RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 LINC00313P59037 77 aa10.83□□□□□ -0.68
TSPAN3-207ENST00000559494 NOTCH2NLQ7Z3S9 236 aa10.83□□□□□ -0.68
TSPAN3-207ENST00000559494 J3KT08 172 aa10.82□□□□□ -0.68
TSPAN3-207ENST00000559494 Q75L30 129 aa10.82□□□□□ -0.68
TSPAN3-207ENST00000559494 IGHV6-1A0A0B4J1U7 121 aa10.8□□□□□ -0.68
TSPAN3-207ENST00000559494 FAT4Q6V0I7 4981 aa10.79□□□□□ -0.68
TSPAN3-207ENST00000559494 NREPQ16612 68 aa10.79□□□□□ -0.68
TSPAN3-207ENST00000559494 C20orf166-AS1Q96NR2 134 aa10.79□□□□□ -0.68
TSPAN3-207ENST00000559494 A0A1B0GVX0 72 aa10.78□□□□□ -0.68
TSPAN3-207ENST00000559494 A8MUU9 505 aa10.77□□□□□ -0.69
TSPAN3-207ENST00000559494 KRTAP16-1A8MUX0 517 aa10.77□□□□□ -0.69
TSPAN3-207ENST00000559494 A0A0U1RQV1 116 aa10.73□□□□□ -0.69
TSPAN3-207ENST00000559494 C8orf87E5RJ46 101 aa10.72□□□□□ -0.69
TSPAN3-207ENST00000559494 ATP11AUNQ6ZP68 121 aa10.72□□□□□ -0.69
TSPAN3-207ENST00000559494 LINC00846Q9NV44 126 aa10.72□□□□□ -0.69
TSPAN3-207ENST00000559494 A8MWP4 228 aa10.71□□□□□ -0.69
TSPAN3-207ENST00000559494 NDUFB1O75438 58 aa10.71□□□□□ -0.69
TSPAN3-207ENST00000559494 Q6ZVQ6 151 aa10.71□□□□□ -0.69
TSPAN3-207ENST00000559494 IGKV3D-7A0A0C4DH55 119 aa10.7□□□□□ -0.7
TSPAN3-207ENST00000559494 PRR15Q8IV56 129 aa10.65□□□□□ -0.7
TSPAN3-207ENST00000559494 C8orf17Q9NRJ1 99 aa10.64□□□□□ -0.71
TSPAN3-207ENST00000559494 BPY2O14599 106 aa10.63□□□□□ -0.71
TSPAN3-207ENST00000559494 UBL5Q9BZL1 73 aa10.62□□□□□ -0.71
TSPAN3-207ENST00000559494 K7EQZ3 153 aa10.58□□□□□ -0.71
TSPAN3-207ENST00000559494 KRTAP19-2Q3LHN2 52 aa10.58□□□□□ -0.71
TSPAN3-207ENST00000559494 LCE2AQ5TA79 106 aaPredicted RBP10.56□□□□□ -0.72
TSPAN3-207ENST00000559494 LCE2CQ5TA81 110 aa10.56□□□□□ -0.72
TSPAN3-207ENST00000559494 Q8N9L7 120 aa10.56□□□□□ -0.72
TSPAN3-207ENST00000559494 Q8N9P0 234 aaPredicted RBP10.56□□□□□ -0.72
TSPAN3-207ENST00000559494 MMP24-AS1A0A0U1RRL7 71 aa10.55□□□□□ -0.72
TSPAN3-207ENST00000559494 FAM240AA0A1B0GVK7 77 aa10.54□□□□□ -0.72
TSPAN3-207ENST00000559494 ACYP1P07311 99 aa10.54□□□□□ -0.72
TSPAN3-207ENST00000559494 KRTAP9-2Q9BYQ4 174 aa10.54□□□□□ -0.72
TSPAN3-207ENST00000559494 TMEM254Q8TBM7 123 aa10.49□□□□□ -0.73
TSPAN3-207ENST00000559494 hDV103S1A0JD37 113 aa10.47□□□□□ -0.73
TSPAN3-207ENST00000559494 ZCCHC13Q8WW36 166 aaKnown RBP10.47□□□□□ -0.73
TSPAN3-207ENST00000559494 MRPL34Q9BQ48 92 aaKnown RBP10.47□□□□□ -0.73
TSPAN3-207ENST00000559494 CXCL6P80162 114 aa10.44□□□□□ -0.74
TSPAN3-207ENST00000559494 WFDC13Q8IUB5 93 aa10.41□□□□□ -0.74
TSPAN3-207ENST00000559494 J3QR89 54 aa10.38□□□□□ -0.75
TSPAN3-207ENST00000559494 CASC2Q6XLA1 102 aa10.38□□□□□ -0.75
TSPAN3-207ENST00000559494 KRTAP9-6A0A140TA67 174 aa10.37□□□□□ -0.75
TSPAN3-207ENST00000559494 COX6B2Q6YFQ2 88 aa10.37□□□□□ -0.75
TSPAN3-207ENST00000559494 FLGP20930 4061 aaPredicted RBP10.37□□□□□ -0.75
TSPAN3-207ENST00000559494 MT1HP80294 61 aa10.36□□□□□ -0.75
TSPAN3-207ENST00000559494 NDUFS5O43920 106 aa10.35□□□□□ -0.75
TSPAN3-207ENST00000559494 HCG22E2RYF7 251 aa10.34□□□□□ -0.75
TSPAN3-207ENST00000559494 HRES1P13985 223 aa10.33□□□□□ -0.76
TSPAN3-207ENST00000559494 ATP5EP2Q5VTU8 51 aa10.33□□□□□ -0.76
TSPAN3-207ENST00000559494 LINC00643Q86TS7 51 aa10.33□□□□□ -0.76
TSPAN3-207ENST00000559494 SPINK7P58062 85 aa10.33□□□□□ -0.76
TSPAN3-207ENST00000559494 MPLKIPQ8TAP9 179 aa10.29□□□□□ -0.76
TSPAN3-207ENST00000559494 Q5W150 140 aa10.28□□□□□ -0.76
TSPAN3-207ENST00000559494 HIST1H4AP62805 103 aaKnown RBP10.25□□□□□ -0.77
TSPAN3-207ENST00000559494 K7ERU9 68 aa10.23□□□□□ -0.77
TSPAN3-207ENST00000559494 RBM12B-AS1Q9P1G2 102 aa10.22□□□□□ -0.77
TSPAN3-207ENST00000559494 A0A087WVE0 104 aa10.2□□□□□ -0.78
TSPAN3-207ENST00000559494 FAM236DA0A1B0GTK5 79 aa10.18□□□□□ -0.78
TSPAN3-207ENST00000559494 FAM236CP0DP71 79 aa10.18□□□□□ -0.78
TSPAN3-207ENST00000559494 M0R2T5 61 aa10.16□□□□□ -0.78
TSPAN3-207ENST00000559494 IGKV2D-30A0A075B6S6 120 aa10.12□□□□□ -0.79
TSPAN3-207ENST00000559494 IGKV2-30P06310 120 aa10.12□□□□□ -0.79
TSPAN3-207ENST00000559494 KRTAP10-6P60371 365 aaPredicted RBP10.11□□□□□ -0.79
TSPAN3-207ENST00000559494 TP53AIP1Q9HCN2 124 aa10.1□□□□□ -0.79
TSPAN3-207ENST00000559494 C7orf65Q6ZTY9 151 aa10.09□□□□□ -0.79
TSPAN3-207ENST00000559494 MT-ATP8P03928 68 aa10.08□□□□□ -0.8
TSPAN3-207ENST00000559494 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
TSPAN3-207ENST00000559494 IMUPQ9GZP8 106 aa9.98□□□□□ -0.81
TSPAN3-207ENST00000559494 UQCRQO14949 82 aa9.95□□□□□ -0.82
TSPAN3-207ENST00000559494 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
TSPAN3-207ENST00000559494 C4orf26Q17RF5 130 aa9.93□□□□□ -0.82
TSPAN3-207ENST00000559494 OCR1Q9BZK8 76 aa9.93□□□□□ -0.82
TSPAN3-207ENST00000559494 H1FX-AS1Q4G0G2 97 aa9.91□□□□□ -0.82
TSPAN3-207ENST00000559494 H0Y9P7 68 aa9.88□□□□□ -0.83
TSPAN3-207ENST00000559494 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
TSPAN3-207ENST00000559494 KRTAP9-8Q9BYQ0 159 aa9.88□□□□□ -0.83
TSPAN3-207ENST00000559494 CYP4F30PQ9H0H9 118 aa9.88□□□□□ -0.83
TSPAN3-207ENST00000559494 SCGB1A1P11684 91 aa9.87□□□□□ -0.83
TSPAN3-207ENST00000559494 FSIP2Q5CZC0 6907 aa9.86□□□□□ -0.83
TSPAN3-207ENST00000559494 FAM236AA0A1B0GUQ0 79 aa9.84□□□□□ -0.83
TSPAN3-207ENST00000559494 FAM236BA0A1B0GV22 79 aa9.84□□□□□ -0.83
TSPAN3-207ENST00000559494 LOC101927531A0A1B0GV80 90 aa9.83□□□□□ -0.84
TSPAN3-207ENST00000559494 KRTAP3-1Q9BYR8 98 aa9.83□□□□□ -0.84
TSPAN3-207ENST00000559494 CRCT1Q9UGL9 99 aa9.82□□□□□ -0.84
TSPAN3-207ENST00000559494 ATOX1O00244 68 aa9.82□□□□□ -0.84
TSPAN3-207ENST00000559494 C1orf64Q8NEQ6 169 aa9.8□□□□□ -0.84
TSPAN3-207ENST00000559494 MT2AP02795 61 aa9.77□□□□□ -0.85
TSPAN3-207ENST00000559494 C5orf47Q569G3 176 aa9.77□□□□□ -0.85
TSPAN3-207ENST00000559494 LINC00208Q96KT6 92 aa9.77□□□□□ -0.85
TSPAN3-207ENST00000559494 MP68P56378 58 aa9.76□□□□□ -0.85
TSPAN3-207ENST00000559494 TRAV7A0A075B6U4 112 aa9.7□□□□□ -0.86
TSPAN3-207ENST00000559494 MT1FP04733 61 aa9.69□□□□□ -0.86
TSPAN3-207ENST00000559494 KLKP1Q107X0 134 aa9.69□□□□□ -0.86
TSPAN3-207ENST00000559494 SMIM20Q8N5G0 67 aa9.69□□□□□ -0.86
TSPAN3-207ENST00000559494 H3BPC8 53 aa9.66□□□□□ -0.86
TSPAN3-207ENST00000559494 KRTAP10-10P60014 251 aa9.65□□□□□ -0.86
TSPAN3-207ENST00000559494 S4R3F8 94 aa9.63□□□□□ -0.87
TSPAN3-207ENST00000559494 LCA10Q71F78 164 aa9.59□□□□□ -0.87
TSPAN3-207ENST00000559494 KRTAP9-3Q9BYQ3 159 aa9.56□□□□□ -0.88
TSPAN3-207ENST00000559494 SERP2Q8N6R1 65 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms