RNA–Protein interactions for RNA: ENST00000560655.5

PCAT29-204, prostate cancer associated transcript 29, humanhuman

TSL 3

Gene PCAT29, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-204ENST00000560655 TMEM254Q8TBM7 123 aa3.59□□□□□ -1.83
PCAT29-204ENST00000560655 SRRM2Q9UQ35 2752 aaKnown RBP3.58□□□□□ -1.84
PCAT29-204ENST00000560655 A8MWP4 228 aa3.58□□□□□ -1.84
PCAT29-204ENST00000560655 ZCCHC13Q8WW36 166 aaKnown RBP3.58□□□□□ -1.84
PCAT29-204ENST00000560655 LRP1BQ9NZR2 4599 aa3.58□□□□□ -1.84
PCAT29-204ENST00000560655 PKD1P98161 4303 aa3.57□□□□□ -1.84
PCAT29-204ENST00000560655 OXTP01178 125 aa3.57□□□□□ -1.84
PCAT29-204ENST00000560655 TGP01266 2768 aa3.57□□□□□ -1.84
PCAT29-204ENST00000560655 SACSQ9NZJ4 4579 aa3.56□□□□□ -1.84
PCAT29-204ENST00000560655 J3KT08 172 aa3.56□□□□□ -1.84
PCAT29-204ENST00000560655 NDUFC1O43677 76 aa3.56□□□□□ -1.84
PCAT29-204ENST00000560655 ASB16-AS1Q495Z4 193 aa3.56□□□□□ -1.84
PCAT29-204ENST00000560655 HRCT1Q6UXD1 115 aa3.56□□□□□ -1.84
PCAT29-204ENST00000560655 WFDC13Q8IUB5 93 aa3.56□□□□□ -1.84
PCAT29-204ENST00000560655 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
PCAT29-204ENST00000560655 MMP24-AS1A0A0U1RRL7 71 aa3.55□□□□□ -1.84
PCAT29-204ENST00000560655 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
PCAT29-204ENST00000560655 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
PCAT29-204ENST00000560655 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
PCAT29-204ENST00000560655 SSBP3-AS1Q7Z2R9 100 aa3.55□□□□□ -1.84
PCAT29-204ENST00000560655 CD164Q04900 197 aa3.54□□□□□ -1.84
PCAT29-204ENST00000560655 CASC2Q6XLA1 102 aa3.54□□□□□ -1.84
PCAT29-204ENST00000560655 A0A087X002 238 aa3.52□□□□□ -1.85
PCAT29-204ENST00000560655 NDUFB1O75438 58 aa3.52□□□□□ -1.85
PCAT29-204ENST00000560655 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
PCAT29-204ENST00000560655 KRTAP13-2Q52LG2 175 aa3.52□□□□□ -1.85
PCAT29-204ENST00000560655 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
PCAT29-204ENST00000560655 KRTAP3-1Q9BYR8 98 aa3.52□□□□□ -1.85
PCAT29-204ENST00000560655 C8orf17Q9NRJ1 99 aa3.52□□□□□ -1.85
PCAT29-204ENST00000560655 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
PCAT29-204ENST00000560655 A0A1B0GVX0 72 aa3.51□□□□□ -1.85
PCAT29-204ENST00000560655 ATP5EP56381 51 aaPredicted RBP3.51□□□□□ -1.85
PCAT29-204ENST00000560655 FAM229BQ4G0N7 80 aa3.51□□□□□ -1.85
PCAT29-204ENST00000560655 NOTCH2NLQ7Z3S9 236 aa3.51□□□□□ -1.85
PCAT29-204ENST00000560655 DYNC1H1Q14204 4646 aaKnown RBP3.51□□□□□ -1.85
PCAT29-204ENST00000560655 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
PCAT29-204ENST00000560655 hDV103S1A0JD37 113 aa3.5□□□□□ -1.85
PCAT29-204ENST00000560655 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
PCAT29-204ENST00000560655 H3BPC8 53 aa3.49□□□□□ -1.85
PCAT29-204ENST00000560655 Q5XG85 94 aa3.49□□□□□ -1.85
PCAT29-204ENST00000560655 LINC00336Q6ZUF6 198 aa3.49□□□□□ -1.85
PCAT29-204ENST00000560655 IGHV6-1A0A0B4J1U7 121 aa3.48□□□□□ -1.85
PCAT29-204ENST00000560655 TRAV22A0A0B4J277 110 aa3.48□□□□□ -1.85
PCAT29-204ENST00000560655 H0Y9P7 68 aa3.48□□□□□ -1.85
PCAT29-204ENST00000560655 MP68P56378 58 aa3.48□□□□□ -1.85
PCAT29-204ENST00000560655 LINC00208Q96KT6 92 aa3.48□□□□□ -1.85
PCAT29-204ENST00000560655 CDK2AP2O75956 126 aa3.47□□□□□ -1.85
PCAT29-204ENST00000560655 MRPL34Q9BQ48 92 aaKnown RBP3.47□□□□□ -1.85
PCAT29-204ENST00000560655 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
PCAT29-204ENST00000560655 C1orf195Q5TG92 126 aa3.46□□□□□ -1.86
PCAT29-204ENST00000560655 SPINK6Q6UWN8 80 aa3.46□□□□□ -1.86
PCAT29-204ENST00000560655 CYP4F30PQ9H0H9 118 aa3.46□□□□□ -1.86
PCAT29-204ENST00000560655 VPS13BQ7Z7G8 4022 aa3.45□□□□□ -1.86
PCAT29-204ENST00000560655 SMIM26A0A096LP01 95 aa3.45□□□□□ -1.86
PCAT29-204ENST00000560655 KRTAP10-4P60372 401 aaPredicted RBP3.45□□□□□ -1.86
PCAT29-204ENST00000560655 KRTAP13-3Q3SY46 172 aa3.45□□□□□ -1.86
PCAT29-204ENST00000560655 FP248Q71RG6 208 aaPredicted RBP3.45□□□□□ -1.86
PCAT29-204ENST00000560655 C1orf64Q8NEQ6 169 aa3.45□□□□□ -1.86
PCAT29-204ENST00000560655 APOBP04114 4563 aaKnown RBP3.44□□□□□ -1.86
PCAT29-204ENST00000560655 C8orf87E5RJ46 101 aa3.44□□□□□ -1.86
PCAT29-204ENST00000560655 PLA2G1BP04054 148 aaKnown RBP3.44□□□□□ -1.86
PCAT29-204ENST00000560655 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
PCAT29-204ENST00000560655 C4orf26Q17RF5 130 aa3.43□□□□□ -1.86
PCAT29-204ENST00000560655 Q5W150 140 aa3.43□□□□□ -1.86
PCAT29-204ENST00000560655 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
PCAT29-204ENST00000560655 SMR3BP02814 79 aaPredicted RBP3.42□□□□□ -1.86
PCAT29-204ENST00000560655 LINC00313P59037 77 aa3.42□□□□□ -1.86
PCAT29-204ENST00000560655 PRR4Q16378 134 aa3.42□□□□□ -1.86
PCAT29-204ENST00000560655 TYMSOSQ8TAI1 123 aa3.42□□□□□ -1.86
PCAT29-204ENST00000560655 FAT1Q14517 4588 aa3.42□□□□□ -1.86
PCAT29-204ENST00000560655 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
PCAT29-204ENST00000560655 RYR2Q92736 4967 aa3.41□□□□□ -1.86
PCAT29-204ENST00000560655 IGLV7-46A0A075B6I9 117 aa3.41□□□□□ -1.86
PCAT29-204ENST00000560655 NDUFS5O43920 106 aa3.41□□□□□ -1.86
PCAT29-204ENST00000560655 SPINK1P00995 79 aa3.41□□□□□ -1.86
PCAT29-204ENST00000560655 PRR26Q8N8Z3 221 aa3.41□□□□□ -1.86
PCAT29-204ENST00000560655 Q8N9P0 234 aaPredicted RBP3.41□□□□□ -1.86
PCAT29-204ENST00000560655 PKHD1P08F94 4074 aa3.4□□□□□ -1.86
PCAT29-204ENST00000560655 LIMD2Q9BT23 127 aa3.4□□□□□ -1.87
PCAT29-204ENST00000560655 RPS29P62273 56 aaKnown RBP3.39□□□□□ -1.87
PCAT29-204ENST00000560655 PCOTHQ58A44 107 aa3.38□□□□□ -1.87
PCAT29-204ENST00000560655 SPAG11AQ6PDA7 123 aa3.38□□□□□ -1.87
PCAT29-204ENST00000560655 LINC00304Q8N9R0 145 aa3.38□□□□□ -1.87
PCAT29-204ENST00000560655 LOC101927531A0A1B0GV80 90 aa3.37□□□□□ -1.87
PCAT29-204ENST00000560655 Q1T7F1 81 aa3.36□□□□□ -1.87
PCAT29-204ENST00000560655 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
PCAT29-204ENST00000560655 MPLKIPQ8TAP9 179 aa3.35□□□□□ -1.87
PCAT29-204ENST00000560655 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
PCAT29-204ENST00000560655 RETNLBQ9BQ08 111 aa3.34□□□□□ -1.87
PCAT29-204ENST00000560655 HRES1P13985 223 aa3.33□□□□□ -1.88
PCAT29-204ENST00000560655 COA5Q86WW8 74 aa3.33□□□□□ -1.88
PCAT29-204ENST00000560655 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
PCAT29-204ENST00000560655 KMT2CQ8NEZ4 4911 aaKnown RBP3.32□□□□□ -1.88
PCAT29-204ENST00000560655 HSPG2P98160 4391 aa3.31□□□□□ -1.88
PCAT29-204ENST00000560655 A8MUU9 505 aa3.3□□□□□ -1.88
PCAT29-204ENST00000560655 FAT3Q8TDW7 4589 aa3.3□□□□□ -1.88
PCAT29-204ENST00000560655 DMAC1Q96GE9 116 aa3.29□□□□□ -1.88
PCAT29-204ENST00000560655 C20orf166-AS1Q96NR2 134 aa3.29□□□□□ -1.88
PCAT29-204ENST00000560655 V9GYY9 64 aa3.29□□□□□ -1.88
PCAT29-204ENST00000560655 TNXBP22105 4242 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms