RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 F8WEM9 126 aa4.98□□□□□ -1.61
HERC1-210ENST00000560897 H3BQ85 93 aa4.98□□□□□ -1.61
HERC1-210ENST00000560897 KRTAP19-6Q3LI70 58 aa4.98□□□□□ -1.61
HERC1-210ENST00000560897 Q9BRP9 147 aa4.98□□□□□ -1.61
HERC1-210ENST00000560897 MT2AP02795 61 aa4.97□□□□□ -1.61
HERC1-210ENST00000560897 ATXN8Q156A1 80 aa4.97□□□□□ -1.61
HERC1-210ENST00000560897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.97□□□□□ -1.61
HERC1-210ENST00000560897 TEN1Q86WV5 123 aa4.97□□□□□ -1.61
HERC1-210ENST00000560897 PPDPFLQ8WWR9 84 aa4.97□□□□□ -1.61
HERC1-210ENST00000560897 ERC2-IT1O76042 136 aa4.96□□□□□ -1.62
HERC1-210ENST00000560897 ETDBQ3ZM63 59 aa4.96□□□□□ -1.62
HERC1-210ENST00000560897 Q6ZQY7 126 aa4.96□□□□□ -1.62
HERC1-210ENST00000560897 MTURNQ8N3F0 131 aa4.96□□□□□ -1.62
HERC1-210ENST00000560897 ST20-AS1Q8NBB2 130 aa4.96□□□□□ -1.62
HERC1-210ENST00000560897 CLEC2BQ92478 149 aa4.96□□□□□ -1.62
HERC1-210ENST00000560897 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
HERC1-210ENST00000560897 HRCT1Q6UXD1 115 aa4.95□□□□□ -1.62
HERC1-210ENST00000560897 ORMDL1Q9P0S3 153 aa4.95□□□□□ -1.62
HERC1-210ENST00000560897 A0A1B0GV72 72 aa4.94□□□□□ -1.62
HERC1-210ENST00000560897 TMEM256-PLSCR3K7ERE1 68 aa4.93□□□□□ -1.62
HERC1-210ENST00000560897 TRACP01848 142 aa4.93□□□□□ -1.62
HERC1-210ENST00000560897 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
HERC1-210ENST00000560897 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
HERC1-210ENST00000560897 TCL1BO95988 128 aa4.92□□□□□ -1.62
HERC1-210ENST00000560897 MT1FP04733 61 aa4.92□□□□□ -1.62
HERC1-210ENST00000560897 Q6ZVQ6 151 aa4.92□□□□□ -1.62
HERC1-210ENST00000560897 MUC12Q9UKN1 5478 aa4.91□□□□□ -1.62
HERC1-210ENST00000560897 H3BT86 120 aa4.91□□□□□ -1.62
HERC1-210ENST00000560897 LST1O00453 97 aa4.91□□□□□ -1.62
HERC1-210ENST00000560897 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
HERC1-210ENST00000560897 FAM240AA0A1B0GVK7 77 aa4.9□□□□□ -1.63
HERC1-210ENST00000560897 BAALC-AS2P0C853 105 aa4.9□□□□□ -1.63
HERC1-210ENST00000560897 SPRR1BP22528 89 aa4.9□□□□□ -1.63
HERC1-210ENST00000560897 ATP11AUNQ6ZP68 121 aa4.9□□□□□ -1.63
HERC1-210ENST00000560897 IGLV5-48A0A075B6I7 105 aa4.89□□□□□ -1.63
HERC1-210ENST00000560897 NDUFV3P56181 108 aaKnown RBP4.89□□□□□ -1.63
HERC1-210ENST00000560897 ANKRD29Q8N6D5 301 aa4.89□□□□□ -1.63
HERC1-210ENST00000560897 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
HERC1-210ENST00000560897 C9JAW5 83 aa4.88□□□□□ -1.63
HERC1-210ENST00000560897 Q6JHZ5 121 aa4.88□□□□□ -1.63
HERC1-210ENST00000560897 DSCR8Q96T75 97 aa4.87□□□□□ -1.63
HERC1-210ENST00000560897 RBM3P98179 157 aaKnown RBP4.86□□□□□ -1.63
HERC1-210ENST00000560897 JMJD7-PLA2G4BH0Y9G9 81 aa4.85□□□□□ -1.63
HERC1-210ENST00000560897 ACYP1P07311 99 aa4.84□□□□□ -1.63
HERC1-210ENST00000560897 FAM236DA0A1B0GTK5 79 aa4.83□□□□□ -1.64
HERC1-210ENST00000560897 FAM236CP0DP71 79 aa4.83□□□□□ -1.64
HERC1-210ENST00000560897 C5orf47Q569G3 176 aa4.83□□□□□ -1.64
HERC1-210ENST00000560897 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
HERC1-210ENST00000560897 MT-ATP8P03928 68 aa4.82□□□□□ -1.64
HERC1-210ENST00000560897 CD164Q04900 197 aa4.82□□□□□ -1.64
HERC1-210ENST00000560897 C1orf195Q5TG92 126 aa4.82□□□□□ -1.64
HERC1-210ENST00000560897 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
HERC1-210ENST00000560897 IMUPQ9GZP8 106 aa4.82□□□□□ -1.64
HERC1-210ENST00000560897 PDE6GP18545 87 aa4.81□□□□□ -1.64
HERC1-210ENST00000560897 TRBV7-7A0A0K0K1E9 115 aa4.8□□□□□ -1.64
HERC1-210ENST00000560897 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
HERC1-210ENST00000560897 V9GYY9 64 aa4.8□□□□□ -1.64
HERC1-210ENST00000560897 CCKP06307 115 aa4.79□□□□□ -1.64
HERC1-210ENST00000560897 Q5XG85 94 aa4.79□□□□□ -1.64
HERC1-210ENST00000560897 IGFL1Q6UW32 110 aa4.79□□□□□ -1.64
HERC1-210ENST00000560897 SS18L2Q9UHA2 77 aa4.79□□□□□ -1.64
HERC1-210ENST00000560897 ANAPC13Q9BS18 74 aa4.77□□□□□ -1.65
HERC1-210ENST00000560897 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
HERC1-210ENST00000560897 A0A0G2JQZ4 141 aa4.76□□□□□ -1.65
HERC1-210ENST00000560897 C14orf132Q9NPU4 83 aa4.76□□□□□ -1.65
HERC1-210ENST00000560897 TRBV7-4A0A0J9YYF1 115 aa4.75□□□□□ -1.65
HERC1-210ENST00000560897 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
HERC1-210ENST00000560897 LINC00643Q86TS7 51 aa4.75□□□□□ -1.65
HERC1-210ENST00000560897 A0A087WSZ3 146 aa4.74□□□□□ -1.65
HERC1-210ENST00000560897 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
HERC1-210ENST00000560897 LOC110117498A0A087WWA1 95 aa4.73□□□□□ -1.65
HERC1-210ENST00000560897 A0A1B0GW54 56 aa4.73□□□□□ -1.65
HERC1-210ENST00000560897 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
HERC1-210ENST00000560897 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
HERC1-210ENST00000560897 RBM12B-AS1Q9P1G2 102 aa4.72□□□□□ -1.65
HERC1-210ENST00000560897 A0A1W2PNM2 257 aa4.71□□□□□ -1.66
HERC1-210ENST00000560897 NREPQ16612 68 aa4.71□□□□□ -1.66
HERC1-210ENST00000560897 Q6ZQT0 140 aa4.71□□□□□ -1.66
HERC1-210ENST00000560897 KMT2DO14686 5537 aa4.68□□□□□ -1.66
HERC1-210ENST00000560897 HIST1H4AP62805 103 aaKnown RBP4.68□□□□□ -1.66
HERC1-210ENST00000560897 Q96NJ1 140 aa4.68□□□□□ -1.66
HERC1-210ENST00000560897 UBL5Q9BZL1 73 aa4.68□□□□□ -1.66
HERC1-210ENST00000560897 J3KT08 172 aa4.67□□□□□ -1.66
HERC1-210ENST00000560897 NDUFB1O75438 58 aa4.67□□□□□ -1.66
HERC1-210ENST00000560897 IGKV4-1P06312 121 aa4.67□□□□□ -1.66
HERC1-210ENST00000560897 ATP5EP2Q5VTU8 51 aa4.67□□□□□ -1.66
HERC1-210ENST00000560897 ATOX1O00244 68 aa4.66□□□□□ -1.66
HERC1-210ENST00000560897 UQCRQO14949 82 aa4.66□□□□□ -1.66
HERC1-210ENST00000560897 Q8N9P0 234 aaPredicted RBP4.65□□□□□ -1.67
HERC1-210ENST00000560897 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
HERC1-210ENST00000560897 FAM236AA0A1B0GUQ0 79 aa4.64□□□□□ -1.67
HERC1-210ENST00000560897 FAM236BA0A1B0GV22 79 aa4.64□□□□□ -1.67
HERC1-210ENST00000560897 CCDC179H3BU77 68 aa4.64□□□□□ -1.67
HERC1-210ENST00000560897 BPY2O14599 106 aa4.64□□□□□ -1.67
HERC1-210ENST00000560897 DEFB116Q30KQ4 102 aa4.64□□□□□ -1.67
HERC1-210ENST00000560897 A8MWP4 228 aa4.63□□□□□ -1.67
HERC1-210ENST00000560897 A6NN06 94 aa4.62□□□□□ -1.67
HERC1-210ENST00000560897 COX7CP15954 63 aa4.62□□□□□ -1.67
HERC1-210ENST00000560897 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
HERC1-210ENST00000560897 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms