RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 GHRHP01286 108 aa6.35□□□□□ -1.39
RABGGTA-213ENST00000560127 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
RABGGTA-213ENST00000560127 H3BQ85 93 aa6.34□□□□□ -1.39
RABGGTA-213ENST00000560127 BAALC-AS2P0C853 105 aa6.34□□□□□ -1.39
RABGGTA-213ENST00000560127 ATXN8Q156A1 80 aa6.33□□□□□ -1.4
RABGGTA-213ENST00000560127 ANKRD29Q8N6D5 301 aa6.33□□□□□ -1.4
RABGGTA-213ENST00000560127 FAM236DA0A1B0GTK5 79 aa6.32□□□□□ -1.4
RABGGTA-213ENST00000560127 A8MUU9 505 aa6.32□□□□□ -1.4
RABGGTA-213ENST00000560127 FAM236CP0DP71 79 aa6.32□□□□□ -1.4
RABGGTA-213ENST00000560127 SS18L2Q9UHA2 77 aa6.32□□□□□ -1.4
RABGGTA-213ENST00000560127 C9orf118A6NHY6 69 aa6.31□□□□□ -1.4
RABGGTA-213ENST00000560127 PCP4L1A6NKN8 68 aa6.31□□□□□ -1.4
RABGGTA-213ENST00000560127 CCKP06307 115 aa6.31□□□□□ -1.4
RABGGTA-213ENST00000560127 LINC00472Q9H8W2 130 aa6.29□□□□□ -1.4
RABGGTA-213ENST00000560127 A0A1W2PPM0 123 aa6.28□□□□□ -1.4
RABGGTA-213ENST00000560127 KRTAP16-1A8MUX0 517 aa6.28□□□□□ -1.4
RABGGTA-213ENST00000560127 RBM3P98179 157 aaKnown RBP6.28□□□□□ -1.4
RABGGTA-213ENST00000560127 MPLKIPQ8TAP9 179 aa6.28□□□□□ -1.4
RABGGTA-213ENST00000560127 C9JAW5 83 aa6.27□□□□□ -1.41
RABGGTA-213ENST00000560127 DEFB116Q30KQ4 102 aa6.26□□□□□ -1.41
RABGGTA-213ENST00000560127 KRTAP20-1Q3LI63 56 aa6.26□□□□□ -1.41
RABGGTA-213ENST00000560127 Q6ZQT0 140 aa6.26□□□□□ -1.41
RABGGTA-213ENST00000560127 MTURNQ8N3F0 131 aa6.26□□□□□ -1.41
RABGGTA-213ENST00000560127 LOC110117498A0A087WWA1 95 aa6.25□□□□□ -1.41
RABGGTA-213ENST00000560127 HRES1P13985 223 aa6.25□□□□□ -1.41
RABGGTA-213ENST00000560127 DSCR10P59022 87 aa6.25□□□□□ -1.41
RABGGTA-213ENST00000560127 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
RABGGTA-213ENST00000560127 LYRM7Q5U5X0 104 aa6.24□□□□□ -1.41
RABGGTA-213ENST00000560127 DSCR8Q96T75 97 aa6.24□□□□□ -1.41
RABGGTA-213ENST00000560127 SIGMAR1Q99720 223 aa6.24□□□□□ -1.41
RABGGTA-213ENST00000560127 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
RABGGTA-213ENST00000560127 RBM12B-AS1Q9P1G2 102 aa6.24□□□□□ -1.41
RABGGTA-213ENST00000560127 IGKV4-1P06312 121 aa6.23□□□□□ -1.41
RABGGTA-213ENST00000560127 C14orf132Q9NPU4 83 aa6.23□□□□□ -1.41
RABGGTA-213ENST00000560127 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
RABGGTA-213ENST00000560127 JMJD7-PLA2G4BH0Y9G9 81 aa6.2□□□□□ -1.42
RABGGTA-213ENST00000560127 H3BT86 120 aa6.2□□□□□ -1.42
RABGGTA-213ENST00000560127 COL5A1-AS1Q5SY13 56 aa6.18□□□□□ -1.42
RABGGTA-213ENST00000560127 PRO0461Q9UI25 63 aa6.18□□□□□ -1.42
RABGGTA-213ENST00000560127 SPCS1Q9Y6A9 102 aa6.18□□□□□ -1.42
RABGGTA-213ENST00000560127 A0A1B0GVX0 72 aa6.16□□□□□ -1.42
RABGGTA-213ENST00000560127 IGHV6-1A0A0B4J1U7 121 aa6.15□□□□□ -1.42
RABGGTA-213ENST00000560127 LINC00313P59037 77 aa6.15□□□□□ -1.42
RABGGTA-213ENST00000560127 Q8N9P0 234 aaPredicted RBP6.15□□□□□ -1.42
RABGGTA-213ENST00000560127 K7EP34 96 aa6.14□□□□□ -1.43
RABGGTA-213ENST00000560127 PDE6GP18545 87 aa6.14□□□□□ -1.43
RABGGTA-213ENST00000560127 A0A1B0GW54 56 aa6.12□□□□□ -1.43
RABGGTA-213ENST00000560127 MDN1Q9NU22 5596 aa6.11□□□□□ -1.43
RABGGTA-213ENST00000560127 IGKV3D-7A0A0C4DH55 119 aa6.11□□□□□ -1.43
RABGGTA-213ENST00000560127 C21orf62-AS1Q17RA5 79 aa6.11□□□□□ -1.43
RABGGTA-213ENST00000560127 A8MWP4 228 aa6.1□□□□□ -1.43
RABGGTA-213ENST00000560127 J3KT08 172 aa6.1□□□□□ -1.43
RABGGTA-213ENST00000560127 C8orf87E5RJ46 101 aa6.09□□□□□ -1.43
RABGGTA-213ENST00000560127 KMT2DO14686 5537 aa6.08□□□□□ -1.44
RABGGTA-213ENST00000560127 C8orf17Q9NRJ1 99 aa6.06□□□□□ -1.44
RABGGTA-213ENST00000560127 NREPQ16612 68 aa6.05□□□□□ -1.44
RABGGTA-213ENST00000560127 MMP24-AS1A0A0U1RRL7 71 aa6.04□□□□□ -1.44
RABGGTA-213ENST00000560127 K7EQZ3 153 aa6.04□□□□□ -1.44
RABGGTA-213ENST00000560127 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
RABGGTA-213ENST00000560127 Q6ZVQ6 151 aa6.03□□□□□ -1.44
RABGGTA-213ENST00000560127 NDUFB1O75438 58 aa6□□□□□ -1.45
RABGGTA-213ENST00000560127 KRTAP5-9P26371 169 aa6□□□□□ -1.45
RABGGTA-213ENST00000560127 Q8N9L7 120 aa6□□□□□ -1.45
RABGGTA-213ENST00000560127 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
RABGGTA-213ENST00000560127 GTF2H5Q6ZYL4 71 aa5.98□□□□□ -1.45
RABGGTA-213ENST00000560127 A6NN06 94 aa5.97□□□□□ -1.45
RABGGTA-213ENST00000560127 ETDBQ3ZM63 59 aa5.97□□□□□ -1.45
RABGGTA-213ENST00000560127 F8W1H4 67 aa5.96□□□□□ -1.46
RABGGTA-213ENST00000560127 BPY2O14599 106 aa5.96□□□□□ -1.46
RABGGTA-213ENST00000560127 SPINK7P58062 85 aa5.96□□□□□ -1.46
RABGGTA-213ENST00000560127 TMEM254Q8TBM7 123 aa5.96□□□□□ -1.46
RABGGTA-213ENST00000560127 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
RABGGTA-213ENST00000560127 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
RABGGTA-213ENST00000560127 A0A1B0GV90 55 aa5.94□□□□□ -1.46
RABGGTA-213ENST00000560127 MRPL34Q9BQ48 92 aaKnown RBP5.94□□□□□ -1.46
RABGGTA-213ENST00000560127 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
RABGGTA-213ENST00000560127 WFDC13Q8IUB5 93 aa5.9□□□□□ -1.46
RABGGTA-213ENST00000560127 Q5W150 140 aa5.89□□□□□ -1.47
RABGGTA-213ENST00000560127 UBL5Q9BZL1 73 aa5.88□□□□□ -1.47
RABGGTA-213ENST00000560127 MT1BP07438 61 aa5.87□□□□□ -1.47
RABGGTA-213ENST00000560127 CASC2Q6XLA1 102 aa5.87□□□□□ -1.47
RABGGTA-213ENST00000560127 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
RABGGTA-213ENST00000560127 NDUFS5O43920 106 aa5.83□□□□□ -1.48
RABGGTA-213ENST00000560127 KRTAP10-5P60370 271 aa5.83□□□□□ -1.48
RABGGTA-213ENST00000560127 CXCL6P80162 114 aa5.81□□□□□ -1.48
RABGGTA-213ENST00000560127 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
RABGGTA-213ENST00000560127 FAM240AA0A1B0GVK7 77 aa5.79□□□□□ -1.48
RABGGTA-213ENST00000560127 Q5VV11 94 aa5.79□□□□□ -1.48
RABGGTA-213ENST00000560127 IGKV2D-30A0A075B6S6 120 aa5.77□□□□□ -1.49
RABGGTA-213ENST00000560127 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
RABGGTA-213ENST00000560127 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
RABGGTA-213ENST00000560127 C7orf65Q6ZTY9 151 aa5.75□□□□□ -1.49
RABGGTA-213ENST00000560127 ACYP1P07311 99 aa5.74□□□□□ -1.49
RABGGTA-213ENST00000560127 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
RABGGTA-213ENST00000560127 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
RABGGTA-213ENST00000560127 SPRR2EP22531 72 aa5.72□□□□□ -1.49
RABGGTA-213ENST00000560127 SPRR2BP35325 72 aa5.72□□□□□ -1.49
RABGGTA-213ENST00000560127 SPRR2AP35326 72 aa5.72□□□□□ -1.49
RABGGTA-213ENST00000560127 SPRR2GQ9BYE4 73 aa5.71□□□□□ -1.5
RABGGTA-213ENST00000560127 ATP5EP2Q5VTU8 51 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms