RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 Q6ZSA8 131 aa5.83□□□□□ -1.48
RTF1-206ENST00000560447 SSBP3-AS1Q7Z2R9 100 aa5.83□□□□□ -1.48
RTF1-206ENST00000560447 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
RTF1-206ENST00000560447 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
RTF1-206ENST00000560447 ASB16-AS1Q495Z4 193 aa5.81□□□□□ -1.48
RTF1-206ENST00000560447 WFDC13Q8IUB5 93 aa5.81□□□□□ -1.48
RTF1-206ENST00000560447 Q96NJ1 140 aa5.81□□□□□ -1.48
RTF1-206ENST00000560447 TP53AIP1Q9HCN2 124 aa5.81□□□□□ -1.48
RTF1-206ENST00000560447 KMT2AQ03164 3969 aa5.81□□□□□ -1.48
RTF1-206ENST00000560447 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
RTF1-206ENST00000560447 MMP24-AS1A0A0U1RRL7 71 aa5.8□□□□□ -1.48
RTF1-206ENST00000560447 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
RTF1-206ENST00000560447 FAM229BQ4G0N7 80 aa5.79□□□□□ -1.48
RTF1-206ENST00000560447 SMIM26A0A096LP01 95 aa5.78□□□□□ -1.48
RTF1-206ENST00000560447 hDV103S1A0JD37 113 aa5.78□□□□□ -1.48
RTF1-206ENST00000560447 CDK2AP2O75956 126 aa5.78□□□□□ -1.48
RTF1-206ENST00000560447 OXTP01178 125 aa5.78□□□□□ -1.48
RTF1-206ENST00000560447 CIRBP-AS1Q8TBR5 109 aa5.78□□□□□ -1.48
RTF1-206ENST00000560447 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
RTF1-206ENST00000560447 FBN3Q75N90 2809 aa5.78□□□□□ -1.48
RTF1-206ENST00000560447 A0A1B0GVX0 72 aa5.77□□□□□ -1.49
RTF1-206ENST00000560447 Q5XG85 94 aa5.76□□□□□ -1.49
RTF1-206ENST00000560447 SPANXA2-OT1Q8N9U9 137 aa5.76□□□□□ -1.49
RTF1-206ENST00000560447 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
RTF1-206ENST00000560447 TRAV22A0A0B4J277 110 aa5.75□□□□□ -1.49
RTF1-206ENST00000560447 H0Y9P7 68 aa5.75□□□□□ -1.49
RTF1-206ENST00000560447 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
RTF1-206ENST00000560447 KRTAP17-1Q9BYP8 105 aa5.74□□□□□ -1.49
RTF1-206ENST00000560447 PKD1P98161 4303 aa5.73□□□□□ -1.49
RTF1-206ENST00000560447 C8orf87E5RJ46 101 aa5.73□□□□□ -1.49
RTF1-206ENST00000560447 TGP01266 2768 aa5.72□□□□□ -1.49
RTF1-206ENST00000560447 KRTAP10-1P60331 282 aa5.72□□□□□ -1.49
RTF1-206ENST00000560447 LINC00336Q6ZUF6 198 aa5.72□□□□□ -1.49
RTF1-206ENST00000560447 SVIPQ8NHG7 77 aa5.72□□□□□ -1.49
RTF1-206ENST00000560447 LINC00208Q96KT6 92 aa5.72□□□□□ -1.49
RTF1-206ENST00000560447 FAT2Q9NYQ8 4349 aa5.72□□□□□ -1.49
RTF1-206ENST00000560447 HRCT1Q6UXD1 115 aa5.71□□□□□ -1.5
RTF1-206ENST00000560447 MRPL34Q9BQ48 92 aaKnown RBP5.71□□□□□ -1.5
RTF1-206ENST00000560447 IGHV6-1A0A0B4J1U7 121 aa5.69□□□□□ -1.5
RTF1-206ENST00000560447 C1orf64Q8NEQ6 169 aa5.69□□□□□ -1.5
RTF1-206ENST00000560447 ANAPC11Q9NYG5 84 aa5.69□□□□□ -1.5
RTF1-206ENST00000560447 LIMD2Q9BT23 127 aa5.68□□□□□ -1.5
RTF1-206ENST00000560447 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
RTF1-206ENST00000560447 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.5
RTF1-206ENST00000560447 KRTAP13-2Q52LG2 175 aa5.65□□□□□ -1.5
RTF1-206ENST00000560447 FP248Q71RG6 208 aaPredicted RBP5.65□□□□□ -1.5
RTF1-206ENST00000560447 KRTAP1-4P0C5Y4 121 aa5.64□□□□□ -1.51
RTF1-206ENST00000560447 IGLV7-46A0A075B6I9 117 aa5.63□□□□□ -1.51
RTF1-206ENST00000560447 A0A087X002 238 aa5.63□□□□□ -1.51
RTF1-206ENST00000560447 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
RTF1-206ENST00000560447 RPS29P62273 56 aaKnown RBP5.63□□□□□ -1.51
RTF1-206ENST00000560447 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
RTF1-206ENST00000560447 HYDINQ4G0P3 5121 aa5.63□□□□□ -1.51
RTF1-206ENST00000560447 NDUFS5O43920 106 aa5.62□□□□□ -1.51
RTF1-206ENST00000560447 C4orf26Q17RF5 130 aa5.62□□□□□ -1.51
RTF1-206ENST00000560447 V9GYY9 64 aa5.62□□□□□ -1.51
RTF1-206ENST00000560447 SPINK1P00995 79 aa5.61□□□□□ -1.51
RTF1-206ENST00000560447 Q1T7F1 81 aa5.61□□□□□ -1.51
RTF1-206ENST00000560447 LINC00313P59037 77 aa5.6□□□□□ -1.51
RTF1-206ENST00000560447 C1orf195Q5TG92 126 aa5.6□□□□□ -1.51
RTF1-206ENST00000560447 SPAG11AQ6PDA7 123 aa5.6□□□□□ -1.51
RTF1-206ENST00000560447 Q8N1X5 172 aa5.6□□□□□ -1.51
RTF1-206ENST00000560447 KRTAP13-3Q3SY46 172 aa5.59□□□□□ -1.51
RTF1-206ENST00000560447 Q8N9P0 234 aaPredicted RBP5.59□□□□□ -1.51
RTF1-206ENST00000560447 DYNC1H1Q14204 4646 aaKnown RBP5.58□□□□□ -1.52
RTF1-206ENST00000560447 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
RTF1-206ENST00000560447 TYMSOSQ8TAI1 123 aa5.57□□□□□ -1.52
RTF1-206ENST00000560447 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
RTF1-206ENST00000560447 KRTAP5-3Q6L8H2 238 aa5.55□□□□□ -1.52
RTF1-206ENST00000560447 VPS13BQ7Z7G8 4022 aa5.54□□□□□ -1.52
RTF1-206ENST00000560447 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
RTF1-206ENST00000560447 PRR4Q16378 134 aa5.53□□□□□ -1.52
RTF1-206ENST00000560447 PCOTHQ58A44 107 aa5.52□□□□□ -1.53
RTF1-206ENST00000560447 COA5Q86WW8 74 aa5.52□□□□□ -1.53
RTF1-206ENST00000560447 LINC00304Q8N9R0 145 aa5.52□□□□□ -1.53
RTF1-206ENST00000560447 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
RTF1-206ENST00000560447 Q5W150 140 aa5.51□□□□□ -1.53
RTF1-206ENST00000560447 APOBP04114 4563 aaKnown RBP5.5□□□□□ -1.53
RTF1-206ENST00000560447 PRO0628Q9UI54 55 aa5.5□□□□□ -1.53
RTF1-206ENST00000560447 IGKV2-30P06310 120 aa5.48□□□□□ -1.53
RTF1-206ENST00000560447 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
RTF1-206ENST00000560447 RYR2Q92736 4967 aa5.46□□□□□ -1.53
RTF1-206ENST00000560447 ACYP2P14621 99 aa5.46□□□□□ -1.54
RTF1-206ENST00000560447 KRTAP10-4P60372 401 aaPredicted RBP5.46□□□□□ -1.54
RTF1-206ENST00000560447 PRR26Q8N8Z3 221 aa5.45□□□□□ -1.54
RTF1-206ENST00000560447 PKHD1P08F94 4074 aa5.44□□□□□ -1.54
RTF1-206ENST00000560447 HRES1P13985 223 aa5.44□□□□□ -1.54
RTF1-206ENST00000560447 DMAC1Q96GE9 116 aa5.44□□□□□ -1.54
RTF1-206ENST00000560447 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
RTF1-206ENST00000560447 SMR3BP02814 79 aaPredicted RBP5.4□□□□□ -1.54
RTF1-206ENST00000560447 Q75L30 129 aa5.4□□□□□ -1.54
RTF1-206ENST00000560447 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
RTF1-206ENST00000560447 Q5VV11 94 aa5.39□□□□□ -1.55
RTF1-206ENST00000560447 A8MUN3 132 aa5.38□□□□□ -1.55
RTF1-206ENST00000560447 PSPHP1O15172 72 aa5.38□□□□□ -1.55
RTF1-206ENST00000560447 FAT1Q14517 4588 aa5.37□□□□□ -1.55
RTF1-206ENST00000560447 A8MUU9 505 aa5.37□□□□□ -1.55
RTF1-206ENST00000560447 C7orf65Q6ZTY9 151 aa5.37□□□□□ -1.55
RTF1-206ENST00000560447 C20orf166-AS1Q96NR2 134 aa5.37□□□□□ -1.55
RTF1-206ENST00000560447 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms