RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 VPS13DQ5THJ4 4388 aa2.65□□□□□ -1.99
TMOD3-207ENST00000560549 ST20-AS1Q8NBB2 130 aa2.65□□□□□ -1.99
TMOD3-207ENST00000560549 LAMTOR3Q9UHA4 124 aa2.65□□□□□ -1.99
TMOD3-207ENST00000560549 ALMS1Q8TCU4 4167 aa2.64□□□□□ -1.99
TMOD3-207ENST00000560549 DNAH10Q8IVF4 4471 aa2.64□□□□□ -1.99
TMOD3-207ENST00000560549 A8MUN3 132 aa2.64□□□□□ -1.99
TMOD3-207ENST00000560549 C16orf90A8MZG2 172 aa2.64□□□□□ -1.99
TMOD3-207ENST00000560549 PSCAO43653 123 aa2.64□□□□□ -1.99
TMOD3-207ENST00000560549 RBM3P98179 157 aaKnown RBP2.64□□□□□ -1.99
TMOD3-207ENST00000560549 Q6JHZ5 121 aa2.64□□□□□ -1.99
TMOD3-207ENST00000560549 DEFB105AQ8NG35 78 aa2.64□□□□□ -1.99
TMOD3-207ENST00000560549 TRBV7-4A0A0J9YYF1 115 aa2.63□□□□□ -1.99
TMOD3-207ENST00000560549 Q6ZRX8 168 aa2.63□□□□□ -1.99
TMOD3-207ENST00000560549 PHF5AQ7RTV0 110 aaKnown RBP2.63□□□□□ -1.99
TMOD3-207ENST00000560549 C3orf22Q8N5N4 141 aa2.63□□□□□ -1.99
TMOD3-207ENST00000560549 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
TMOD3-207ENST00000560549 KMT2AQ03164 3969 aa2.63□□□□□ -1.99
TMOD3-207ENST00000560549 A0A087WVE0 104 aa2.62□□□□□ -1.99
TMOD3-207ENST00000560549 A0A0G2JQZ4 141 aa2.62□□□□□ -1.99
TMOD3-207ENST00000560549 ETDCA0A1B0GVM5 59 aa2.62□□□□□ -1.99
TMOD3-207ENST00000560549 H3BQ85 93 aa2.62□□□□□ -1.99
TMOD3-207ENST00000560549 CCDC179H3BU77 68 aa2.62□□□□□ -1.99
TMOD3-207ENST00000560549 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
TMOD3-207ENST00000560549 IGLV5-48A0A075B6I7 105 aa2.61□□□□□ -1.99
TMOD3-207ENST00000560549 A0A087WTM6 91 aa2.61□□□□□ -1.99
TMOD3-207ENST00000560549 FAM236AA0A1B0GUQ0 79 aa2.61□□□□□ -1.99
TMOD3-207ENST00000560549 FAM236BA0A1B0GV22 79 aa2.61□□□□□ -1.99
TMOD3-207ENST00000560549 A0A1W2PNM2 257 aa2.61□□□□□ -1.99
TMOD3-207ENST00000560549 HIST1H4AP62805 103 aaKnown RBP2.61□□□□□ -1.99
TMOD3-207ENST00000560549 DSCR8Q96T75 97 aa2.61□□□□□ -1.99
TMOD3-207ENST00000560549 DMBT1Q9UGM3 2413 aaPredicted RBP2.6□□□□□ -1.99
TMOD3-207ENST00000560549 UBE2BP63146 152 aa2.6□□□□□ -1.99
TMOD3-207ENST00000560549 PRLHP81277 87 aa2.6□□□□□ -1.99
TMOD3-207ENST00000560549 DNAH6Q9C0G6 4158 aa2.6□□□□□ -1.99
TMOD3-207ENST00000560549 PDE6GP18545 87 aa2.59□□□□□ -1.99
TMOD3-207ENST00000560549 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
TMOD3-207ENST00000560549 SCXQ7RTU7 201 aa2.59□□□□□ -1.99
TMOD3-207ENST00000560549 PKHD1P08F94 4074 aa2.59□□□□□ -2
TMOD3-207ENST00000560549 UQCRQO14949 82 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 HAMPP81172 84 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 C1orf134Q5TEV5 83 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 KRTAP13-1Q8IUC0 172 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 SPACA4Q8TDM5 124 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 DNAH17Q9UFH2 4485 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 RTL8CO15255 209 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 ZNF861PO60384 105 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 Q5W150 140 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 ADM2Q7Z4H4 148 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 HIGD2AQ9BW72 106 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 UBL5Q9BZL1 73 aa2.58□□□□□ -2
TMOD3-207ENST00000560549 DNAH2Q9P225 4427 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 HSPG2P98160 4391 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 A8MWP4 228 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 J3KT08 172 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 K7ERS5 55 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 BCE1O60756 84 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 CRYGAP11844 174 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 C1orf137Q5JT78 98 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 ATP5EP2Q5VTU8 51 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 IGFL1Q6UW32 110 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 Q8N9L7 120 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 DPH3Q96FX2 82 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
TMOD3-207ENST00000560549 MUC2Q02817 5179 aa2.56□□□□□ -2
TMOD3-207ENST00000560549 A0A1B0GW54 56 aa2.56□□□□□ -2
TMOD3-207ENST00000560549 SPRR1BP22528 89 aa2.56□□□□□ -2
TMOD3-207ENST00000560549 LINC00474Q9P2X8 69 aa2.56□□□□□ -2
TMOD3-207ENST00000560549 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
TMOD3-207ENST00000560549 IGKV4-1P06312 121 aa2.55□□□□□ -2
TMOD3-207ENST00000560549 COX7CP15954 63 aa2.55□□□□□ -2
TMOD3-207ENST00000560549 NREPQ16612 68 aa2.55□□□□□ -2
TMOD3-207ENST00000560549 DEFB116Q30KQ4 102 aa2.55□□□□□ -2
TMOD3-207ENST00000560549 SPRR4Q96PI1 79 aa2.55□□□□□ -2
TMOD3-207ENST00000560549 PLAC8Q9NZF1 115 aa2.55□□□□□ -2
TMOD3-207ENST00000560549 DYNC1H1Q14204 4646 aaKnown RBP2.55□□□□□ -2
TMOD3-207ENST00000560549 ATOX1O00244 68 aa2.54□□□□□ -2
TMOD3-207ENST00000560549 TMEM258P61165 79 aa2.54□□□□□ -2
TMOD3-207ENST00000560549 ANAPC11Q9NYG5 84 aa2.54□□□□□ -2
TMOD3-207ENST00000560549 PSORS1C2Q9UIG4 136 aa2.54□□□□□ -2
TMOD3-207ENST00000560549 DNAH11Q96DT5 4516 aa2.54□□□□□ -2
TMOD3-207ENST00000560549 FAT2Q9NYQ8 4349 aa2.53□□□□□ -2
TMOD3-207ENST00000560549 KRTAP10-1P60331 282 aa2.53□□□□□ -2
TMOD3-207ENST00000560549 KTN1-AS1Q86SY8 53 aa2.53□□□□□ -2
TMOD3-207ENST00000560549 SERP2Q8N6R1 65 aa2.53□□□□□ -2
TMOD3-207ENST00000560549 A8MUU9 505 aa2.52□□□□□ -2.01
TMOD3-207ENST00000560549 F8WEM9 126 aa2.52□□□□□ -2.01
TMOD3-207ENST00000560549 C9orf153Q5TBE3 101 aa2.52□□□□□ -2.01
TMOD3-207ENST00000560549 MYCBP2O75592 4640 aa2.52□□□□□ -2.01
TMOD3-207ENST00000560549 A0A087WSZ3 146 aa2.52□□□□□ -2.01
TMOD3-207ENST00000560549 RPL37AP61513 92 aaKnown RBP2.52□□□□□ -2.01
TMOD3-207ENST00000560549 LINC00483Q53H64 154 aa2.52□□□□□ -2.01
TMOD3-207ENST00000560549 APOBP04114 4563 aaKnown RBP2.51□□□□□ -2.01
TMOD3-207ENST00000560549 DNAH8Q96JB1 4490 aa2.51□□□□□ -2.01
TMOD3-207ENST00000560549 TRAV7A0A075B6U4 112 aa2.51□□□□□ -2.01
TMOD3-207ENST00000560549 K7EQZ3 153 aa2.51□□□□□ -2.01
TMOD3-207ENST00000560549 LCA10Q71F78 164 aa2.51□□□□□ -2.01
TMOD3-207ENST00000560549 A6NED7 52 aa2.5□□□□□ -2.01
TMOD3-207ENST00000560549 IGLV7-43P04211 117 aa2.5□□□□□ -2.01
TMOD3-207ENST00000560549 HRCT1Q6UXD1 115 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms