RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 MYO18BQ8IUG5 2567 aa-0.32□□□□□ -2.46
HMGB1P33-201ENST00000563485 DNAH8Q96JB1 4490 aa-0.32□□□□□ -2.46
HMGB1P33-201ENST00000563485 CDC42BPGQ6DT37 1551 aa-0.32□□□□□ -2.46
HMGB1P33-201ENST00000563485 NRAPQ86VF7 1730 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 ACACAQ13085 2346 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 USH2AO75445 5202 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 ETDCA0A1B0GVM5 59 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 CRIP1P50238 77 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 ENHOQ6UWT2 76 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 DIP2AQ14689 1571 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 MYO5CQ9NQX4 1742 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 DUOX2Q9NRD8 1548 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 UGGT2Q9NYU1 1516 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 ITSN2Q9NZM3 1697 aa-0.33□□□□□ -2.46
HMGB1P33-201ENST00000563485 H3BNG1 76 aa-0.34□□□□□ -2.46
HMGB1P33-201ENST00000563485 MGAM2Q2M2H8 2515 aa-0.34□□□□□ -2.46
HMGB1P33-201ENST00000563485 PDCD5O14737 125 aa-0.35□□□□□ -2.47
HMGB1P33-201ENST00000563485 KRTAP19-8Q3LI54 63 aa-0.35□□□□□ -2.47
HMGB1P33-201ENST00000563485 SMCO4Q9NRQ5 59 aa-0.35□□□□□ -2.47
HMGB1P33-201ENST00000563485 S4R3F8 94 aa-0.35□□□□□ -2.47
HMGB1P33-201ENST00000563485 RIF1Q5UIP0 2472 aaKnown RBP-0.35□□□□□ -2.47
HMGB1P33-201ENST00000563485 IQGAP3Q86VI3 1631 aa-0.35□□□□□ -2.47
HMGB1P33-201ENST00000563485 WDR87Q6ZQQ6 2873 aa-0.35□□□□□ -2.47
HMGB1P33-201ENST00000563485 C3P01024 1663 aa-0.36□□□□□ -2.47
HMGB1P33-201ENST00000563485 ASXL1Q8IXJ9 1541 aa-0.36□□□□□ -2.47
HMGB1P33-201ENST00000563485 DEFA5Q01523 94 aa-0.36□□□□□ -2.47
HMGB1P33-201ENST00000563485 ATXN8Q156A1 80 aa-0.36□□□□□ -2.47
HMGB1P33-201ENST00000563485 RANBP2P49792 3224 aaKnown RBP-0.36□□□□□ -2.47
HMGB1P33-201ENST00000563485 EPPK1P58107 5090 aaKnown RBP-0.36□□□□□ -2.47
HMGB1P33-201ENST00000563485 ABCA9Q8IUA7 1624 aa-0.37□□□□□ -2.47
HMGB1P33-201ENST00000563485 WT1-ASQ06250 92 aa-0.37□□□□□ -2.47
HMGB1P33-201ENST00000563485 ACACBO00763 2458 aa-0.37□□□□□ -2.47
HMGB1P33-201ENST00000563485 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.37□□□□□ -2.47
HMGB1P33-201ENST00000563485 H3BVH4 76 aa-0.38□□□□□ -2.47
HMGB1P33-201ENST00000563485 RPS27P42677 84 aaKnown RBP-0.38□□□□□ -2.47
HMGB1P33-201ENST00000563485 RPS27LQ71UM5 84 aaKnown RBP-0.38□□□□□ -2.47
HMGB1P33-201ENST00000563485 CLASP1Q7Z460 1538 aa-0.38□□□□□ -2.47
HMGB1P33-201ENST00000563485 RELNP78509 3460 aa-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 USP9YO00507 2555 aaPredicted RBP-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 KIF1AQ12756 1690 aa-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 DEFB106AQ8N104 65 aa-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 CCDC168Q8NDH2 2452 aa-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 ABCC6O95255 1503 aa-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 RYR1P21817 5038 aa-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 HERC2O95714 4834 aa-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 TRIOO75962 3097 aa-0.39□□□□□ -2.47
HMGB1P33-201ENST00000563485 DNAH7Q8WXX0 4024 aa-0.4□□□□□ -2.47
HMGB1P33-201ENST00000563485 FRYQ5TBA9 3013 aa-0.4□□□□□ -2.47
HMGB1P33-201ENST00000563485 DNMBPQ6XZF7 1577 aa-0.4□□□□□ -2.47
HMGB1P33-201ENST00000563485 TOGARAM1Q9Y4F4 1720 aa-0.4□□□□□ -2.47
HMGB1P33-201ENST00000563485 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.4□□□□□ -2.47
HMGB1P33-201ENST00000563485 COL12A1Q99715 3063 aa-0.4□□□□□ -2.47
HMGB1P33-201ENST00000563485 SPTBN5Q9NRC6 3674 aaKnown RBP-0.4□□□□□ -2.47
HMGB1P33-201ENST00000563485 CMYA5Q8N3K9 4069 aa-0.41□□□□□ -2.47
HMGB1P33-201ENST00000563485 K7EMI3 77 aa-0.41□□□□□ -2.48
HMGB1P33-201ENST00000563485 MINOS1Q5TGZ0 78 aa-0.41□□□□□ -2.48
HMGB1P33-201ENST00000563485 USP9XQ93008 2570 aaPredicted RBP-0.41□□□□□ -2.48
HMGB1P33-201ENST00000563485 MROH1Q8NDA8 1641 aa-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 SPENQ96T58 3664 aaKnown RBP-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 ANKRD36CQ5JPF3 1778 aa-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 TLN2Q9Y4G6 2542 aa-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 IGLV5-48A0A075B6I7 105 aa-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 H3BUA1 57 aa-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 C6orf48Q9UBA6 75 aa-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 HILPDAQ9Y5L2 63 aa-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 A0A0C4DFX4 3053 aa-0.42□□□□□ -2.48
HMGB1P33-201ENST00000563485 EFCAB5A4FU69 1503 aa-0.43□□□□□ -2.48
HMGB1P33-201ENST00000563485 MT4P47944 62 aa-0.43□□□□□ -2.48
HMGB1P33-201ENST00000563485 PLECQ15149 4684 aaKnown RBP-0.43□□□□□ -2.48
HMGB1P33-201ENST00000563485 MADDQ8WXG6 1647 aa-0.43□□□□□ -2.48
HMGB1P33-201ENST00000563485 MT1HP80294 61 aa-0.44□□□□□ -2.48
HMGB1P33-201ENST00000563485 KRTAP19-5Q3LI72 72 aa-0.44□□□□□ -2.48
HMGB1P33-201ENST00000563485 GNG13Q9P2W3 67 aa-0.44□□□□□ -2.48
HMGB1P33-201ENST00000563485 TEX15Q9BXT5 2789 aa-0.44□□□□□ -2.48
HMGB1P33-201ENST00000563485 TIAM1Q13009 1591 aa-0.45□□□□□ -2.48
HMGB1P33-201ENST00000563485 A0A087WWC5 75 aa-0.45□□□□□ -2.48
HMGB1P33-201ENST00000563485 MMP24-AS1A0A0U1RRL7 71 aa-0.45□□□□□ -2.48
HMGB1P33-201ENST00000563485 NOP10Q9NPE3 64 aaKnown RBP-0.45□□□□□ -2.48
HMGB1P33-201ENST00000563485 RNF213Q63HN8 5207 aa-0.45□□□□□ -2.48
HMGB1P33-201ENST00000563485 ABCA6Q8N139 1617 aa-0.46□□□□□ -2.48
HMGB1P33-201ENST00000563485 LY75O60449 1722 aa-0.46□□□□□ -2.48
HMGB1P33-201ENST00000563485 ITPR1Q14643 2758 aa-0.46□□□□□ -2.48
HMGB1P33-201ENST00000563485 LINC01549A6NIU2 74 aa-0.46□□□□□ -2.48
HMGB1P33-201ENST00000563485 KRTAP20-2Q3LI61 65 aa-0.46□□□□□ -2.48
HMGB1P33-201ENST00000563485 DNHD1Q96M86 4753 aa-0.46□□□□□ -2.48
HMGB1P33-201ENST00000563485 TNP1P09430 55 aa-0.47□□□□□ -2.48
HMGB1P33-201ENST00000563485 SERF2P84101 59 aa-0.47□□□□□ -2.48
HMGB1P33-201ENST00000563485 DEFB110Q30KQ9 67 aa-0.47□□□□□ -2.48
HMGB1P33-201ENST00000563485 BIRC6Q9NR09 4857 aa-0.47□□□□□ -2.48
HMGB1P33-201ENST00000563485 C5orf42Q9H799 3197 aa-0.47□□□□□ -2.49
HMGB1P33-201ENST00000563485 HYDINQ4G0P3 5121 aa-0.48□□□□□ -2.49
HMGB1P33-201ENST00000563485 CROCC2H7BZ55 1655 aa-0.48□□□□□ -2.49
HMGB1P33-201ENST00000563485 NCBP2-AS2Q69YL0 99 aa-0.48□□□□□ -2.49
HMGB1P33-201ENST00000563485 KRTAP8-1Q8IUC2 63 aa-0.48□□□□□ -2.49
HMGB1P33-201ENST00000563485 CDC42BPAQ5VT25 1732 aa-0.48□□□□□ -2.49
HMGB1P33-201ENST00000563485 GLI2P10070 1586 aa-0.49□□□□□ -2.49
HMGB1P33-201ENST00000563485 FCER1GP30273 86 aa-0.49□□□□□ -2.49
HMGB1P33-201ENST00000563485 CELSR3Q9NYQ7 3312 aa-0.49□□□□□ -2.49
HMGB1P33-201ENST00000563485 LAMA3Q16787 3333 aa-0.49□□□□□ -2.49
HMGB1P33-201ENST00000563485 DYNC1H1Q14204 4646 aaKnown RBP-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms