RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 DSCR10P59022 87 aa7.28□□□□□ -1.24
SPG7-205ENST00000561945 DSCR8Q96T75 97 aa7.28□□□□□ -1.24
SPG7-205ENST00000561945 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.25
SPG7-205ENST00000561945 C9orf118A6NHY6 69 aa7.26□□□□□ -1.25
SPG7-205ENST00000561945 LCE2BO14633 110 aa7.26□□□□□ -1.25
SPG7-205ENST00000561945 MT1FP04733 61 aa7.26□□□□□ -1.25
SPG7-205ENST00000561945 CCKP06307 115 aa7.26□□□□□ -1.25
SPG7-205ENST00000561945 HRES1P13985 223 aa7.25□□□□□ -1.25
SPG7-205ENST00000561945 KRTAP9-3Q9BYQ3 159 aa7.25□□□□□ -1.25
SPG7-205ENST00000561945 C9JAW5 83 aa7.24□□□□□ -1.25
SPG7-205ENST00000561945 JMJD7-PLA2G4BH0Y9G9 81 aa7.24□□□□□ -1.25
SPG7-205ENST00000561945 LINC00313P59037 77 aa7.24□□□□□ -1.25
SPG7-205ENST00000561945 TAX1BP3O14907 124 aa7.23□□□□□ -1.25
SPG7-205ENST00000561945 C21orf62-AS1Q17RA5 79 aa7.23□□□□□ -1.25
SPG7-205ENST00000561945 VPS25Q9BRG1 176 aa7.23□□□□□ -1.25
SPG7-205ENST00000561945 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
SPG7-205ENST00000561945 A0A1W2PPM0 123 aa7.21□□□□□ -1.26
SPG7-205ENST00000561945 SIGMAR1Q99720 223 aa7.21□□□□□ -1.26
SPG7-205ENST00000561945 PDE6GP18545 87 aa7.2□□□□□ -1.26
SPG7-205ENST00000561945 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
SPG7-205ENST00000561945 LINC00472Q9H8W2 130 aa7.2□□□□□ -1.26
SPG7-205ENST00000561945 RBM12B-AS1Q9P1G2 102 aa7.2□□□□□ -1.26
SPG7-205ENST00000561945 FAM236DA0A1B0GTK5 79 aa7.19□□□□□ -1.26
SPG7-205ENST00000561945 IGKV4-1P06312 121 aa7.19□□□□□ -1.26
SPG7-205ENST00000561945 FAM236CP0DP71 79 aa7.19□□□□□ -1.26
SPG7-205ENST00000561945 COL5A1-AS1Q5SY13 56 aa7.18□□□□□ -1.26
SPG7-205ENST00000561945 A0A1B0GW54 56 aa7.16□□□□□ -1.26
SPG7-205ENST00000561945 H3BT86 120 aa7.16□□□□□ -1.26
SPG7-205ENST00000561945 LOC110117498A0A087WWA1 95 aa7.15□□□□□ -1.26
SPG7-205ENST00000561945 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
SPG7-205ENST00000561945 Q6ZQT0 140 aa7.14□□□□□ -1.27
SPG7-205ENST00000561945 SPCS1Q9Y6A9 102 aa7.14□□□□□ -1.27
SPG7-205ENST00000561945 DEFB116Q30KQ4 102 aa7.12□□□□□ -1.27
SPG7-205ENST00000561945 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
SPG7-205ENST00000561945 J3KT08 172 aa7.11□□□□□ -1.27
SPG7-205ENST00000561945 PCP4L1A6NKN8 68 aa7.1□□□□□ -1.27
SPG7-205ENST00000561945 C8orf87E5RJ46 101 aa7.1□□□□□ -1.27
SPG7-205ENST00000561945 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.27
SPG7-205ENST00000561945 A0A1B0GVX0 72 aa7.08□□□□□ -1.28
SPG7-205ENST00000561945 MTURNQ8N3F0 131 aa7.08□□□□□ -1.28
SPG7-205ENST00000561945 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
SPG7-205ENST00000561945 NDUFB1O75438 58 aa7.06□□□□□ -1.28
SPG7-205ENST00000561945 ZCCHC13Q8WW36 166 aaKnown RBP7.06□□□□□ -1.28
SPG7-205ENST00000561945 NREPQ16612 68 aa7.05□□□□□ -1.28
SPG7-205ENST00000561945 K7EP34 96 aa7.04□□□□□ -1.28
SPG7-205ENST00000561945 SPINK7P58062 85 aa7.03□□□□□ -1.28
SPG7-205ENST00000561945 GTF2H5Q6ZYL4 71 aa7.03□□□□□ -1.28
SPG7-205ENST00000561945 Q8N9P0 234 aaPredicted RBP7.02□□□□□ -1.29
SPG7-205ENST00000561945 LINC00846Q9NV44 126 aa7.01□□□□□ -1.29
SPG7-205ENST00000561945 A8MWP4 228 aa6.99□□□□□ -1.29
SPG7-205ENST00000561945 SMCPP49901 116 aaPredicted RBP6.99□□□□□ -1.29
SPG7-205ENST00000561945 PRO0461Q9UI25 63 aa6.97□□□□□ -1.29
SPG7-205ENST00000561945 F8W1H4 67 aa6.95□□□□□ -1.3
SPG7-205ENST00000561945 IGKV3D-7A0A0C4DH55 119 aa6.94□□□□□ -1.3
SPG7-205ENST00000561945 PRR15Q8IV56 129 aa6.94□□□□□ -1.3
SPG7-205ENST00000561945 C8orf17Q9NRJ1 99 aa6.94□□□□□ -1.3
SPG7-205ENST00000561945 BPY2O14599 106 aa6.92□□□□□ -1.3
SPG7-205ENST00000561945 WFDC13Q8IUB5 93 aa6.92□□□□□ -1.3
SPG7-205ENST00000561945 Q6ZVQ6 151 aa6.9□□□□□ -1.3
SPG7-205ENST00000561945 UBL5Q9BZL1 73 aa6.89□□□□□ -1.31
SPG7-205ENST00000561945 KRTAP6-3Q3LI67 103 aa6.88□□□□□ -1.31
SPG7-205ENST00000561945 NEBP20929 6669 aa6.88□□□□□ -1.31
SPG7-205ENST00000561945 ETDBQ3ZM63 59 aa6.86□□□□□ -1.31
SPG7-205ENST00000561945 K7EQZ3 153 aa6.85□□□□□ -1.31
SPG7-205ENST00000561945 TMEM254Q8TBM7 123 aa6.85□□□□□ -1.31
SPG7-205ENST00000561945 MMP24-AS1A0A0U1RRL7 71 aa6.84□□□□□ -1.31
SPG7-205ENST00000561945 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
SPG7-205ENST00000561945 MRPL34Q9BQ48 92 aaKnown RBP6.84□□□□□ -1.31
SPG7-205ENST00000561945 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
SPG7-205ENST00000561945 H1FX-AS1Q4G0G2 97 aa6.82□□□□□ -1.32
SPG7-205ENST00000561945 NDUFS5O43920 106 aa6.8□□□□□ -1.32
SPG7-205ENST00000561945 Q8N9L7 120 aa6.78□□□□□ -1.32
SPG7-205ENST00000561945 CASC2Q6XLA1 102 aa6.77□□□□□ -1.33
SPG7-205ENST00000561945 ACYP1P07311 99 aa6.75□□□□□ -1.33
SPG7-205ENST00000561945 CXCL6P80162 114 aa6.73□□□□□ -1.33
SPG7-205ENST00000561945 HCG22E2RYF7 251 aa6.72□□□□□ -1.33
SPG7-205ENST00000561945 A0A1B0GV90 55 aa6.7□□□□□ -1.34
SPG7-205ENST00000561945 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
SPG7-205ENST00000561945 Q5W150 140 aa6.67□□□□□ -1.34
SPG7-205ENST00000561945 C7orf65Q6ZTY9 151 aa6.67□□□□□ -1.34
SPG7-205ENST00000561945 IGKV2D-30A0A075B6S6 120 aa6.63□□□□□ -1.35
SPG7-205ENST00000561945 IGKV2-30P06310 120 aa6.63□□□□□ -1.35
SPG7-205ENST00000561945 ATP5EP2Q5VTU8 51 aa6.63□□□□□ -1.35
SPG7-205ENST00000561945 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
SPG7-205ENST00000561945 MT1BP07438 61 aa6.61□□□□□ -1.35
SPG7-205ENST00000561945 KRTAP19-8Q3LI54 63 aa6.59□□□□□ -1.35
SPG7-205ENST00000561945 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
SPG7-205ENST00000561945 J3QR89 54 aa6.58□□□□□ -1.36
SPG7-205ENST00000561945 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
SPG7-205ENST00000561945 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
SPG7-205ENST00000561945 A6NN06 94 aa6.57□□□□□ -1.36
SPG7-205ENST00000561945 HIST1H4AP62805 103 aaKnown RBP6.57□□□□□ -1.36
SPG7-205ENST00000561945 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
SPG7-205ENST00000561945 Q5VV11 94 aa6.54□□□□□ -1.36
SPG7-205ENST00000561945 KMT2DO14686 5537 aa6.54□□□□□ -1.36
SPG7-205ENST00000561945 MDN1Q9NU22 5596 aa6.53□□□□□ -1.36
SPG7-205ENST00000561945 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
SPG7-205ENST00000561945 C5orf47Q569G3 176 aa6.52□□□□□ -1.37
SPG7-205ENST00000561945 FAM236AA0A1B0GUQ0 79 aa6.5□□□□□ -1.37
SPG7-205ENST00000561945 FAM236BA0A1B0GV22 79 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms