RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 LINC00304Q8N9R0 145 aa11.7□□□□□ -0.54
PSEN1-225ENST00000560005 BPY2O14599 106 aa11.69□□□□□ -0.54
PSEN1-225ENST00000560005 HRCT1Q6UXD1 115 aa11.67□□□□□ -0.54
PSEN1-225ENST00000560005 IGKV3D-7A0A0C4DH55 119 aa11.66□□□□□ -0.54
PSEN1-225ENST00000560005 SPAG11AQ6PDA7 123 aa11.66□□□□□ -0.54
PSEN1-225ENST00000560005 J3KT08 172 aa11.64□□□□□ -0.55
PSEN1-225ENST00000560005 Q5XG85 94 aa11.63□□□□□ -0.55
PSEN1-225ENST00000560005 SPINK1P00995 79 aa11.62□□□□□ -0.55
PSEN1-225ENST00000560005 LIMD2Q9BT23 127 aa11.62□□□□□ -0.55
PSEN1-225ENST00000560005 ASB16-AS1Q495Z4 193 aa11.61□□□□□ -0.55
PSEN1-225ENST00000560005 LINC00472Q9H8W2 130 aa11.6□□□□□ -0.55
PSEN1-225ENST00000560005 SCGB1A1P11684 91 aa11.59□□□□□ -0.55
PSEN1-225ENST00000560005 RPS29P62273 56 aaKnown RBP11.59□□□□□ -0.55
PSEN1-225ENST00000560005 HIST1H4AP62805 103 aaKnown RBP11.57□□□□□ -0.56
PSEN1-225ENST00000560005 KRTAP4-1Q9BYQ7 146 aa11.54□□□□□ -0.56
PSEN1-225ENST00000560005 NDUFB1O75438 58 aa11.53□□□□□ -0.56
PSEN1-225ENST00000560005 DSCR10P59022 87 aa11.51□□□□□ -0.57
PSEN1-225ENST00000560005 IGKV4-1P06312 121 aa11.5□□□□□ -0.57
PSEN1-225ENST00000560005 A8MWP4 228 aa11.49□□□□□ -0.57
PSEN1-225ENST00000560005 Q96NJ1 140 aa11.49□□□□□ -0.57
PSEN1-225ENST00000560005 DEFB116Q30KQ4 102 aa11.48□□□□□ -0.57
PSEN1-225ENST00000560005 KRTAP13-3Q3SY46 172 aa11.47□□□□□ -0.57
PSEN1-225ENST00000560005 FP248Q71RG6 208 aaPredicted RBP11.47□□□□□ -0.57
PSEN1-225ENST00000560005 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
PSEN1-225ENST00000560005 SEC61BP60468 96 aaKnown RBP11.43□□□□□ -0.58
PSEN1-225ENST00000560005 K7EQZ3 153 aa11.42□□□□□ -0.58
PSEN1-225ENST00000560005 A0A087WVE0 104 aa11.41□□□□□ -0.58
PSEN1-225ENST00000560005 FAM236AA0A1B0GUQ0 79 aa11.41□□□□□ -0.58
PSEN1-225ENST00000560005 FAM236BA0A1B0GV22 79 aa11.41□□□□□ -0.58
PSEN1-225ENST00000560005 C1orf195Q5TG92 126 aa11.41□□□□□ -0.58
PSEN1-225ENST00000560005 Q8N9L7 120 aa11.41□□□□□ -0.58
PSEN1-225ENST00000560005 A0A1B0GVX0 72 aa11.37□□□□□ -0.59
PSEN1-225ENST00000560005 ATOX1O00244 68 aa11.37□□□□□ -0.59
PSEN1-225ENST00000560005 HCG22E2RYF7 251 aa11.36□□□□□ -0.59
PSEN1-225ENST00000560005 LCE2CQ5TA81 110 aa11.36□□□□□ -0.59
PSEN1-225ENST00000560005 SMIM20Q8N5G0 67 aa11.34□□□□□ -0.59
PSEN1-225ENST00000560005 C8orf87E5RJ46 101 aa11.33□□□□□ -0.6
PSEN1-225ENST00000560005 IGHV6-1A0A0B4J1U7 121 aa11.31□□□□□ -0.6
PSEN1-225ENST00000560005 C8orf17Q9NRJ1 99 aa11.29□□□□□ -0.6
PSEN1-225ENST00000560005 CASC2Q6XLA1 102 aa11.28□□□□□ -0.6
PSEN1-225ENST00000560005 MT1HP80294 61 aa11.27□□□□□ -0.61
PSEN1-225ENST00000560005 ANAPC13Q9BS18 74 aa11.27□□□□□ -0.61
PSEN1-225ENST00000560005 KRTAP19-2Q3LHN2 52 aa11.26□□□□□ -0.61
PSEN1-225ENST00000560005 MMP24-AS1A0A0U1RRL7 71 aa11.25□□□□□ -0.61
PSEN1-225ENST00000560005 hDV103S1A0JD37 113 aa11.25□□□□□ -0.61
PSEN1-225ENST00000560005 LINC00313P59037 77 aa11.24□□□□□ -0.61
PSEN1-225ENST00000560005 WFDC13Q8IUB5 93 aa11.24□□□□□ -0.61
PSEN1-225ENST00000560005 XP32Q5T750 250 aa11.22□□□□□ -0.61
PSEN1-225ENST00000560005 TMEM254Q8TBM7 123 aa11.22□□□□□ -0.61
PSEN1-225ENST00000560005 TRAV7A0A075B6U4 112 aa11.2□□□□□ -0.62
PSEN1-225ENST00000560005 SERP2Q8N6R1 65 aa11.2□□□□□ -0.62
PSEN1-225ENST00000560005 PCP4P48539 62 aa11.19□□□□□ -0.62
PSEN1-225ENST00000560005 LORP23490 312 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-225ENST00000560005 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
PSEN1-225ENST00000560005 KRTAP10-6P60371 365 aaPredicted RBP11.15□□□□□ -0.62
PSEN1-225ENST00000560005 TP53AIP1Q9HCN2 124 aa11.15□□□□□ -0.62
PSEN1-225ENST00000560005 OCR1Q9BZK8 76 aa11.14□□□□□ -0.63
PSEN1-225ENST00000560005 COX7CP15954 63 aa11.12□□□□□ -0.63
PSEN1-225ENST00000560005 NOTCH2NLQ7Z3S9 236 aa11.12□□□□□ -0.63
PSEN1-225ENST00000560005 UQCRQO14949 82 aa11.11□□□□□ -0.63
PSEN1-225ENST00000560005 KRTAP9-7A8MTY7 169 aa11.07□□□□□ -0.64
PSEN1-225ENST00000560005 NDUFS5O43920 106 aa11.07□□□□□ -0.64
PSEN1-225ENST00000560005 C5orf47Q569G3 176 aa11.07□□□□□ -0.64
PSEN1-225ENST00000560005 PCOTHQ58A44 107 aa11.07□□□□□ -0.64
PSEN1-225ENST00000560005 Q8N9P0 234 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-225ENST00000560005 KRTAP16-1A8MUX0 517 aa11.02□□□□□ -0.65
PSEN1-225ENST00000560005 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-225ENST00000560005 M0R2T5 61 aa11.02□□□□□ -0.65
PSEN1-225ENST00000560005 MP68P56378 58 aa11□□□□□ -0.65
PSEN1-225ENST00000560005 FLGP20930 4061 aaPredicted RBP11□□□□□ -0.65
PSEN1-225ENST00000560005 H3BPC8 53 aa10.98□□□□□ -0.65
PSEN1-225ENST00000560005 TRAV22A0A0B4J277 110 aa10.95□□□□□ -0.66
PSEN1-225ENST00000560005 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
PSEN1-225ENST00000560005 CCDC179H3BU77 68 aa10.93□□□□□ -0.66
PSEN1-225ENST00000560005 H0Y9P7 68 aa10.92□□□□□ -0.66
PSEN1-225ENST00000560005 C20orf197Q8N268 126 aa10.92□□□□□ -0.66
PSEN1-225ENST00000560005 C20orf166-AS1Q96NR2 134 aa10.92□□□□□ -0.66
PSEN1-225ENST00000560005 A8MUU9 505 aa10.9□□□□□ -0.66
PSEN1-225ENST00000560005 KLKP1Q107X0 134 aa10.9□□□□□ -0.66
PSEN1-225ENST00000560005 SSPOA2VEC9 5147 aa10.89□□□□□ -0.67
PSEN1-225ENST00000560005 USH2AO75445 5202 aa10.87□□□□□ -0.67
PSEN1-225ENST00000560005 COX6B2Q6YFQ2 88 aa10.87□□□□□ -0.67
PSEN1-225ENST00000560005 NDUFC1O43677 76 aa10.86□□□□□ -0.67
PSEN1-225ENST00000560005 Q75L30 129 aa10.86□□□□□ -0.67
PSEN1-225ENST00000560005 LINC00208Q96KT6 92 aa10.84□□□□□ -0.67
PSEN1-225ENST00000560005 C1orf64Q8NEQ6 169 aa10.82□□□□□ -0.68
PSEN1-225ENST00000560005 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
PSEN1-225ENST00000560005 ZCCHC13Q8WW36 166 aaKnown RBP10.81□□□□□ -0.68
PSEN1-225ENST00000560005 Q5W150 140 aa10.8□□□□□ -0.68
PSEN1-225ENST00000560005 SNURFQ9Y675 71 aa10.8□□□□□ -0.68
PSEN1-225ENST00000560005 ATP11AUNQ6ZP68 121 aa10.75□□□□□ -0.69
PSEN1-225ENST00000560005 RPL37P61927 97 aaKnown RBP10.74□□□□□ -0.69
PSEN1-225ENST00000560005 IGKV2-30P06310 120 aa10.69□□□□□ -0.7
PSEN1-225ENST00000560005 FCGBPQ9Y6R7 5405 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-225ENST00000560005 H7BZZ5 65 aa10.68□□□□□ -0.7
PSEN1-225ENST00000560005 TMEM258P61165 79 aa10.67□□□□□ -0.7
PSEN1-225ENST00000560005 CYP4F30PQ9H0H9 118 aa10.67□□□□□ -0.7
PSEN1-225ENST00000560005 CYSTM1Q9H1C7 97 aa10.65□□□□□ -0.7
PSEN1-225ENST00000560005 C7orf65Q6ZTY9 151 aa10.64□□□□□ -0.71
PSEN1-225ENST00000560005 IGKV2D-30A0A075B6S6 120 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms