RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 FLNCQ14315 2725 aa1.99□□□□□ -2.09
CDH1-207ENST00000564745 LAMA5O15230 3695 aa1.99□□□□□ -2.09
CDH1-207ENST00000564745 FLNAP21333 2647 aaKnown RBP1.99□□□□□ -2.09
CDH1-207ENST00000564745 ITPR1Q14643 2758 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 COL6A5A8TX70 2615 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 DEFB131BA0A096LNP1 70 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 SPRR1AP35321 89 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 SPATA8Q6RVD6 105 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 CLPSL2Q6UWE3 100 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 Q6ZRX8 168 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 WFDC13Q8IUB5 93 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 DEFB105AQ8NG35 78 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 CEP295Q9C0D2 2601 aa1.98□□□□□ -2.09
CDH1-207ENST00000564745 URB1O60287 2271 aaKnown RBP1.97□□□□□ -2.09
CDH1-207ENST00000564745 NBEAL2Q6ZNJ1 2754 aa1.97□□□□□ -2.09
CDH1-207ENST00000564745 B4DSR2 109 aa1.97□□□□□ -2.09
CDH1-207ENST00000564745 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
CDH1-207ENST00000564745 LELP1Q5T871 98 aa1.97□□□□□ -2.09
CDH1-207ENST00000564745 WFDC10BQ8IUB3 73 aa1.97□□□□□ -2.09
CDH1-207ENST00000564745 DMXL2Q8TDJ6 3036 aa1.97□□□□□ -2.09
CDH1-207ENST00000564745 SPENQ96T58 3664 aaKnown RBP1.97□□□□□ -2.09
CDH1-207ENST00000564745 MGAQ8IWI9 3026 aa1.96□□□□□ -2.1
CDH1-207ENST00000564745 IGLV1-51P01701 117 aa1.96□□□□□ -2.1
CDH1-207ENST00000564745 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
CDH1-207ENST00000564745 DEFB136Q30KP8 78 aa1.96□□□□□ -2.1
CDH1-207ENST00000564745 DEFB124Q8NES8 71 aa1.96□□□□□ -2.1
CDH1-207ENST00000564745 HIVEP3Q5T1R4 2406 aa1.96□□□□□ -2.1
CDH1-207ENST00000564745 NF1P21359 2839 aa1.95□□□□□ -2.1
CDH1-207ENST00000564745 TACC2O95359 2948 aa1.95□□□□□ -2.1
CDH1-207ENST00000564745 DEFB130BP0DP73 79 aa1.95□□□□□ -2.1
CDH1-207ENST00000564745 DEFB130AP0DP74 79 aa1.95□□□□□ -2.1
CDH1-207ENST00000564745 LINC00472Q9H8W2 130 aa1.95□□□□□ -2.1
CDH1-207ENST00000564745 SDK1Q7Z5N4 2213 aa1.95□□□□□ -2.1
CDH1-207ENST00000564745 PRRC2CQ9Y520 2896 aaKnown RBP1.95□□□□□ -2.1
CDH1-207ENST00000564745 RYR1P21817 5038 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 HYDINQ4G0P3 5121 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 A0A087WSZ3 146 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 MMP24-AS1A0A0U1RRL7 71 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 KRTAP26-1Q6PEX3 210 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 PSORS1C2Q9UIG4 136 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 COL12A1Q99715 3063 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 KIAA1109Q2LD37 5005 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 ROS1P08922 2347 aa1.94□□□□□ -2.1
CDH1-207ENST00000564745 ANKHD1Q8IWZ3 2542 aaKnown RBP1.93□□□□□ -2.1
CDH1-207ENST00000564745 AKAP13Q12802 2813 aa1.93□□□□□ -2.1
CDH1-207ENST00000564745 A0A096LPF7 62 aa1.93□□□□□ -2.1
CDH1-207ENST00000564745 UQCR11O14957 56 aa1.93□□□□□ -2.1
CDH1-207ENST00000564745 ACYP2P14621 99 aa1.93□□□□□ -2.1
CDH1-207ENST00000564745 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
CDH1-207ENST00000564745 PCOTHQ58A44 107 aa1.93□□□□□ -2.1
CDH1-207ENST00000564745 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
CDH1-207ENST00000564745 PKDREJQ9NTG1 2253 aa1.93□□□□□ -2.1
CDH1-207ENST00000564745 EPPK1P58107 5090 aaKnown RBP1.92□□□□□ -2.1
CDH1-207ENST00000564745 ADGRG4Q8IZF6 3080 aa1.92□□□□□ -2.1
CDH1-207ENST00000564745 KMT2CQ8NEZ4 4911 aaKnown RBP1.92□□□□□ -2.1
CDH1-207ENST00000564745 A0A1B0GU69 56 aa1.92□□□□□ -2.1
CDH1-207ENST00000564745 SPRR1BP22528 89 aa1.92□□□□□ -2.1
CDH1-207ENST00000564745 ROMO1P60602 79 aa1.92□□□□□ -2.1
CDH1-207ENST00000564745 RPL37AP61513 92 aaKnown RBP1.92□□□□□ -2.1
CDH1-207ENST00000564745 C1orf134Q5TEV5 83 aa1.92□□□□□ -2.1
CDH1-207ENST00000564745 BOD1L1Q8NFC6 3051 aa1.92□□□□□ -2.1
CDH1-207ENST00000564745 SPTBN1Q01082 2364 aaKnown RBP1.92□□□□□ -2.1
CDH1-207ENST00000564745 WNK1Q9H4A3 2382 aa1.92□□□□□ -2.1
CDH1-207ENST00000564745 CSPG4Q6UVK1 2322 aa1.91□□□□□ -2.1
CDH1-207ENST00000564745 NBASA2RRP1 2371 aa1.91□□□□□ -2.1
CDH1-207ENST00000564745 A0A0G2JQZ4 141 aa1.91□□□□□ -2.1
CDH1-207ENST00000564745 CCL19Q99731 98 aa1.91□□□□□ -2.1
CDH1-207ENST00000564745 TLN2Q9Y4G6 2542 aa1.9□□□□□ -2.1
CDH1-207ENST00000564745 USP9YO00507 2555 aaPredicted RBP1.9□□□□□ -2.11
CDH1-207ENST00000564745 H3BNG1 76 aa1.9□□□□□ -2.11
CDH1-207ENST00000564745 DMAC1Q96GE9 116 aa1.9□□□□□ -2.11
CDH1-207ENST00000564745 COL6A6A6NMZ7 2263 aa1.9□□□□□ -2.11
CDH1-207ENST00000564745 UTP20O75691 2785 aaKnown RBP1.9□□□□□ -2.11
CDH1-207ENST00000564745 MED13LQ71F56 2210 aa1.9□□□□□ -2.11
CDH1-207ENST00000564745 SPART-AS1P0CW21 52 aa1.89□□□□□ -2.11
CDH1-207ENST00000564745 MRPL34Q9BQ48 92 aaKnown RBP1.89□□□□□ -2.11
CDH1-207ENST00000564745 PKD1L1Q8TDX9 2849 aa1.89□□□□□ -2.11
CDH1-207ENST00000564745 DCHS2Q6V1P9 2916 aa1.88□□□□□ -2.11
CDH1-207ENST00000564745 TPRXLQ17RH7 258 aa1.88□□□□□ -2.11
CDH1-207ENST00000564745 RYR2Q92736 4967 aa1.88□□□□□ -2.11
CDH1-207ENST00000564745 SVEP1Q4LDE5 3571 aa1.87□□□□□ -2.11
CDH1-207ENST00000564745 CR1P17927 2039 aa1.87□□□□□ -2.11
CDH1-207ENST00000564745 ACACAQ13085 2346 aa1.87□□□□□ -2.11
CDH1-207ENST00000564745 LINC01556Q5JQF7 62 aa1.87□□□□□ -2.11
CDH1-207ENST00000564745 Q96NJ1 140 aa1.87□□□□□ -2.11
CDH1-207ENST00000564745 CELSR1Q9NYQ6 3014 aa1.87□□□□□ -2.11
CDH1-207ENST00000564745 APC2O95996 2303 aa1.86□□□□□ -2.11
CDH1-207ENST00000564745 MAP1AP78559 2803 aaPredicted RBP1.86□□□□□ -2.11
CDH1-207ENST00000564745 LRBAP50851 2863 aa1.86□□□□□ -2.11
CDH1-207ENST00000564745 SORL1Q92673 2214 aa1.86□□□□□ -2.11
CDH1-207ENST00000564745 KRTAP13-4Q3LI77 160 aa1.86□□□□□ -2.11
CDH1-207ENST00000564745 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.86□□□□□ -2.11
CDH1-207ENST00000564745 HIVEP1P15822 2718 aa1.86□□□□□ -2.11
CDH1-207ENST00000564745 HRNRQ86YZ3 2850 aaPredicted RBP1.85□□□□□ -2.11
CDH1-207ENST00000564745 HTN3P15516 51 aa1.85□□□□□ -2.11
CDH1-207ENST00000564745 PRO2289Q9P1D8 64 aa1.85□□□□□ -2.11
CDH1-207ENST00000564745 ITPR2Q14571 2701 aa1.85□□□□□ -2.11
CDH1-207ENST00000564745 OTOGQ6ZRI0 2925 aa1.84□□□□□ -2.11
CDH1-207ENST00000564745 CENPEQ02224 2701 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms