RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 CEND1Q8N111 149 aa5.7□□□□□ -1.5
NSMCE1-202ENST00000561960 MPLKIPQ8TAP9 179 aa5.7□□□□□ -1.5
NSMCE1-202ENST00000561960 SS18L2Q9UHA2 77 aa5.7□□□□□ -1.5
NSMCE1-202ENST00000561960 TMEM238LA0A1B0GVL6 79 aa5.68□□□□□ -1.5
NSMCE1-202ENST00000561960 FXYD2P54710 66 aa5.68□□□□□ -1.5
NSMCE1-202ENST00000561960 K7ERJ3 54 aa5.67□□□□□ -1.5
NSMCE1-202ENST00000561960 LINC00313P59037 77 aa5.67□□□□□ -1.5
NSMCE1-202ENST00000561960 TEN1Q86WV5 123 aa5.67□□□□□ -1.5
NSMCE1-202ENST00000561960 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
NSMCE1-202ENST00000561960 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
NSMCE1-202ENST00000561960 IGKV4-1P06312 121 aa5.66□□□□□ -1.5
NSMCE1-202ENST00000561960 NDUFV3P56181 108 aaKnown RBP5.66□□□□□ -1.5
NSMCE1-202ENST00000561960 LYRM7Q5U5X0 104 aa5.66□□□□□ -1.5
NSMCE1-202ENST00000561960 FAM218AQ96MZ4 157 aa5.66□□□□□ -1.5
NSMCE1-202ENST00000561960 A6NJY4 79 aa5.65□□□□□ -1.5
NSMCE1-202ENST00000561960 HIST1H4GQ99525 98 aa5.65□□□□□ -1.5
NSMCE1-202ENST00000561960 KRTAP6-3Q3LI67 103 aa5.64□□□□□ -1.51
NSMCE1-202ENST00000561960 LINC00846Q9NV44 126 aa5.64□□□□□ -1.51
NSMCE1-202ENST00000561960 IGHV6-1A0A0B4J1U7 121 aa5.63□□□□□ -1.51
NSMCE1-202ENST00000561960 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
NSMCE1-202ENST00000561960 H3BMG7 143 aa5.62□□□□□ -1.51
NSMCE1-202ENST00000561960 ETDBQ3ZM63 59 aa5.62□□□□□ -1.51
NSMCE1-202ENST00000561960 PPDPFLQ8WWR9 84 aa5.62□□□□□ -1.51
NSMCE1-202ENST00000561960 PRO0461Q9UI25 63 aa5.62□□□□□ -1.51
NSMCE1-202ENST00000561960 NEBP20929 6669 aa5.59□□□□□ -1.51
NSMCE1-202ENST00000561960 PSMB2P49721 201 aa5.57□□□□□ -1.52
NSMCE1-202ENST00000561960 ANAPC13Q9BS18 74 aa5.56□□□□□ -1.52
NSMCE1-202ENST00000561960 SPINK7P58062 85 aa5.55□□□□□ -1.52
NSMCE1-202ENST00000561960 MT-ATP8P03928 68 aa5.54□□□□□ -1.52
NSMCE1-202ENST00000561960 SMCPP49901 116 aaPredicted RBP5.54□□□□□ -1.52
NSMCE1-202ENST00000561960 WFDC13Q8IUB5 93 aa5.54□□□□□ -1.52
NSMCE1-202ENST00000561960 A8MWP4 228 aa5.52□□□□□ -1.53
NSMCE1-202ENST00000561960 SCGB1C2P0DMR2 95 aa5.52□□□□□ -1.53
NSMCE1-202ENST00000561960 ANKRD29Q8N6D5 301 aa5.52□□□□□ -1.53
NSMCE1-202ENST00000561960 ZCCHC13Q8WW36 166 aaKnown RBP5.52□□□□□ -1.53
NSMCE1-202ENST00000561960 LINC00472Q9H8W2 130 aa5.52□□□□□ -1.53
NSMCE1-202ENST00000561960 A0A0B4J2C4 111 aa5.51□□□□□ -1.53
NSMCE1-202ENST00000561960 SNCGO76070 127 aa5.51□□□□□ -1.53
NSMCE1-202ENST00000561960 PRO1854Q9UHT4 67 aa5.51□□□□□ -1.53
NSMCE1-202ENST00000561960 H0YGX0 51 aa5.49□□□□□ -1.53
NSMCE1-202ENST00000561960 ATXN8Q156A1 80 aa5.49□□□□□ -1.53
NSMCE1-202ENST00000561960 TRBV7-4A0A0J9YYF1 115 aa5.48□□□□□ -1.53
NSMCE1-202ENST00000561960 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
NSMCE1-202ENST00000561960 TRACP01848 142 aa5.48□□□□□ -1.53
NSMCE1-202ENST00000561960 CCKP06307 115 aa5.48□□□□□ -1.53
NSMCE1-202ENST00000561960 C9JAW5 83 aa5.47□□□□□ -1.53
NSMCE1-202ENST00000561960 TRIAP1O43715 76 aa5.47□□□□□ -1.53
NSMCE1-202ENST00000561960 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
NSMCE1-202ENST00000561960 KRTAP20-1Q3LI63 56 aa5.46□□□□□ -1.54
NSMCE1-202ENST00000561960 C8orf87E5RJ46 101 aa5.43□□□□□ -1.54
NSMCE1-202ENST00000561960 H3BT86 120 aa5.43□□□□□ -1.54
NSMCE1-202ENST00000561960 COX6CP09669 75 aa5.43□□□□□ -1.54
NSMCE1-202ENST00000561960 FAM240AA0A1B0GVK7 77 aa5.42□□□□□ -1.54
NSMCE1-202ENST00000561960 ORMDL1Q9P0S3 153 aa5.42□□□□□ -1.54
NSMCE1-202ENST00000561960 DNAL4O96015 105 aa5.41□□□□□ -1.54
NSMCE1-202ENST00000561960 CCDC179H3BU77 68 aa5.4□□□□□ -1.54
NSMCE1-202ENST00000561960 A0A1B0GX51 115 aa5.39□□□□□ -1.55
NSMCE1-202ENST00000561960 A6NN06 94 aa5.39□□□□□ -1.55
NSMCE1-202ENST00000561960 ACYP1P07311 99 aa5.39□□□□□ -1.55
NSMCE1-202ENST00000561960 KMT2DO14686 5537 aa5.38□□□□□ -1.55
NSMCE1-202ENST00000561960 GHRHP01286 108 aa5.37□□□□□ -1.55
NSMCE1-202ENST00000561960 SMIM20Q8N5G0 67 aa5.37□□□□□ -1.55
NSMCE1-202ENST00000561960 IMUPQ9GZP8 106 aa5.37□□□□□ -1.55
NSMCE1-202ENST00000561960 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
NSMCE1-202ENST00000561960 C8orf17Q9NRJ1 99 aa5.35□□□□□ -1.55
NSMCE1-202ENST00000561960 TMEM256-PLSCR3K7ERE1 68 aa5.34□□□□□ -1.55
NSMCE1-202ENST00000561960 RBM3P98179 157 aaKnown RBP5.34□□□□□ -1.55
NSMCE1-202ENST00000561960 IGKV3D-7A0A0C4DH55 119 aa5.33□□□□□ -1.56
NSMCE1-202ENST00000561960 MT1BP07438 61 aa5.33□□□□□ -1.56
NSMCE1-202ENST00000561960 LINC00643Q86TS7 51 aa5.32□□□□□ -1.56
NSMCE1-202ENST00000561960 FAM236AA0A1B0GUQ0 79 aa5.31□□□□□ -1.56
NSMCE1-202ENST00000561960 FAM236BA0A1B0GV22 79 aa5.31□□□□□ -1.56
NSMCE1-202ENST00000561960 IGKV2D-30A0A075B6S6 120 aa5.3□□□□□ -1.56
NSMCE1-202ENST00000561960 UQCRQO14949 82 aa5.3□□□□□ -1.56
NSMCE1-202ENST00000561960 NDUFB1O75438 58 aa5.3□□□□□ -1.56
NSMCE1-202ENST00000561960 IGKV2-30P06310 120 aa5.3□□□□□ -1.56
NSMCE1-202ENST00000561960 Q6ZVQ6 151 aa5.3□□□□□ -1.56
NSMCE1-202ENST00000561960 DSCR8Q96T75 97 aa5.3□□□□□ -1.56
NSMCE1-202ENST00000561960 H3BQ85 93 aa5.29□□□□□ -1.56
NSMCE1-202ENST00000561960 J3KT08 172 aa5.29□□□□□ -1.56
NSMCE1-202ENST00000561960 C5orf47Q569G3 176 aa5.29□□□□□ -1.56
NSMCE1-202ENST00000561960 Q6ZQT0 140 aa5.29□□□□□ -1.56
NSMCE1-202ENST00000561960 NDUFS5O43920 106 aa5.28□□□□□ -1.56
NSMCE1-202ENST00000561960 ATOX1O00244 68 aa5.27□□□□□ -1.57
NSMCE1-202ENST00000561960 Q5VV11 94 aa5.27□□□□□ -1.57
NSMCE1-202ENST00000561960 COX7CP15954 63 aa5.26□□□□□ -1.57
NSMCE1-202ENST00000561960 BAALC-AS2P0C853 105 aa5.25□□□□□ -1.57
NSMCE1-202ENST00000561960 MMP24-AS1A0A0U1RRL7 71 aa5.24□□□□□ -1.57
NSMCE1-202ENST00000561960 RPS28P62857 69 aaKnown RBP5.24□□□□□ -1.57
NSMCE1-202ENST00000561960 C4orf26Q17RF5 130 aa5.24□□□□□ -1.57
NSMCE1-202ENST00000561960 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
NSMCE1-202ENST00000561960 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
NSMCE1-202ENST00000561960 HIST1H4AP62805 103 aaKnown RBP5.22□□□□□ -1.57
NSMCE1-202ENST00000561960 Q5W150 140 aa5.22□□□□□ -1.57
NSMCE1-202ENST00000561960 MRPL34Q9BQ48 92 aaKnown RBP5.22□□□□□ -1.57
NSMCE1-202ENST00000561960 TMEM258P61165 79 aa5.21□□□□□ -1.58
NSMCE1-202ENST00000561960 PRR15Q8IV56 129 aa5.2□□□□□ -1.58
NSMCE1-202ENST00000561960 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
NSMCE1-202ENST00000561960 SERP2Q8N6R1 65 aa5.19□□□□□ -1.58
NSMCE1-202ENST00000561960 TMEM254Q8TBM7 123 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms