RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 TEN1Q86WV5 123 aa5.03□□□□□ -1.6
HMG20A-209ENST00000559728 LIMD2Q9BT23 127 aa5.03□□□□□ -1.6
HMG20A-209ENST00000559728 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
HMG20A-209ENST00000559728 RBM3P98179 157 aaKnown RBP5.02□□□□□ -1.61
HMG20A-209ENST00000559728 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
HMG20A-209ENST00000559728 H3BT86 120 aa5.01□□□□□ -1.61
HMG20A-209ENST00000559728 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
HMG20A-209ENST00000559728 A0A087WSZ3 146 aa5□□□□□ -1.61
HMG20A-209ENST00000559728 Q96NJ1 140 aa5□□□□□ -1.61
HMG20A-209ENST00000559728 LOC110117498A0A087WWA1 95 aa4.99□□□□□ -1.61
HMG20A-209ENST00000559728 JMJD7-PLA2G4BH0Y9G9 81 aa4.99□□□□□ -1.61
HMG20A-209ENST00000559728 CCKP06307 115 aa4.99□□□□□ -1.61
HMG20A-209ENST00000559728 Q6ZQT0 140 aa4.99□□□□□ -1.61
HMG20A-209ENST00000559728 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
HMG20A-209ENST00000559728 DSCR8Q96T75 97 aa4.97□□□□□ -1.61
HMG20A-209ENST00000559728 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
HMG20A-209ENST00000559728 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
HMG20A-209ENST00000559728 MUC2Q02817 5179 aa4.95□□□□□ -1.62
HMG20A-209ENST00000559728 SS18L2Q9UHA2 77 aa4.94□□□□□ -1.62
HMG20A-209ENST00000559728 PDE6GP18545 87 aa4.93□□□□□ -1.62
HMG20A-209ENST00000559728 GTF2H5Q6ZYL4 71 aa4.93□□□□□ -1.62
HMG20A-209ENST00000559728 VPS25Q9BRG1 176 aa4.93□□□□□ -1.62
HMG20A-209ENST00000559728 F8W1H4 67 aa4.92□□□□□ -1.62
HMG20A-209ENST00000559728 A0A1B0GV90 55 aa4.91□□□□□ -1.62
HMG20A-209ENST00000559728 C9orf92A6NGG3 77 aa4.91□□□□□ -1.62
HMG20A-209ENST00000559728 DEFB116Q30KQ4 102 aa4.91□□□□□ -1.62
HMG20A-209ENST00000559728 A0A1B0GW54 56 aa4.9□□□□□ -1.63
HMG20A-209ENST00000559728 IGKV4-1P06312 121 aa4.88□□□□□ -1.63
HMG20A-209ENST00000559728 ETDBQ3ZM63 59 aa4.88□□□□□ -1.63
HMG20A-209ENST00000559728 NOTCH2NLQ7Z3S9 236 aa4.88□□□□□ -1.63
HMG20A-209ENST00000559728 KRTAP4-1Q9BYQ7 146 aa4.87□□□□□ -1.63
HMG20A-209ENST00000559728 KRTAP16-1A8MUX0 517 aa4.86□□□□□ -1.63
HMG20A-209ENST00000559728 DSCR10P59022 87 aa4.85□□□□□ -1.63
HMG20A-209ENST00000559728 SIGMAR1Q99720 223 aa4.85□□□□□ -1.63
HMG20A-209ENST00000559728 RPL37P61927 97 aaKnown RBP4.84□□□□□ -1.63
HMG20A-209ENST00000559728 LINC00846Q9NV44 126 aa4.84□□□□□ -1.63
HMG20A-209ENST00000559728 FAT4Q6V0I7 4981 aa4.83□□□□□ -1.64
HMG20A-209ENST00000559728 IGKV3D-7A0A0C4DH55 119 aa4.83□□□□□ -1.64
HMG20A-209ENST00000559728 NREPQ16612 68 aa4.83□□□□□ -1.64
HMG20A-209ENST00000559728 Q6ZVQ6 151 aa4.83□□□□□ -1.64
HMG20A-209ENST00000559728 A0A1B0GVX0 72 aa4.82□□□□□ -1.64
HMG20A-209ENST00000559728 J3KT08 172 aa4.82□□□□□ -1.64
HMG20A-209ENST00000559728 C20orf166-AS1Q96NR2 134 aa4.82□□□□□ -1.64
HMG20A-209ENST00000559728 IGHV6-1A0A0B4J1U7 121 aa4.81□□□□□ -1.64
HMG20A-209ENST00000559728 A8MUU9 505 aa4.81□□□□□ -1.64
HMG20A-209ENST00000559728 A8MWP4 228 aa4.81□□□□□ -1.64
HMG20A-209ENST00000559728 PCOTHQ58A44 107 aa4.81□□□□□ -1.64
HMG20A-209ENST00000559728 LINC00313P59037 77 aa4.8□□□□□ -1.64
HMG20A-209ENST00000559728 SEC61BP60468 96 aaKnown RBP4.8□□□□□ -1.64
HMG20A-209ENST00000559728 Q75L30 129 aa4.8□□□□□ -1.64
HMG20A-209ENST00000559728 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
HMG20A-209ENST00000559728 C8orf87E5RJ46 101 aa4.78□□□□□ -1.64
HMG20A-209ENST00000559728 K7EQZ3 153 aa4.78□□□□□ -1.64
HMG20A-209ENST00000559728 C8orf17Q9NRJ1 99 aa4.77□□□□□ -1.65
HMG20A-209ENST00000559728 MMP24-AS1A0A0U1RRL7 71 aa4.76□□□□□ -1.65
HMG20A-209ENST00000559728 BPY2O14599 106 aa4.76□□□□□ -1.65
HMG20A-209ENST00000559728 Q8N9L7 120 aa4.76□□□□□ -1.65
HMG20A-209ENST00000559728 KRTAP19-2Q3LHN2 52 aa4.75□□□□□ -1.65
HMG20A-209ENST00000559728 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
HMG20A-209ENST00000559728 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
HMG20A-209ENST00000559728 FAM240AA0A1B0GVK7 77 aa4.74□□□□□ -1.65
HMG20A-209ENST00000559728 NDUFB1O75438 58 aa4.74□□□□□ -1.65
HMG20A-209ENST00000559728 ACYP1P07311 99 aa4.71□□□□□ -1.66
HMG20A-209ENST00000559728 ATP11AUNQ6ZP68 121 aa4.71□□□□□ -1.66
HMG20A-209ENST00000559728 TMEM254Q8TBM7 123 aa4.7□□□□□ -1.66
HMG20A-209ENST00000559728 CXCL6P80162 114 aa4.69□□□□□ -1.66
HMG20A-209ENST00000559728 MRPL34Q9BQ48 92 aaKnown RBP4.69□□□□□ -1.66
HMG20A-209ENST00000559728 hDV103S1A0JD37 113 aa4.68□□□□□ -1.66
HMG20A-209ENST00000559728 WFDC13Q8IUB5 93 aa4.67□□□□□ -1.66
HMG20A-209ENST00000559728 ZCCHC13Q8WW36 166 aaKnown RBP4.67□□□□□ -1.66
HMG20A-209ENST00000559728 HCG22E2RYF7 251 aa4.65□□□□□ -1.67
HMG20A-209ENST00000559728 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
HMG20A-209ENST00000559728 ATP5EP2Q5VTU8 51 aa4.63□□□□□ -1.67
HMG20A-209ENST00000559728 Q5W150 140 aa4.63□□□□□ -1.67
HMG20A-209ENST00000559728 LINC00643Q86TS7 51 aa4.63□□□□□ -1.67
HMG20A-209ENST00000559728 MPLKIPQ8TAP9 179 aa4.63□□□□□ -1.67
HMG20A-209ENST00000559728 HRES1P13985 223 aa4.62□□□□□ -1.67
HMG20A-209ENST00000559728 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
HMG20A-209ENST00000559728 PCP4P48539 62 aa4.61□□□□□ -1.67
HMG20A-209ENST00000559728 A0A087WVE0 104 aa4.59□□□□□ -1.67
HMG20A-209ENST00000559728 A0A0U1RQV1 116 aa4.59□□□□□ -1.67
HMG20A-209ENST00000559728 J3QR89 54 aa4.59□□□□□ -1.67
HMG20A-209ENST00000559728 SPINK7P58062 85 aa4.59□□□□□ -1.67
HMG20A-209ENST00000559728 MT1HP80294 61 aa4.59□□□□□ -1.67
HMG20A-209ENST00000559728 NDUFS5O43920 106 aa4.58□□□□□ -1.68
HMG20A-209ENST00000559728 HIST1H4AP62805 103 aaKnown RBP4.56□□□□□ -1.68
HMG20A-209ENST00000559728 K7ERU9 68 aa4.54□□□□□ -1.68
HMG20A-209ENST00000559728 MT-ATP8P03928 68 aa4.53□□□□□ -1.68
HMG20A-209ENST00000559728 TP53AIP1Q9HCN2 124 aa4.52□□□□□ -1.69
HMG20A-209ENST00000559728 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
HMG20A-209ENST00000559728 IGKV2D-30A0A075B6S6 120 aa4.5□□□□□ -1.69
HMG20A-209ENST00000559728 COX6B2Q6YFQ2 88 aa4.5□□□□□ -1.69
HMG20A-209ENST00000559728 C7orf65Q6ZTY9 151 aa4.49□□□□□ -1.69
HMG20A-209ENST00000559728 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
HMG20A-209ENST00000559728 KRTAP5-3Q6L8H2 238 aa4.48□□□□□ -1.69
HMG20A-209ENST00000559728 IMUPQ9GZP8 106 aa4.47□□□□□ -1.69
HMG20A-209ENST00000559728 RBM12B-AS1Q9P1G2 102 aa4.47□□□□□ -1.69
HMG20A-209ENST00000559728 TRAV22A0A0B4J277 110 aa4.46□□□□□ -1.7
HMG20A-209ENST00000559728 UQCRQO14949 82 aa4.46□□□□□ -1.7
HMG20A-209ENST00000559728 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms