RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 KRTAP9-3Q9BYQ3 159 aa8.14□□□□□ -1.11
CDC42BPB-205ENST00000559245 ORMDL1Q9P0S3 153 aa8.14□□□□□ -1.11
CDC42BPB-205ENST00000559245 H3BT86 120 aa8.13□□□□□ -1.11
CDC42BPB-205ENST00000559245 KRTAP10-10P60014 251 aa8.12□□□□□ -1.11
CDC42BPB-205ENST00000559245 C9JAW5 83 aa8.11□□□□□ -1.11
CDC42BPB-205ENST00000559245 TMEM256-PLSCR3K7ERE1 68 aa8.11□□□□□ -1.11
CDC42BPB-205ENST00000559245 UBE2V1Q13404 147 aa8.11□□□□□ -1.11
CDC42BPB-205ENST00000559245 DSCR10P59022 87 aa8.1□□□□□ -1.11
CDC42BPB-205ENST00000559245 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.11
CDC42BPB-205ENST00000559245 BAALC-AS2P0C853 105 aa8.09□□□□□ -1.11
CDC42BPB-205ENST00000559245 SMCPP49901 116 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPB-205ENST00000559245 TEN1Q86WV5 123 aa8.08□□□□□ -1.12
CDC42BPB-205ENST00000559245 F8W1H4 67 aa8.07□□□□□ -1.12
CDC42BPB-205ENST00000559245 ANKRD29Q8N6D5 301 aa8.07□□□□□ -1.12
CDC42BPB-205ENST00000559245 MACF1Q9UPN3 7388 aaKnown RBP8.06□□□□□ -1.12
CDC42BPB-205ENST00000559245 A0A087WSZ3 146 aa8.06□□□□□ -1.12
CDC42BPB-205ENST00000559245 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
CDC42BPB-205ENST00000559245 MPLKIPQ8TAP9 179 aa8.05□□□□□ -1.12
CDC42BPB-205ENST00000559245 HRES1P13985 223 aa8.04□□□□□ -1.12
CDC42BPB-205ENST00000559245 NDUFV3P56181 108 aaKnown RBP8.04□□□□□ -1.12
CDC42BPB-205ENST00000559245 MTURNQ8N3F0 131 aa8.04□□□□□ -1.12
CDC42BPB-205ENST00000559245 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
CDC42BPB-205ENST00000559245 LINC00313P59037 77 aa8.01□□□□□ -1.13
CDC42BPB-205ENST00000559245 SIGMAR1Q99720 223 aa8.01□□□□□ -1.13
CDC42BPB-205ENST00000559245 LINC00846Q9NV44 126 aa8.01□□□□□ -1.13
CDC42BPB-205ENST00000559245 TRBV7-4A0A0J9YYF1 115 aa8□□□□□ -1.13
CDC42BPB-205ENST00000559245 JMJD7-PLA2G4BH0Y9G9 81 aa8□□□□□ -1.13
CDC42BPB-205ENST00000559245 KRTAP19-6Q3LI70 58 aa7.98□□□□□ -1.13
CDC42BPB-205ENST00000559245 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
CDC42BPB-205ENST00000559245 LOC110117498A0A087WWA1 95 aa7.96□□□□□ -1.14
CDC42BPB-205ENST00000559245 RBM3P98179 157 aaKnown RBP7.96□□□□□ -1.14
CDC42BPB-205ENST00000559245 C21orf62-AS1Q17RA5 79 aa7.96□□□□□ -1.14
CDC42BPB-205ENST00000559245 IGKV4-1P06312 121 aa7.94□□□□□ -1.14
CDC42BPB-205ENST00000559245 PDE6GP18545 87 aa7.94□□□□□ -1.14
CDC42BPB-205ENST00000559245 ETDBQ3ZM63 59 aa7.94□□□□□ -1.14
CDC42BPB-205ENST00000559245 A0A1W2PNM2 257 aa7.93□□□□□ -1.14
CDC42BPB-205ENST00000559245 Q6ZQT0 140 aa7.92□□□□□ -1.14
CDC42BPB-205ENST00000559245 DSCR8Q96T75 97 aa7.91□□□□□ -1.14
CDC42BPB-205ENST00000559245 A0A1B0GW54 56 aa7.9□□□□□ -1.14
CDC42BPB-205ENST00000559245 C14orf132Q9NPU4 83 aa7.9□□□□□ -1.14
CDC42BPB-205ENST00000559245 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
CDC42BPB-205ENST00000559245 CCKP06307 115 aa7.86□□□□□ -1.15
CDC42BPB-205ENST00000559245 IGHV6-1A0A0B4J1U7 121 aa7.85□□□□□ -1.15
CDC42BPB-205ENST00000559245 A0A1B0GV72 72 aa7.85□□□□□ -1.15
CDC42BPB-205ENST00000559245 KRTAP6-3Q3LI67 103 aa7.85□□□□□ -1.15
CDC42BPB-205ENST00000559245 LINC00472Q9H8W2 130 aa7.84□□□□□ -1.15
CDC42BPB-205ENST00000559245 FAM240AA0A1B0GVK7 77 aa7.82□□□□□ -1.16
CDC42BPB-205ENST00000559245 A8MWP4 228 aa7.81□□□□□ -1.16
CDC42BPB-205ENST00000559245 SPINK7P58062 85 aa7.79□□□□□ -1.16
CDC42BPB-205ENST00000559245 ZCCHC13Q8WW36 166 aaKnown RBP7.78□□□□□ -1.16
CDC42BPB-205ENST00000559245 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
CDC42BPB-205ENST00000559245 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPB-205ENST00000559245 ACYP1P07311 99 aa7.76□□□□□ -1.17
CDC42BPB-205ENST00000559245 A0A1B0GVX0 72 aa7.75□□□□□ -1.17
CDC42BPB-205ENST00000559245 VPS25Q9BRG1 176 aa7.74□□□□□ -1.17
CDC42BPB-205ENST00000559245 J3QR89 54 aa7.73□□□□□ -1.17
CDC42BPB-205ENST00000559245 WFDC13Q8IUB5 93 aa7.71□□□□□ -1.18
CDC42BPB-205ENST00000559245 K7ERU9 68 aa7.7□□□□□ -1.18
CDC42BPB-205ENST00000559245 Q6ZVQ6 151 aa7.68□□□□□ -1.18
CDC42BPB-205ENST00000559245 NREPQ16612 68 aa7.66□□□□□ -1.18
CDC42BPB-205ENST00000559245 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
CDC42BPB-205ENST00000559245 J3KT08 172 aa7.64□□□□□ -1.19
CDC42BPB-205ENST00000559245 ATP5EP2Q5VTU8 51 aa7.61□□□□□ -1.19
CDC42BPB-205ENST00000559245 CXCL6P80162 114 aa7.6□□□□□ -1.19
CDC42BPB-205ENST00000559245 LINC00643Q86TS7 51 aa7.6□□□□□ -1.19
CDC42BPB-205ENST00000559245 NDUFB1O75438 58 aa7.58□□□□□ -1.2
CDC42BPB-205ENST00000559245 BPY2O14599 106 aa7.57□□□□□ -1.2
CDC42BPB-205ENST00000559245 NEBP20929 6669 aa7.57□□□□□ -1.2
CDC42BPB-205ENST00000559245 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
CDC42BPB-205ENST00000559245 C8orf17Q9NRJ1 99 aa7.56□□□□□ -1.2
CDC42BPB-205ENST00000559245 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
CDC42BPB-205ENST00000559245 PRR15Q8IV56 129 aa7.53□□□□□ -1.2
CDC42BPB-205ENST00000559245 MUC12Q9UKN1 5478 aa7.53□□□□□ -1.2
CDC42BPB-205ENST00000559245 K7EQZ3 153 aa7.51□□□□□ -1.21
CDC42BPB-205ENST00000559245 A6NN06 94 aa7.47□□□□□ -1.21
CDC42BPB-205ENST00000559245 KRTAP20-1Q3LI63 56 aa7.47□□□□□ -1.21
CDC42BPB-205ENST00000559245 MMP24-AS1A0A0U1RRL7 71 aa7.46□□□□□ -1.22
CDC42BPB-205ENST00000559245 Q8N9L7 120 aa7.46□□□□□ -1.22
CDC42BPB-205ENST00000559245 IMUPQ9GZP8 106 aa7.46□□□□□ -1.22
CDC42BPB-205ENST00000559245 MT-ATP8P03928 68 aa7.44□□□□□ -1.22
CDC42BPB-205ENST00000559245 MRPL34Q9BQ48 92 aaKnown RBP7.41□□□□□ -1.22
CDC42BPB-205ENST00000559245 TMEM254Q8TBM7 123 aa7.4□□□□□ -1.22
CDC42BPB-205ENST00000559245 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
CDC42BPB-205ENST00000559245 MT1BP07438 61 aa7.39□□□□□ -1.23
CDC42BPB-205ENST00000559245 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
CDC42BPB-205ENST00000559245 hDV103S1A0JD37 113 aa7.37□□□□□ -1.23
CDC42BPB-205ENST00000559245 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
CDC42BPB-205ENST00000559245 A0A087WVE0 104 aa7.36□□□□□ -1.23
CDC42BPB-205ENST00000559245 NDUFS5O43920 106 aa7.36□□□□□ -1.23
CDC42BPB-205ENST00000559245 HIST1H4AP62805 103 aaKnown RBP7.35□□□□□ -1.23
CDC42BPB-205ENST00000559245 Q5VV11 94 aa7.35□□□□□ -1.23
CDC42BPB-205ENST00000559245 CASC2Q6XLA1 102 aa7.35□□□□□ -1.23
CDC42BPB-205ENST00000559245 FAM236AA0A1B0GUQ0 79 aa7.34□□□□□ -1.23
CDC42BPB-205ENST00000559245 FAM236BA0A1B0GV22 79 aa7.34□□□□□ -1.23
CDC42BPB-205ENST00000559245 C7orf65Q6ZTY9 151 aa7.33□□□□□ -1.24
CDC42BPB-205ENST00000559245 KRTAP5-9P26371 169 aa7.32□□□□□ -1.24
CDC42BPB-205ENST00000559245 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
CDC42BPB-205ENST00000559245 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
CDC42BPB-205ENST00000559245 C5orf47Q569G3 176 aa7.3□□□□□ -1.24
CDC42BPB-205ENST00000559245 Q5W150 140 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms