RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 CELSR2Q9HCU4 2923 aa3.6□□□□□ -1.83
TUBGCP4-207ENST00000563963 DEFB130BP0DP73 79 aa3.6□□□□□ -1.83
TUBGCP4-207ENST00000563963 DEFB130AP0DP74 79 aa3.6□□□□□ -1.83
TUBGCP4-207ENST00000563963 DNAH17Q9UFH2 4485 aa3.59□□□□□ -1.83
TUBGCP4-207ENST00000563963 PRO0255Q9UI72 69 aa3.58□□□□□ -1.84
TUBGCP4-207ENST00000563963 Q96NJ1 140 aa3.58□□□□□ -1.84
TUBGCP4-207ENST00000563963 NBDYA0A0U1RRE5 68 aa3.58□□□□□ -1.84
TUBGCP4-207ENST00000563963 KRTAP1-1Q07627 177 aa3.58□□□□□ -1.84
TUBGCP4-207ENST00000563963 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
TUBGCP4-207ENST00000563963 PKHD1P08F94 4074 aa3.58□□□□□ -1.84
TUBGCP4-207ENST00000563963 A0A1W2PPR1 153 aa3.57□□□□□ -1.84
TUBGCP4-207ENST00000563963 KRTAP29-1A8MX34 341 aaPredicted RBP3.57□□□□□ -1.84
TUBGCP4-207ENST00000563963 IGKV2-24A0A0C4DH68 120 aa3.56□□□□□ -1.84
TUBGCP4-207ENST00000563963 LINC00304Q8N9R0 145 aa3.56□□□□□ -1.84
TUBGCP4-207ENST00000563963 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
TUBGCP4-207ENST00000563963 STAB2Q8WWQ8 2551 aa3.55□□□□□ -1.84
TUBGCP4-207ENST00000563963 A0A1B0GU33 70 aa3.55□□□□□ -1.84
TUBGCP4-207ENST00000563963 KRTAP11-1Q8IUC1 163 aa3.55□□□□□ -1.84
TUBGCP4-207ENST00000563963 A0A096LPF7 62 aa3.54□□□□□ -1.84
TUBGCP4-207ENST00000563963 FLG2Q5D862 2391 aaPredicted RBP3.54□□□□□ -1.84
TUBGCP4-207ENST00000563963 A0A1W2PNN7 141 aa3.54□□□□□ -1.84
TUBGCP4-207ENST00000563963 UNQ6190/PRO20217Q6UXQ8 127 aa3.54□□□□□ -1.84
TUBGCP4-207ENST00000563963 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.85
TUBGCP4-207ENST00000563963 GVQW2A0A096LPI5 108 aaPredicted RBP3.52□□□□□ -1.85
TUBGCP4-207ENST00000563963 CRIPTQ9P021 101 aa3.52□□□□□ -1.85
TUBGCP4-207ENST00000563963 TENM3Q9P273 2699 aa3.52□□□□□ -1.85
TUBGCP4-207ENST00000563963 FBN1P35555 2871 aaKnown RBP3.51□□□□□ -1.85
TUBGCP4-207ENST00000563963 DNAH2Q9P225 4427 aa3.51□□□□□ -1.85
TUBGCP4-207ENST00000563963 PRRC2CQ9Y520 2896 aaKnown RBP3.51□□□□□ -1.85
TUBGCP4-207ENST00000563963 HTN3P15516 51 aa3.51□□□□□ -1.85
TUBGCP4-207ENST00000563963 LELP1Q5T871 98 aa3.51□□□□□ -1.85
TUBGCP4-207ENST00000563963 Q8N377 158 aa3.5□□□□□ -1.85
TUBGCP4-207ENST00000563963 LY6G6CO95867 125 aa3.49□□□□□ -1.85
TUBGCP4-207ENST00000563963 VWFP04275 2813 aa3.49□□□□□ -1.85
TUBGCP4-207ENST00000563963 MAPK1IP1LQ8NDC0 245 aa3.49□□□□□ -1.85
TUBGCP4-207ENST00000563963 COL12A1Q99715 3063 aa3.48□□□□□ -1.85
TUBGCP4-207ENST00000563963 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
TUBGCP4-207ENST00000563963 SPART-AS1P0CW21 52 aa3.48□□□□□ -1.85
TUBGCP4-207ENST00000563963 DNAH9Q9NYC9 4486 aa3.48□□□□□ -1.85
TUBGCP4-207ENST00000563963 NSD1Q96L73 2696 aaPredicted RBP3.48□□□□□ -1.85
TUBGCP4-207ENST00000563963 PSORS1C2Q9UIG4 136 aa3.47□□□□□ -1.85
TUBGCP4-207ENST00000563963 A0A0G2JQZ4 141 aa3.46□□□□□ -1.86
TUBGCP4-207ENST00000563963 GIG44P09565 113 aaPredicted RBP3.46□□□□□ -1.86
TUBGCP4-207ENST00000563963 Q8N1X5 172 aa3.45□□□□□ -1.86
TUBGCP4-207ENST00000563963 CRYBG3Q68DQ2 2970 aa3.44□□□□□ -1.86
TUBGCP4-207ENST00000563963 Q6ZRX8 168 aa3.44□□□□□ -1.86
TUBGCP4-207ENST00000563963 MRPL34Q9BQ48 92 aaKnown RBP3.44□□□□□ -1.86
TUBGCP4-207ENST00000563963 PDZD2O15018 2839 aa3.44□□□□□ -1.86
TUBGCP4-207ENST00000563963 ANAPC11Q9NYG5 84 aa3.44□□□□□ -1.86
TUBGCP4-207ENST00000563963 MMP24-AS1A0A0U1RRL7 71 aa3.43□□□□□ -1.86
TUBGCP4-207ENST00000563963 DEFB135Q30KP9 77 aa3.43□□□□□ -1.86
TUBGCP4-207ENST00000563963 TNXBP22105 4242 aa3.43□□□□□ -1.86
TUBGCP4-207ENST00000563963 NF1P21359 2839 aa3.42□□□□□ -1.86
TUBGCP4-207ENST00000563963 DEFB4AO15263 64 aa3.42□□□□□ -1.86
TUBGCP4-207ENST00000563963 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
TUBGCP4-207ENST00000563963 TGP01266 2768 aa3.41□□□□□ -1.86
TUBGCP4-207ENST00000563963 TYMSOSQ8TAI1 123 aa3.4□□□□□ -1.86
TUBGCP4-207ENST00000563963 KRTAP9-2Q9BYQ4 174 aa3.4□□□□□ -1.86
TUBGCP4-207ENST00000563963 HSPG2P98160 4391 aa3.4□□□□□ -1.87
TUBGCP4-207ENST00000563963 NIPBLQ6KC79 2804 aaeCLIP3.4□□□□□ -1.87
TUBGCP4-207ENST00000563963 IGFL1Q6UW32 110 aa3.4□□□□□ -1.87
TUBGCP4-207ENST00000563963 R4GN34 69 aa3.4□□□□□ -1.87
TUBGCP4-207ENST00000563963 DNAH11Q96DT5 4516 aa3.39□□□□□ -1.87
TUBGCP4-207ENST00000563963 BIRC6Q9NR09 4857 aa3.39□□□□□ -1.87
TUBGCP4-207ENST00000563963 TENM2Q9NT68 2774 aa3.39□□□□□ -1.87
TUBGCP4-207ENST00000563963 H3BNG1 76 aa3.37□□□□□ -1.87
TUBGCP4-207ENST00000563963 PLAC4Q8WY50 150 aa3.36□□□□□ -1.87
TUBGCP4-207ENST00000563963 APCP25054 2843 aa3.35□□□□□ -1.87
TUBGCP4-207ENST00000563963 C14orf177Q52M58 125 aa3.35□□□□□ -1.87
TUBGCP4-207ENST00000563963 LINC01556Q5JQF7 62 aa3.35□□□□□ -1.87
TUBGCP4-207ENST00000563963 PRLHP81277 87 aa3.35□□□□□ -1.87
TUBGCP4-207ENST00000563963 H0YAA0 97 aa3.34□□□□□ -1.88
TUBGCP4-207ENST00000563963 SPRR1AP35321 89 aa3.33□□□□□ -1.88
TUBGCP4-207ENST00000563963 SPINK1P00995 79 aa3.33□□□□□ -1.88
TUBGCP4-207ENST00000563963 TPRXLQ17RH7 258 aa3.33□□□□□ -1.88
TUBGCP4-207ENST00000563963 COX6B2Q6YFQ2 88 aa3.33□□□□□ -1.88
TUBGCP4-207ENST00000563963 UBE2DNLQ8IWF7 75 aa3.33□□□□□ -1.88
TUBGCP4-207ENST00000563963 H1FX-AS1Q4G0G2 97 aa3.32□□□□□ -1.88
TUBGCP4-207ENST00000563963 TENM1Q9UKZ4 2725 aa3.31□□□□□ -1.88
TUBGCP4-207ENST00000563963 MXRA5Q9NR99 2828 aa3.31□□□□□ -1.88
TUBGCP4-207ENST00000563963 Q6ZSA8 131 aa3.31□□□□□ -1.88
TUBGCP4-207ENST00000563963 COL7A1Q02388 2944 aa3.31□□□□□ -1.88
TUBGCP4-207ENST00000563963 DNAH10Q8IVF4 4471 aa3.31□□□□□ -1.88
TUBGCP4-207ENST00000563963 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
TUBGCP4-207ENST00000563963 FAT2Q9NYQ8 4349 aa3.29□□□□□ -1.88
TUBGCP4-207ENST00000563963 DNHD1Q96M86 4753 aa3.29□□□□□ -1.88
TUBGCP4-207ENST00000563963 LRBAP50851 2863 aa3.29□□□□□ -1.88
TUBGCP4-207ENST00000563963 TACC2O95359 2948 aa3.28□□□□□ -1.88
TUBGCP4-207ENST00000563963 SPACA4Q8TDM5 124 aa3.28□□□□□ -1.89
TUBGCP4-207ENST00000563963 A0A096LNI7 61 aa3.27□□□□□ -1.89
TUBGCP4-207ENST00000563963 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
TUBGCP4-207ENST00000563963 MAP1AP78559 2803 aaPredicted RBP3.25□□□□□ -1.89
TUBGCP4-207ENST00000563963 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
TUBGCP4-207ENST00000563963 PKD1P98161 4303 aa3.25□□□□□ -1.89
TUBGCP4-207ENST00000563963 SPRR1BP22528 89 aa3.24□□□□□ -1.89
TUBGCP4-207ENST00000563963 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
TUBGCP4-207ENST00000563963 HRNRQ86YZ3 2850 aaPredicted RBP3.24□□□□□ -1.89
TUBGCP4-207ENST00000563963 K7EIL1 84 aa3.23□□□□□ -1.89
TUBGCP4-207ENST00000563963 INE1O15225 51 aa3.23□□□□□ -1.89
TUBGCP4-207ENST00000563963 KRTAP10-3P60369 221 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms