RNA–Protein interactions for RNA: ENST00000563200.5

PPP4C-205, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-205	ENST00000563200	ETDB	Q3ZM63	59 aa		11.32	□□□□□ -0.6
PPP4C-205	ENST00000563200	FSIP2	Q5CZC0	6907 aa		11.3	□□□□□ -0.6
PPP4C-205	ENST00000563200		A0A1B0GV72	72 aa		11.3	□□□□□ -0.6
PPP4C-205	ENST00000563200	TRAC	P01848	142 aa		11.27	□□□□□ -0.6
PPP4C-205	ENST00000563200	DSCR10	P59022	87 aa		11.26	□□□□□ -0.61
PPP4C-205	ENST00000563200		H3BT86	120 aa		11.24	□□□□□ -0.61
PPP4C-205	ENST00000563200		M0R2T5	61 aa		11.24	□□□□□ -0.61
PPP4C-205	ENST00000563200	CCK	P06307	115 aa		11.24	□□□□□ -0.61
PPP4C-205	ENST00000563200	LINC00472	Q9H8W2	130 aa		11.24	□□□□□ -0.61
PPP4C-205	ENST00000563200	IGKV4-1	P06312	121 aa		11.22	□□□□□ -0.61
PPP4C-205	ENST00000563200	MTURN	Q8N3F0	131 aa		11.22	□□□□□ -0.61
PPP4C-205	ENST00000563200	KRTAP16-1	A8MUX0	517 aa		11.21	□□□□□ -0.61
PPP4C-205	ENST00000563200	SMCP	P49901	116 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4C-205	ENST00000563200	LINC00313	P59037	77 aa		11.19	□□□□□ -0.62
PPP4C-205	ENST00000563200		C9JAW5	83 aa		11.18	□□□□□ -0.62
PPP4C-205	ENST00000563200	C21orf62-AS1	Q17RA5	79 aa		11.18	□□□□□ -0.62
PPP4C-205	ENST00000563200	DEFB116	Q30KQ4	102 aa		11.18	□□□□□ -0.62
PPP4C-205	ENST00000563200	NOTCH2NL	Q7Z3S9	236 aa		11.18	□□□□□ -0.62
PPP4C-205	ENST00000563200	RBM3	P98179	157 aa	Known RBP	11.16	□□□□□ -0.62
PPP4C-205	ENST00000563200	CRCT1	Q9UGL9	99 aa		11.13	□□□□□ -0.63
PPP4C-205	ENST00000563200	BAALC-AS2	P0C853	105 aa		11.12	□□□□□ -0.63
PPP4C-205	ENST00000563200	FAM240A	A0A1B0GVK7	77 aa		11.11	□□□□□ -0.63
PPP4C-205	ENST00000563200	DSCR8	Q96T75	97 aa		11.11	□□□□□ -0.63
PPP4C-205	ENST00000563200	IGHV6-1	A0A0B4J1U7	121 aa		11.09	□□□□□ -0.63
PPP4C-205	ENST00000563200	ACYP1	P07311	99 aa		11.09	□□□□□ -0.63
PPP4C-205	ENST00000563200		A0A1B0GVX0	72 aa		11.04	□□□□□ -0.64
PPP4C-205	ENST00000563200		Q6ZQT0	140 aa		11.02	□□□□□ -0.64
PPP4C-205	ENST00000563200	C8orf87	E5RJ46	101 aa		11.01	□□□□□ -0.65
PPP4C-205	ENST00000563200		J3KT08	172 aa		10.99	□□□□□ -0.65
PPP4C-205	ENST00000563200	MPLKIP	Q8TAP9	179 aa		10.98	□□□□□ -0.65
PPP4C-205	ENST00000563200	LOC110117498	A0A087WWA1	95 aa		10.97	□□□□□ -0.65
PPP4C-205	ENST00000563200	JMJD7-PLA2G4B	H0Y9G9	81 aa		10.97	□□□□□ -0.65
PPP4C-205	ENST00000563200	HRES1	P13985	223 aa		10.96	□□□□□ -0.65
PPP4C-205	ENST00000563200		A0A1B0GW54	56 aa		10.93	□□□□□ -0.66
PPP4C-205	ENST00000563200	MT-ATP8	P03928	68 aa		10.93	□□□□□ -0.66
PPP4C-205	ENST00000563200	KRTAP9-8	Q9BYQ0	159 aa		10.93	□□□□□ -0.66
PPP4C-205	ENST00000563200	IMUP	Q9GZP8	106 aa		10.93	□□□□□ -0.66
PPP4C-205	ENST00000563200	PDE6G	P18545	87 aa		10.9	□□□□□ -0.66
PPP4C-205	ENST00000563200	C14orf132	Q9NPU4	83 aa		10.88	□□□□□ -0.67
PPP4C-205	ENST00000563200	NDUFB1	O75438	58 aa		10.87	□□□□□ -0.67
PPP4C-205	ENST00000563200		Q8N9P0	234 aa	Predicted RBP	10.87	□□□□□ -0.67
PPP4C-205	ENST00000563200	ZCCHC13	Q8WW36	166 aa	Known RBP	10.87	□□□□□ -0.67
PPP4C-205	ENST00000563200	FAM236D	A0A1B0GTK5	79 aa		10.86	□□□□□ -0.67
PPP4C-205	ENST00000563200	FAM236C	P0DP71	79 aa		10.86	□□□□□ -0.67
PPP4C-205	ENST00000563200	RBM12B-AS1	Q9P1G2	102 aa		10.86	□□□□□ -0.67
PPP4C-205	ENST00000563200		A8MWP4	228 aa		10.85	□□□□□ -0.67
PPP4C-205	ENST00000563200	LINC00643	Q86TS7	51 aa		10.85	□□□□□ -0.67
PPP4C-205	ENST00000563200	IGKV3D-7	A0A0C4DH55	119 aa		10.84	□□□□□ -0.67
PPP4C-205	ENST00000563200	ANAPC13	Q9BS18	74 aa		10.84	□□□□□ -0.67
PPP4C-205	ENST00000563200	C8orf17	Q9NRJ1	99 aa		10.83	□□□□□ -0.68
PPP4C-205	ENST00000563200	SPINK7	P58062	85 aa		10.79	□□□□□ -0.68
PPP4C-205	ENST00000563200	MT2A	P02795	61 aa		10.75	□□□□□ -0.69
PPP4C-205	ENST00000563200	PRR15	Q8IV56	129 aa		10.75	□□□□□ -0.69
PPP4C-205	ENST00000563200	USH2A	O75445	5202 aa		10.75	□□□□□ -0.69
PPP4C-205	ENST00000563200	NREP	Q16612	68 aa		10.75	□□□□□ -0.69
PPP4C-205	ENST00000563200		Q6ZVQ6	151 aa		10.74	□□□□□ -0.69
PPP4C-205	ENST00000563200	SSPO	A2VEC9	5147 aa		10.72	□□□□□ -0.69
PPP4C-205	ENST00000563200	ATP5EP2	Q5VTU8	51 aa		10.7	□□□□□ -0.7
PPP4C-205	ENST00000563200	MMP24-AS1	A0A0U1RRL7	71 aa		10.68	□□□□□ -0.7
PPP4C-205	ENST00000563200	MT1F	P04733	61 aa		10.67	□□□□□ -0.7
PPP4C-205	ENST00000563200	TMEM254	Q8TBM7	123 aa		10.65	□□□□□ -0.7
PPP4C-205	ENST00000563200	MRPL34	Q9BQ48	92 aa	Known RBP	10.64	□□□□□ -0.71
PPP4C-205	ENST00000563200		K7EQZ3	153 aa		10.63	□□□□□ -0.71
PPP4C-205	ENST00000563200	WFDC13	Q8IUB5	93 aa		10.62	□□□□□ -0.71
PPP4C-205	ENST00000563200	ATOX1	O00244	68 aa		10.61	□□□□□ -0.71
PPP4C-205	ENST00000563200	KRTAP9-3	Q9BYQ3	159 aa		10.59	□□□□□ -0.71
PPP4C-205	ENST00000563200	hDV103S1	A0JD37	113 aa		10.58	□□□□□ -0.72
PPP4C-205	ENST00000563200	FAM236A	A0A1B0GUQ0	79 aa		10.58	□□□□□ -0.72
PPP4C-205	ENST00000563200	FAM236B	A0A1B0GV22	79 aa		10.58	□□□□□ -0.72
PPP4C-205	ENST00000563200	KRTAP10-10	P60014	251 aa		10.57	□□□□□ -0.72
PPP4C-205	ENST00000563200	UBL5	Q9BZL1	73 aa		10.57	□□□□□ -0.72
PPP4C-205	ENST00000563200	LCE2B	O14633	110 aa		10.55	□□□□□ -0.72
PPP4C-205	ENST00000563200	UQCRQ	O14949	82 aa		10.55	□□□□□ -0.72
PPP4C-205	ENST00000563200	BPY2	O14599	106 aa		10.54	□□□□□ -0.72
PPP4C-205	ENST00000563200	HIST1H4A	P62805	103 aa	Known RBP	10.53	□□□□□ -0.72
PPP4C-205	ENST00000563200	LINC00846	Q9NV44	126 aa		10.52	□□□□□ -0.73
PPP4C-205	ENST00000563200	NDUFS5	O43920	106 aa		10.5	□□□□□ -0.73
PPP4C-205	ENST00000563200	CCDC179	H3BU77	68 aa		10.47	□□□□□ -0.73
PPP4C-205	ENST00000563200	COX7C	P15954	63 aa		10.47	□□□□□ -0.73
PPP4C-205	ENST00000563200		Q5W150	140 aa		10.47	□□□□□ -0.73
PPP4C-205	ENST00000563200		Q8N9L7	120 aa		10.47	□□□□□ -0.73
PPP4C-205	ENST00000563200	SMIM20	Q8N5G0	67 aa		10.44	□□□□□ -0.74
PPP4C-205	ENST00000563200	CXCL6	P80162	114 aa		10.41	□□□□□ -0.74
PPP4C-205	ENST00000563200	CASC2	Q6XLA1	102 aa		10.41	□□□□□ -0.74
PPP4C-205	ENST00000563200	SERP2	Q8N6R1	65 aa		10.41	□□□□□ -0.74
PPP4C-205	ENST00000563200	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	10.41	□□□□□ -0.74
PPP4C-205	ENST00000563200	H1FX-AS1	Q4G0G2	97 aa		10.41	□□□□□ -0.74
PPP4C-205	ENST00000563200	IGKV2D-30	A0A075B6S6	120 aa		10.39	□□□□□ -0.75
PPP4C-205	ENST00000563200	IGKV2-30	P06310	120 aa		10.39	□□□□□ -0.75
PPP4C-205	ENST00000563200	C7orf65	Q6ZTY9	151 aa		10.38	□□□□□ -0.75
PPP4C-205	ENST00000563200	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	10.37	□□□□□ -0.75
PPP4C-205	ENST00000563200	HCG22	E2RYF7	251 aa		10.36	□□□□□ -0.75
PPP4C-205	ENST00000563200	KRTAP19-1	Q8IUB9	90 aa		10.35	□□□□□ -0.75
PPP4C-205	ENST00000563200	TMEM258	P61165	79 aa		10.29	□□□□□ -0.76
PPP4C-205	ENST00000563200	TRAV7	A0A075B6U4	112 aa		10.25	□□□□□ -0.77
PPP4C-205	ENST00000563200		A0A087WVE0	104 aa		10.24	□□□□□ -0.77
PPP4C-205	ENST00000563200	KRTAP9-7	A8MTY7	169 aa		10.24	□□□□□ -0.77
PPP4C-205	ENST00000563200	RPS28	P62857	69 aa	Known RBP	10.24	□□□□□ -0.77
PPP4C-205	ENST00000563200	C4orf26	Q17RF5	130 aa		10.24	□□□□□ -0.77
PPP4C-205	ENST00000563200	NDUFC1	O43677	76 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms