RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 LYRM7Q5U5X0 104 aa5.35□□□□□ -1.55
CDH1-206ENST00000564676 OBSCN-AS1Q96MR7 158 aa5.35□□□□□ -1.55
CDH1-206ENST00000564676 DSCR8Q96T75 97 aa5.35□□□□□ -1.55
CDH1-206ENST00000564676 VPS25Q9BRG1 176 aa5.35□□□□□ -1.55
CDH1-206ENST00000564676 Q96NJ1 140 aa5.33□□□□□ -1.56
CDH1-206ENST00000564676 SIGMAR1Q99720 223 aa5.33□□□□□ -1.56
CDH1-206ENST00000564676 TRBV20-1A0A075B6N2 111 aa5.32□□□□□ -1.56
CDH1-206ENST00000564676 C9JAW5 83 aa5.32□□□□□ -1.56
CDH1-206ENST00000564676 C9orf118A6NHY6 69 aa5.31□□□□□ -1.56
CDH1-206ENST00000564676 IGKV4-1P06312 121 aa5.31□□□□□ -1.56
CDH1-206ENST00000564676 JMJD7-PLA2G4BH0Y9G9 81 aa5.3□□□□□ -1.56
CDH1-206ENST00000564676 DEFB116Q30KQ4 102 aa5.3□□□□□ -1.56
CDH1-206ENST00000564676 Q75L30 129 aa5.3□□□□□ -1.56
CDH1-206ENST00000564676 TAX1BP3O14907 124 aa5.29□□□□□ -1.56
CDH1-206ENST00000564676 DSCR10P59022 87 aa5.29□□□□□ -1.56
CDH1-206ENST00000564676 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
CDH1-206ENST00000564676 ATP11AUNQ6ZP68 121 aa5.29□□□□□ -1.56
CDH1-206ENST00000564676 LINC00472Q9H8W2 130 aa5.29□□□□□ -1.56
CDH1-206ENST00000564676 C21orf62-AS1Q17RA5 79 aa5.28□□□□□ -1.56
CDH1-206ENST00000564676 A0A1W2PPM0 123 aa5.27□□□□□ -1.57
CDH1-206ENST00000564676 LOC110117498A0A087WWA1 95 aa5.26□□□□□ -1.57
CDH1-206ENST00000564676 PDE6GP18545 87 aa5.26□□□□□ -1.57
CDH1-206ENST00000564676 LINC00313P59037 77 aa5.26□□□□□ -1.57
CDH1-206ENST00000564676 Q6ZQT0 140 aa5.26□□□□□ -1.57
CDH1-206ENST00000564676 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
CDH1-206ENST00000564676 C14orf132Q9NPU4 83 aa5.25□□□□□ -1.57
CDH1-206ENST00000564676 IGHV6-1A0A0B4J1U7 121 aa5.24□□□□□ -1.57
CDH1-206ENST00000564676 A8MUU9 505 aa5.24□□□□□ -1.57
CDH1-206ENST00000564676 H3BT86 120 aa5.24□□□□□ -1.57
CDH1-206ENST00000564676 MTURNQ8N3F0 131 aa5.24□□□□□ -1.57
CDH1-206ENST00000564676 A0A1B0GW54 56 aa5.23□□□□□ -1.57
CDH1-206ENST00000564676 J3KT08 172 aa5.23□□□□□ -1.57
CDH1-206ENST00000564676 SPCS1Q9Y6A9 102 aa5.23□□□□□ -1.57
CDH1-206ENST00000564676 COL5A1-AS1Q5SY13 56 aa5.22□□□□□ -1.57
CDH1-206ENST00000564676 NOTCH2NLQ7Z3S9 236 aa5.22□□□□□ -1.57
CDH1-206ENST00000564676 A0A1B0GVX0 72 aa5.21□□□□□ -1.58
CDH1-206ENST00000564676 C8orf87E5RJ46 101 aa5.21□□□□□ -1.58
CDH1-206ENST00000564676 KRTAP16-1A8MUX0 517 aa5.2□□□□□ -1.58
CDH1-206ENST00000564676 NDUFB1O75438 58 aa5.2□□□□□ -1.58
CDH1-206ENST00000564676 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
CDH1-206ENST00000564676 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
CDH1-206ENST00000564676 PCP4L1A6NKN8 68 aa5.18□□□□□ -1.58
CDH1-206ENST00000564676 NREPQ16612 68 aa5.18□□□□□ -1.58
CDH1-206ENST00000564676 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
CDH1-206ENST00000564676 A8MWP4 228 aa5.16□□□□□ -1.58
CDH1-206ENST00000564676 IGKV3D-7A0A0C4DH55 119 aa5.14□□□□□ -1.59
CDH1-206ENST00000564676 K7EP34 96 aa5.14□□□□□ -1.59
CDH1-206ENST00000564676 MT1HP80294 61 aa5.14□□□□□ -1.59
CDH1-206ENST00000564676 C8orf17Q9NRJ1 99 aa5.13□□□□□ -1.59
CDH1-206ENST00000564676 M0R2T5 61 aa5.11□□□□□ -1.59
CDH1-206ENST00000564676 GTF2H5Q6ZYL4 71 aa5.11□□□□□ -1.59
CDH1-206ENST00000564676 PRR15Q8IV56 129 aa5.11□□□□□ -1.59
CDH1-206ENST00000564676 PRO0461Q9UI25 63 aa5.11□□□□□ -1.59
CDH1-206ENST00000564676 BPY2O14599 106 aa5.1□□□□□ -1.59
CDH1-206ENST00000564676 Q6ZVQ6 151 aa5.09□□□□□ -1.59
CDH1-206ENST00000564676 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
CDH1-206ENST00000564676 ZCCHC13Q8WW36 166 aaKnown RBP5.09□□□□□ -1.59
CDH1-206ENST00000564676 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
CDH1-206ENST00000564676 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
CDH1-206ENST00000564676 K7EQZ3 153 aa5.07□□□□□ -1.6
CDH1-206ENST00000564676 MMP24-AS1A0A0U1RRL7 71 aa5.06□□□□□ -1.6
CDH1-206ENST00000564676 FAM236DA0A1B0GTK5 79 aa5.06□□□□□ -1.6
CDH1-206ENST00000564676 FAM236CP0DP71 79 aa5.06□□□□□ -1.6
CDH1-206ENST00000564676 TMEM254Q8TBM7 123 aa5.06□□□□□ -1.6
CDH1-206ENST00000564676 MRPL34Q9BQ48 92 aaKnown RBP5.06□□□□□ -1.6
CDH1-206ENST00000564676 hDV103S1A0JD37 113 aa5.05□□□□□ -1.6
CDH1-206ENST00000564676 F8W1H4 67 aa5.05□□□□□ -1.6
CDH1-206ENST00000564676 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
CDH1-206ENST00000564676 RBM12B-AS1Q9P1G2 102 aa5.05□□□□□ -1.6
CDH1-206ENST00000564676 NDUFS5O43920 106 aa5.04□□□□□ -1.6
CDH1-206ENST00000564676 HRES1P13985 223 aa5.04□□□□□ -1.6
CDH1-206ENST00000564676 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
CDH1-206ENST00000564676 UBL5Q9BZL1 73 aa5.04□□□□□ -1.6
CDH1-206ENST00000564676 LINC00846Q9NV44 126 aa5.04□□□□□ -1.6
CDH1-206ENST00000564676 SPINK7P58062 85 aa5.03□□□□□ -1.6
CDH1-206ENST00000564676 ETDBQ3ZM63 59 aa5.02□□□□□ -1.61
CDH1-206ENST00000564676 Q8N9L7 120 aa5.02□□□□□ -1.61
CDH1-206ENST00000564676 WFDC13Q8IUB5 93 aa5.01□□□□□ -1.61
CDH1-206ENST00000564676 MPLKIPQ8TAP9 179 aa5□□□□□ -1.61
CDH1-206ENST00000564676 CASC2Q6XLA1 102 aa4.99□□□□□ -1.61
CDH1-206ENST00000564676 HCG22E2RYF7 251 aa4.96□□□□□ -1.62
CDH1-206ENST00000564676 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
CDH1-206ENST00000564676 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
CDH1-206ENST00000564676 Q5W150 140 aa4.93□□□□□ -1.62
CDH1-206ENST00000564676 CXCL6P80162 114 aa4.92□□□□□ -1.62
CDH1-206ENST00000564676 ACYP1P07311 99 aa4.9□□□□□ -1.63
CDH1-206ENST00000564676 C7orf65Q6ZTY9 151 aa4.9□□□□□ -1.63
CDH1-206ENST00000564676 A0A1B0GV90 55 aa4.88□□□□□ -1.63
CDH1-206ENST00000564676 FAM240AA0A1B0GVK7 77 aa4.87□□□□□ -1.63
CDH1-206ENST00000564676 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
CDH1-206ENST00000564676 TP53AIP1Q9HCN2 124 aa4.86□□□□□ -1.63
CDH1-206ENST00000564676 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.63
CDH1-206ENST00000564676 ATP5EP2Q5VTU8 51 aa4.84□□□□□ -1.63
CDH1-206ENST00000564676 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
CDH1-206ENST00000564676 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
CDH1-206ENST00000564676 MT2AP02795 61 aa4.82□□□□□ -1.64
CDH1-206ENST00000564676 C4orf26Q17RF5 130 aa4.82□□□□□ -1.64
CDH1-206ENST00000564676 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
CDH1-206ENST00000564676 MT1FP04733 61 aa4.79□□□□□ -1.64
CDH1-206ENST00000564676 LINC00643Q86TS7 51 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms