RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
GINS3-205ENST00000564814 LINC00304Q8N9R0 145 aa4.34□□□□□ -1.71
GINS3-205ENST00000564814 ATP5EP2Q5VTU8 51 aa4.33□□□□□ -1.72
GINS3-205ENST00000564814 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
GINS3-205ENST00000564814 UBL5Q9BZL1 73 aa4.32□□□□□ -1.72
GINS3-205ENST00000564814 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
GINS3-205ENST00000564814 FAM236AA0A1B0GUQ0 79 aa4.31□□□□□ -1.72
GINS3-205ENST00000564814 FAM236BA0A1B0GV22 79 aa4.31□□□□□ -1.72
GINS3-205ENST00000564814 LIMD2Q9BT23 127 aa4.31□□□□□ -1.72
GINS3-205ENST00000564814 LINC00846Q9NV44 126 aa4.31□□□□□ -1.72
GINS3-205ENST00000564814 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
GINS3-205ENST00000564814 LRP2P98164 4655 aa4.3□□□□□ -1.72
GINS3-205ENST00000564814 TNXBP22105 4242 aa4.3□□□□□ -1.72
GINS3-205ENST00000564814 ATOX1O00244 68 aa4.3□□□□□ -1.72
GINS3-205ENST00000564814 IGKV3D-7A0A0C4DH55 119 aa4.28□□□□□ -1.72
GINS3-205ENST00000564814 A0A087WSZ3 146 aa4.27□□□□□ -1.73
GINS3-205ENST00000564814 A0A0G2JQZ4 141 aa4.27□□□□□ -1.73
GINS3-205ENST00000564814 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
GINS3-205ENST00000564814 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
GINS3-205ENST00000564814 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
GINS3-205ENST00000564814 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
GINS3-205ENST00000564814 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
GINS3-205ENST00000564814 UQCRQO14949 82 aa4.25□□□□□ -1.73
GINS3-205ENST00000564814 FP248Q71RG6 208 aaPredicted RBP4.25□□□□□ -1.73
GINS3-205ENST00000564814 Q96NJ1 140 aa4.25□□□□□ -1.73
GINS3-205ENST00000564814 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
GINS3-205ENST00000564814 J3KT08 172 aa4.24□□□□□ -1.73
GINS3-205ENST00000564814 CXCL6P80162 114 aa4.24□□□□□ -1.73
GINS3-205ENST00000564814 C1orf195Q5TG92 126 aa4.24□□□□□ -1.73
GINS3-205ENST00000564814 COX7CP15954 63 aa4.23□□□□□ -1.73
GINS3-205ENST00000564814 Q6ZVQ6 151 aa4.23□□□□□ -1.73
GINS3-205ENST00000564814 NREPQ16612 68 aa4.22□□□□□ -1.73
GINS3-205ENST00000564814 HRCT1Q6UXD1 115 aa4.22□□□□□ -1.73
GINS3-205ENST00000564814 SMIM20Q8N5G0 67 aa4.22□□□□□ -1.73
GINS3-205ENST00000564814 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
GINS3-205ENST00000564814 SERP2Q8N6R1 65 aa4.21□□□□□ -1.74
GINS3-205ENST00000564814 A0A087WVE0 104 aa4.2□□□□□ -1.74
GINS3-205ENST00000564814 A8MWP4 228 aa4.18□□□□□ -1.74
GINS3-205ENST00000564814 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
GINS3-205ENST00000564814 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
GINS3-205ENST00000564814 BPY2O14599 106 aa4.17□□□□□ -1.74
GINS3-205ENST00000564814 IGKV4-1P06312 121 aa4.17□□□□□ -1.74
GINS3-205ENST00000564814 DSCR10P59022 87 aa4.17□□□□□ -1.74
GINS3-205ENST00000564814 TRAV7A0A075B6U4 112 aa4.16□□□□□ -1.74
GINS3-205ENST00000564814 C8orf87E5RJ46 101 aa4.16□□□□□ -1.74
GINS3-205ENST00000564814 PRR15Q8IV56 129 aa4.16□□□□□ -1.74
GINS3-205ENST00000564814 A0A1B0GVX0 72 aa4.15□□□□□ -1.75
GINS3-205ENST00000564814 NDUFB1O75438 58 aa4.15□□□□□ -1.75
GINS3-205ENST00000564814 KRTAP13-3Q3SY46 172 aa4.15□□□□□ -1.75
GINS3-205ENST00000564814 LPAP08519 4548 aa4.15□□□□□ -1.75
GINS3-205ENST00000564814 IGLV7-46A0A075B6I9 117 aa4.14□□□□□ -1.75
GINS3-205ENST00000564814 TMEM258P61165 79 aa4.14□□□□□ -1.75
GINS3-205ENST00000564814 RETNLBQ9BQ08 111 aa4.14□□□□□ -1.75
GINS3-205ENST00000564814 K7EQZ3 153 aa4.12□□□□□ -1.75
GINS3-205ENST00000564814 KRTAP16-1A8MUX0 517 aa4.11□□□□□ -1.75
GINS3-205ENST00000564814 PRR4Q16378 134 aa4.11□□□□□ -1.75
GINS3-205ENST00000564814 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
GINS3-205ENST00000564814 MMP24-AS1A0A0U1RRL7 71 aa4.1□□□□□ -1.75
GINS3-205ENST00000564814 NDUFC1O43677 76 aa4.1□□□□□ -1.75
GINS3-205ENST00000564814 LINC00313P59037 77 aa4.1□□□□□ -1.75
GINS3-205ENST00000564814 C20orf197Q8N268 126 aa4.1□□□□□ -1.75
GINS3-205ENST00000564814 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
GINS3-205ENST00000564814 C8orf17Q9NRJ1 99 aa4.1□□□□□ -1.75
GINS3-205ENST00000564814 Q8N9P0 234 aaPredicted RBP4.09□□□□□ -1.75
GINS3-205ENST00000564814 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
GINS3-205ENST00000564814 A8MUU9 505 aa4.08□□□□□ -1.76
GINS3-205ENST00000564814 Q75L30 129 aa4.08□□□□□ -1.76
GINS3-205ENST00000564814 TMEM254Q8TBM7 123 aa4.08□□□□□ -1.76
GINS3-205ENST00000564814 FAM236DA0A1B0GTK5 79 aa4.07□□□□□ -1.76
GINS3-205ENST00000564814 hDV103S1A0JD37 113 aa4.07□□□□□ -1.76
GINS3-205ENST00000564814 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
GINS3-205ENST00000564814 FAM236CP0DP71 79 aa4.07□□□□□ -1.76
GINS3-205ENST00000564814 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
GINS3-205ENST00000564814 RPS28P62857 69 aaKnown RBP4.07□□□□□ -1.76
GINS3-205ENST00000564814 KLKP1Q107X0 134 aa4.07□□□□□ -1.76
GINS3-205ENST00000564814 NOTCH2NLQ7Z3S9 236 aa4.07□□□□□ -1.76
GINS3-205ENST00000564814 Q8N9L7 120 aa4.07□□□□□ -1.76
GINS3-205ENST00000564814 MRPL34Q9BQ48 92 aaKnown RBP4.06□□□□□ -1.76
GINS3-205ENST00000564814 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
GINS3-205ENST00000564814 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
GINS3-205ENST00000564814 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
GINS3-205ENST00000564814 C9orf92A6NGG3 77 aa4.03□□□□□ -1.76
GINS3-205ENST00000564814 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
GINS3-205ENST00000564814 CYSTM1Q9H1C7 97 aa4.03□□□□□ -1.76
GINS3-205ENST00000564814 SNURFQ9Y675 71 aa4.03□□□□□ -1.76
GINS3-205ENST00000564814 H7BZZ5 65 aa4.02□□□□□ -1.77
GINS3-205ENST00000564814 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
GINS3-205ENST00000564814 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
GINS3-205ENST00000564814 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
GINS3-205ENST00000564814 C5orf47Q569G3 176 aa4.01□□□□□ -1.77
GINS3-205ENST00000564814 A0A0U1RQV1 116 aa4□□□□□ -1.77
GINS3-205ENST00000564814 MP68P56378 58 aa4□□□□□ -1.77
GINS3-205ENST00000564814 LCE4AQ5TA78 99 aa4□□□□□ -1.77
GINS3-205ENST00000564814 WFDC13Q8IUB5 93 aa4□□□□□ -1.77
GINS3-205ENST00000564814 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
GINS3-205ENST00000564814 MUC17Q685J3 4493 aa3.98□□□□□ -1.77
GINS3-205ENST00000564814 ZCCHC13Q8WW36 166 aaKnown RBP3.98□□□□□ -1.77
GINS3-205ENST00000564814 H3BPC8 53 aa3.97□□□□□ -1.77
GINS3-205ENST00000564814 ATP11AUNQ6ZP68 121 aa3.97□□□□□ -1.77
GINS3-205ENST00000564814 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms