RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 NOTCH2NLQ7Z3S9 236 aa12.43□□□□□ -0.42
SMPD3-202ENST00000561749 PRO0461Q9UI25 63 aa12.42□□□□□ -0.42
SMPD3-202ENST00000561749 J3KT08 172 aa12.39□□□□□ -0.43
SMPD3-202ENST00000561749 C20orf166-AS1Q96NR2 134 aa12.39□□□□□ -0.43
SMPD3-202ENST00000561749 A0A1B0GVX0 72 aa12.38□□□□□ -0.43
SMPD3-202ENST00000561749 ATP11AUNQ6ZP68 121 aa12.38□□□□□ -0.43
SMPD3-202ENST00000561749 A8MUU9 505 aa12.37□□□□□ -0.43
SMPD3-202ENST00000561749 KRTAP16-1A8MUX0 517 aa12.36□□□□□ -0.43
SMPD3-202ENST00000561749 GTF2H5Q6ZYL4 71 aa12.36□□□□□ -0.43
SMPD3-202ENST00000561749 NREPQ16612 68 aa12.35□□□□□ -0.43
SMPD3-202ENST00000561749 FAT4Q6V0I7 4981 aa12.35□□□□□ -0.43
SMPD3-202ENST00000561749 C8orf87E5RJ46 101 aa12.31□□□□□ -0.44
SMPD3-202ENST00000561749 NDUFB1O75438 58 aa12.3□□□□□ -0.44
SMPD3-202ENST00000561749 A8MWP4 228 aa12.28□□□□□ -0.44
SMPD3-202ENST00000561749 IGKV3D-7A0A0C4DH55 119 aa12.26□□□□□ -0.45
SMPD3-202ENST00000561749 LCE2AQ5TA79 106 aaPredicted RBP12.24□□□□□ -0.45
SMPD3-202ENST00000561749 F8W1H4 67 aa12.22□□□□□ -0.45
SMPD3-202ENST00000561749 C8orf17Q9NRJ1 99 aa12.22□□□□□ -0.45
SMPD3-202ENST00000561749 KRTAP19-2Q3LHN2 52 aa12.21□□□□□ -0.45
SMPD3-202ENST00000561749 Q6ZVQ6 151 aa12.19□□□□□ -0.46
SMPD3-202ENST00000561749 ETDBQ3ZM63 59 aa12.18□□□□□ -0.46
SMPD3-202ENST00000561749 LCE2CQ5TA81 110 aa12.18□□□□□ -0.46
SMPD3-202ENST00000561749 PRR15Q8IV56 129 aa12.18□□□□□ -0.46
SMPD3-202ENST00000561749 BPY2O14599 106 aa12.16□□□□□ -0.46
SMPD3-202ENST00000561749 K7EQZ3 153 aa12.15□□□□□ -0.46
SMPD3-202ENST00000561749 LINC00846Q9NV44 126 aa12.14□□□□□ -0.47
SMPD3-202ENST00000561749 MMP24-AS1A0A0U1RRL7 71 aa12.1□□□□□ -0.47
SMPD3-202ENST00000561749 COX6B2Q6YFQ2 88 aa12.08□□□□□ -0.48
SMPD3-202ENST00000561749 Q8N9P0 234 aaPredicted RBP12.08□□□□□ -0.48
SMPD3-202ENST00000561749 UBL5Q9BZL1 73 aa12.08□□□□□ -0.48
SMPD3-202ENST00000561749 Q8N9L7 120 aa12.07□□□□□ -0.48
SMPD3-202ENST00000561749 ZCCHC13Q8WW36 166 aaKnown RBP12.05□□□□□ -0.48
SMPD3-202ENST00000561749 TMEM254Q8TBM7 123 aa12.03□□□□□ -0.48
SMPD3-202ENST00000561749 A0A1B0GV90 55 aa12.02□□□□□ -0.49
SMPD3-202ENST00000561749 MRPL34Q9BQ48 92 aaKnown RBP12.02□□□□□ -0.49
SMPD3-202ENST00000561749 hDV103S1A0JD37 113 aa12.01□□□□□ -0.49
SMPD3-202ENST00000561749 MT1HP80294 61 aa12.01□□□□□ -0.49
SMPD3-202ENST00000561749 WFDC13Q8IUB5 93 aa11.98□□□□□ -0.49
SMPD3-202ENST00000561749 NDUFS5O43920 106 aa11.95□□□□□ -0.5
SMPD3-202ENST00000561749 CASC2Q6XLA1 102 aa11.92□□□□□ -0.5
SMPD3-202ENST00000561749 HRES1P13985 223 aa11.9□□□□□ -0.5
SMPD3-202ENST00000561749 SPINK7P58062 85 aa11.87□□□□□ -0.51
SMPD3-202ENST00000561749 M0R2T5 61 aa11.84□□□□□ -0.51
SMPD3-202ENST00000561749 FAM236DA0A1B0GTK5 79 aa11.83□□□□□ -0.52
SMPD3-202ENST00000561749 HCG22E2RYF7 251 aa11.83□□□□□ -0.52
SMPD3-202ENST00000561749 FAM236CP0DP71 79 aa11.83□□□□□ -0.52
SMPD3-202ENST00000561749 ACYP1P07311 99 aa11.82□□□□□ -0.52
SMPD3-202ENST00000561749 CXCL6P80162 114 aa11.82□□□□□ -0.52
SMPD3-202ENST00000561749 MPLKIPQ8TAP9 179 aa11.81□□□□□ -0.52
SMPD3-202ENST00000561749 RBM12B-AS1Q9P1G2 102 aa11.81□□□□□ -0.52
SMPD3-202ENST00000561749 FAM240AA0A1B0GVK7 77 aa11.78□□□□□ -0.52
SMPD3-202ENST00000561749 Q5W150 140 aa11.77□□□□□ -0.53
SMPD3-202ENST00000561749 FLGP20930 4061 aaPredicted RBP11.76□□□□□ -0.53
SMPD3-202ENST00000561749 KRTAP10-6P60371 365 aaPredicted RBP11.72□□□□□ -0.53
SMPD3-202ENST00000561749 IGKV2D-30A0A075B6S6 120 aa11.69□□□□□ -0.54
SMPD3-202ENST00000561749 IGKV2-30P06310 120 aa11.69□□□□□ -0.54
SMPD3-202ENST00000561749 LORP23490 312 aaPredicted RBP11.68□□□□□ -0.54
SMPD3-202ENST00000561749 ATP5EP2Q5VTU8 51 aa11.65□□□□□ -0.54
SMPD3-202ENST00000561749 KRTAP9-2Q9BYQ4 174 aa11.64□□□□□ -0.55
SMPD3-202ENST00000561749 C7orf65Q6ZTY9 151 aa11.62□□□□□ -0.55
SMPD3-202ENST00000561749 HIST1H4AP62805 103 aaKnown RBP11.61□□□□□ -0.55
SMPD3-202ENST00000561749 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
SMPD3-202ENST00000561749 TP53AIP1Q9HCN2 124 aa11.55□□□□□ -0.56
SMPD3-202ENST00000561749 J3QR89 54 aa11.51□□□□□ -0.57
SMPD3-202ENST00000561749 A0A087WVE0 104 aa11.5□□□□□ -0.57
SMPD3-202ENST00000561749 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
SMPD3-202ENST00000561749 C4orf26Q17RF5 130 aa11.44□□□□□ -0.58
SMPD3-202ENST00000561749 KRTAP9-8Q9BYQ0 159 aa11.41□□□□□ -0.58
SMPD3-202ENST00000561749 H1FX-AS1Q4G0G2 97 aa11.4□□□□□ -0.58
SMPD3-202ENST00000561749 TRAV22A0A0B4J277 110 aa11.37□□□□□ -0.59
SMPD3-202ENST00000561749 UQCRQO14949 82 aa11.32□□□□□ -0.6
SMPD3-202ENST00000561749 MT2AP02795 61 aa11.31□□□□□ -0.6
SMPD3-202ENST00000561749 CYP4F30PQ9H0H9 118 aa11.29□□□□□ -0.6
SMPD3-202ENST00000561749 H0Y9P7 68 aa11.28□□□□□ -0.6
SMPD3-202ENST00000561749 LOC101927531A0A1B0GV80 90 aa11.26□□□□□ -0.61
SMPD3-202ENST00000561749 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
SMPD3-202ENST00000561749 KRTAP3-1Q9BYR8 98 aa11.26□□□□□ -0.61
SMPD3-202ENST00000561749 K7ERU9 68 aa11.24□□□□□ -0.61
SMPD3-202ENST00000561749 MT1FP04733 61 aa11.23□□□□□ -0.61
SMPD3-202ENST00000561749 ATOX1O00244 68 aa11.2□□□□□ -0.62
SMPD3-202ENST00000561749 OCR1Q9BZK8 76 aa11.2□□□□□ -0.62
SMPD3-202ENST00000561749 KRTAP10-10P60014 251 aa11.18□□□□□ -0.62
SMPD3-202ENST00000561749 MT-ATP8P03928 68 aa11.16□□□□□ -0.62
SMPD3-202ENST00000561749 LINC00208Q96KT6 92 aa11.14□□□□□ -0.63
SMPD3-202ENST00000561749 KRTAP9-6A0A140TA67 174 aa11.13□□□□□ -0.63
SMPD3-202ENST00000561749 SCGB1A1P11684 91 aa11.11□□□□□ -0.63
SMPD3-202ENST00000561749 S4R3F8 94 aa11.11□□□□□ -0.63
SMPD3-202ENST00000561749 MP68P56378 58 aa11.09□□□□□ -0.63
SMPD3-202ENST00000561749 C5orf47Q569G3 176 aa11.09□□□□□ -0.63
SMPD3-202ENST00000561749 IMUPQ9GZP8 106 aa11.07□□□□□ -0.64
SMPD3-202ENST00000561749 CRCT1Q9UGL9 99 aa11.05□□□□□ -0.64
SMPD3-202ENST00000561749 KLKP1Q107X0 134 aa11.04□□□□□ -0.64
SMPD3-202ENST00000561749 LCA10Q71F78 164 aa11.04□□□□□ -0.64
SMPD3-202ENST00000561749 KRTAP9-3Q9BYQ3 159 aa11.03□□□□□ -0.64
SMPD3-202ENST00000561749 FSIP2Q5CZC0 6907 aa11.02□□□□□ -0.65
SMPD3-202ENST00000561749 FAM236AA0A1B0GUQ0 79 aa10.97□□□□□ -0.65
SMPD3-202ENST00000561749 FAM236BA0A1B0GV22 79 aa10.97□□□□□ -0.65
SMPD3-202ENST00000561749 CSAG1Q6PB30 78 aa10.95□□□□□ -0.66
SMPD3-202ENST00000561749 H3BPC8 53 aa10.93□□□□□ -0.66
SMPD3-202ENST00000561749 LCE2BO14633 110 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms