.08□□□□□ -1.76
CAPN3-213ENST00000565173 NDUFS5O43920 106 aa4.07□□□□□ -1.76
CAPN3-213ENST00000565173 CXCL6P80162 114 aa4.07□□□□□ -1.76
CAPN3-213ENST00000565173 CASC2Q6XLA1 102 aa4.07□□□□□ -1.76
CAPN3-213ENST00000565173 HCG22E2RYF7 251 aa4.05□□□□□ -1.76
CAPN3-213ENST00000565173 J3QR89 54 aa4.05□□□□□ -1.76
CAPN3-213ENST00000565173 ATP5EP2Q5VTU8 51 aa4.03□□□□□ -1.76
CAPN3-213ENST00000565173 HIST1H4AP62805 103 aaKnown RBP4.02□□□□□ -1.77
CAPN3-213ENST00000565173 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
CAPN3-213ENST00000565173 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
CAPN3-213ENST00000565173 LINC00643Q86TS7 51 aa4.02□□□□□ -1.77
CAPN3-213ENST00000565173 Q5W150 140 aa3.98□□□□□ -1.77
CAPN3-213ENST00000565173 K7ERU9 68 aa3.97□□□□□ -1.77
CAPN3-213ENST00000565173 IGKV2D-30A0A075B6S6 120 aa3.96□□□□□ -1.78
CAPN3-213ENST00000565173 A0A087WVE0 104 aa3.96□□□□□ -1.78
CAPN3-213ENST00000565173 IGKV2-30P06310 120 aa3.96□□□□□ -1.78
CAPN3-213ENST00000565173 TP53AIP1Q9HCN2 124 aa3.96□□□□□ -1.78
CAPN3-213ENST00000565173 C7orf65Q6ZTY9 151 aa3.94□□□□□ -1.78
CAPN3-213ENST00000565173 MUC12Q9UKN1 5478 aa3.94□□□□□ -1.78
CAPN3-213ENST00000565173 C4orf26Q17RF5 130 aa3.91□□□□□ -1.78
CAPN3-213ENST00000565173 NEBP20929 6669 aa3.91□□□□□ -1.78
CAPN3-213ENST00000565173 UQCRQO14949 82 aa3.9□□□□□ -1.79
CAPN3-213ENST00000565173 MT1BP07438 61 aa3.9□□□□□ -1.79
CAPN3-213ENST00000565173 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
CAPN3-213ENST00000565173 MT-ATP8P03928 68 aa3.89□□□□□ -1.79
CAPN3-213ENST00000565173 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
CAPN3-213ENST00000565173 H0Y9P7 68 aa3.87□□□□□ -1.79
CAPN3-213ENST00000565173 SCGB1A1P11684 91 aa3.87□□□□□ -1.79
CAPN3-213ENST00000565173 C5orf47Q569G3 176 aa3.87□□□□□ -1.79
CAPN3-213ENST00000565173 SPRR2GQ9BYE4 73 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms