RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PKHD1L1Q86WI1 4243 aa3.94□□□□□ -1.78
CAPN3-210ENST00000561817 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
CAPN3-210ENST00000561817 C1orf137Q5JT78 98 aa3.93□□□□□ -1.78
CAPN3-210ENST00000561817 Q6JHZ5 121 aa3.93□□□□□ -1.78
CAPN3-210ENST00000561817 OCR1Q9BZK8 76 aa3.93□□□□□ -1.78
CAPN3-210ENST00000561817 FAT1Q14517 4588 aa3.93□□□□□ -1.78
CAPN3-210ENST00000561817 IGFL1Q6UW32 110 aa3.92□□□□□ -1.78
CAPN3-210ENST00000561817 Q8NBF4 154 aa3.92□□□□□ -1.78
CAPN3-210ENST00000561817 IMUPQ9GZP8 106 aa3.92□□□□□ -1.78
CAPN3-210ENST00000561817 A0A0G2JQZ4 141 aa3.91□□□□□ -1.78
CAPN3-210ENST00000561817 A0A1B0GW54 56 aa3.91□□□□□ -1.78
CAPN3-210ENST00000561817 SMR3BP02814 79 aaPredicted RBP3.91□□□□□ -1.78
CAPN3-210ENST00000561817 LINC00313P59037 77 aa3.91□□□□□ -1.78
CAPN3-210ENST00000561817 PRR15Q8IV56 129 aa3.91□□□□□ -1.78
CAPN3-210ENST00000561817 KIAA1109Q2LD37 5005 aa3.91□□□□□ -1.78
CAPN3-210ENST00000561817 CRYGAP11844 174 aa3.9□□□□□ -1.79
CAPN3-210ENST00000561817 RYR1P21817 5038 aa3.9□□□□□ -1.79
CAPN3-210ENST00000561817 IGKV3D-7A0A0C4DH55 119 aa3.89□□□□□ -1.79
CAPN3-210ENST00000561817 A8MUN3 132 aa3.89□□□□□ -1.79
CAPN3-210ENST00000561817 F8WEM9 126 aa3.89□□□□□ -1.79
CAPN3-210ENST00000561817 PRR4Q16378 134 aa3.89□□□□□ -1.79
CAPN3-210ENST00000561817 ATP5EP2Q5VTU8 51 aa3.89□□□□□ -1.79
CAPN3-210ENST00000561817 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
CAPN3-210ENST00000561817 UBL5Q9BZL1 73 aa3.89□□□□□ -1.79
CAPN3-210ENST00000561817 ZNF706Q9Y5V0 76 aaPredicted RBP3.89□□□□□ -1.79
CAPN3-210ENST00000561817 HIST1H4AP62805 103 aaKnown RBP3.88□□□□□ -1.79
CAPN3-210ENST00000561817 ANAPC11Q9NYG5 84 aa3.88□□□□□ -1.79
CAPN3-210ENST00000561817 HSPG2P98160 4391 aa3.88□□□□□ -1.79
CAPN3-210ENST00000561817 KRTAP10-4P60372 401 aaPredicted RBP3.87□□□□□ -1.79
CAPN3-210ENST00000561817 RPL37AP61513 92 aaKnown RBP3.87□□□□□ -1.79
CAPN3-210ENST00000561817 CXCL6P80162 114 aa3.87□□□□□ -1.79
CAPN3-210ENST00000561817 KRTAP1-4P0C5Y4 121 aa3.86□□□□□ -1.79
CAPN3-210ENST00000561817 Q5VSD8 79 aa3.86□□□□□ -1.79
CAPN3-210ENST00000561817 HERC2O95714 4834 aa3.86□□□□□ -1.79
CAPN3-210ENST00000561817 A0A087WVE0 104 aa3.85□□□□□ -1.79
CAPN3-210ENST00000561817 NREPQ16612 68 aa3.85□□□□□ -1.79
CAPN3-210ENST00000561817 A0A087WSZ3 146 aa3.84□□□□□ -1.79
CAPN3-210ENST00000561817 KRTAP13-2Q52LG2 175 aa3.84□□□□□ -1.79
CAPN3-210ENST00000561817 A0A087X002 238 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 FAM236AA0A1B0GUQ0 79 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 FAM236BA0A1B0GV22 79 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 CCDC179H3BU77 68 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 IGKV4-1P06312 121 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 DSCR10P59022 87 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 MOBPQ13875 183 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 FAM229BQ4G0N7 80 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 LCA10Q71F78 164 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
CAPN3-210ENST00000561817 BPY2O14599 106 aa3.82□□□□□ -1.8
CAPN3-210ENST00000561817 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
CAPN3-210ENST00000561817 Q96NJ1 140 aa3.82□□□□□ -1.8
CAPN3-210ENST00000561817 SSBP3-AS1Q7Z2R9 100 aa3.81□□□□□ -1.8
CAPN3-210ENST00000561817 Q8N9L7 120 aa3.81□□□□□ -1.8
CAPN3-210ENST00000561817 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
CAPN3-210ENST00000561817 SPINK6Q6UWN8 80 aa3.8□□□□□ -1.8
CAPN3-210ENST00000561817 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
CAPN3-210ENST00000561817 FAT3Q8TDW7 4589 aa3.79□□□□□ -1.8
CAPN3-210ENST00000561817 TNXBP22105 4242 aa3.78□□□□□ -1.8
CAPN3-210ENST00000561817 KRTAP16-1A8MUX0 517 aa3.78□□□□□ -1.8
CAPN3-210ENST00000561817 K7EQZ3 153 aa3.78□□□□□ -1.8
CAPN3-210ENST00000561817 DEFB116Q30KQ4 102 aa3.78□□□□□ -1.8
CAPN3-210ENST00000561817 KRTAP29-1A8MX34 341 aaPredicted RBP3.77□□□□□ -1.81
CAPN3-210ENST00000561817 ATOX1O00244 68 aa3.77□□□□□ -1.81
CAPN3-210ENST00000561817 TMEM258P61165 79 aa3.77□□□□□ -1.81
CAPN3-210ENST00000561817 ASB16-AS1Q495Z4 193 aa3.77□□□□□ -1.81
CAPN3-210ENST00000561817 A8MWP4 228 aa3.76□□□□□ -1.81
CAPN3-210ENST00000561817 LRP1Q07954 4544 aaKnown RBP3.76□□□□□ -1.81
CAPN3-210ENST00000561817 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
CAPN3-210ENST00000561817 COX7CP15954 63 aa3.74□□□□□ -1.81
CAPN3-210ENST00000561817 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
CAPN3-210ENST00000561817 TRAV7A0A075B6U4 112 aa3.73□□□□□ -1.81
CAPN3-210ENST00000561817 MMP24-AS1A0A0U1RRL7 71 aa3.73□□□□□ -1.81
CAPN3-210ENST00000561817 HCG22E2RYF7 251 aa3.73□□□□□ -1.81
CAPN3-210ENST00000561817 LINC01554Q52M75 96 aa3.73□□□□□ -1.81
CAPN3-210ENST00000561817 TYMSOSQ8TAI1 123 aa3.73□□□□□ -1.81
CAPN3-210ENST00000561817 UQCRQO14949 82 aa3.72□□□□□ -1.81
CAPN3-210ENST00000561817 FLG2Q5D862 2391 aaPredicted RBP3.71□□□□□ -1.81
CAPN3-210ENST00000561817 A0A1B0GVX0 72 aa3.71□□□□□ -1.82
CAPN3-210ENST00000561817 RPS29P62273 56 aaKnown RBP3.71□□□□□ -1.82
CAPN3-210ENST00000561817 SPINK1P00995 79 aa3.7□□□□□ -1.82
CAPN3-210ENST00000561817 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
CAPN3-210ENST00000561817 CYSTM1Q9H1C7 97 aa3.7□□□□□ -1.82
CAPN3-210ENST00000561817 C8orf17Q9NRJ1 99 aa3.7□□□□□ -1.82
CAPN3-210ENST00000561817 KRTAP10-8P60410 259 aa3.69□□□□□ -1.82
CAPN3-210ENST00000561817 WFDC13Q8IUB5 93 aa3.69□□□□□ -1.82
CAPN3-210ENST00000561817 LINC00304Q8N9R0 145 aa3.69□□□□□ -1.82
CAPN3-210ENST00000561817 NDUFB1O75438 58 aa3.68□□□□□ -1.82
CAPN3-210ENST00000561817 SPAG11AQ6PDA7 123 aa3.68□□□□□ -1.82
CAPN3-210ENST00000561817 CASC2Q6XLA1 102 aa3.68□□□□□ -1.82
CAPN3-210ENST00000561817 LIMD2Q9BT23 127 aa3.68□□□□□ -1.82
CAPN3-210ENST00000561817 MYCBP2O75592 4640 aa3.68□□□□□ -1.82
CAPN3-210ENST00000561817 hDV103S1A0JD37 113 aa3.67□□□□□ -1.82
CAPN3-210ENST00000561817 KLKP1Q107X0 134 aa3.66□□□□□ -1.82
CAPN3-210ENST00000561817 C7orf65Q6ZTY9 151 aa3.66□□□□□ -1.82
CAPN3-210ENST00000561817 TMEM254Q8TBM7 123 aa3.66□□□□□ -1.82
CAPN3-210ENST00000561817 LUZP6Q538Z0 58 aa3.65□□□□□ -1.83
CAPN3-210ENST00000561817 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
CAPN3-210ENST00000561817 C20orf197Q8N268 126 aa3.65□□□□□ -1.83
CAPN3-210ENST00000561817 ZCCHC13Q8WW36 166 aaKnown RBP3.65□□□□□ -1.83
CAPN3-210ENST00000561817 SERP1Q9Y6X1 66 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms