RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 WFDC10AQ9H1F0 79 aa2.79□□□□□ -1.96
CASC4-208ENST00000559151 LINC01558Q9Y6Z2 57 aa2.79□□□□□ -1.96
CASC4-208ENST00000559151 PKHD1P08F94 4074 aa2.79□□□□□ -1.96
CASC4-208ENST00000559151 HECTD4Q9Y4D8 3996 aa2.78□□□□□ -1.96
CASC4-208ENST00000559151 TOMM5Q8N4H5 51 aa2.78□□□□□ -1.96
CASC4-208ENST00000559151 KIAA1109Q2LD37 5005 aa2.77□□□□□ -1.97
CASC4-208ENST00000559151 LINC01549A6NIU2 74 aa2.77□□□□□ -1.97
CASC4-208ENST00000559151 M0R135 149 aa2.77□□□□□ -1.97
CASC4-208ENST00000559151 UQCR11O14957 56 aa2.77□□□□□ -1.97
CASC4-208ENST00000559151 RPL37AP61513 92 aaKnown RBP2.77□□□□□ -1.97
CASC4-208ENST00000559151 V9GYV3 84 aa2.77□□□□□ -1.97
CASC4-208ENST00000559151 DNAH10Q8IVF4 4471 aa2.77□□□□□ -1.97
CASC4-208ENST00000559151 CTXND1A0A1B0GTU2 59 aa2.76□□□□□ -1.97
CASC4-208ENST00000559151 A0A1B0GUT8 65 aa2.76□□□□□ -1.97
CASC4-208ENST00000559151 MGPP08493 103 aa2.76□□□□□ -1.97
CASC4-208ENST00000559151 ABCA13Q86UQ4 5058 aa2.75□□□□□ -1.97
CASC4-208ENST00000559151 DEFB107AQ8IZN7 70 aa2.75□□□□□ -1.97
CASC4-208ENST00000559151 HERC1Q15751 4861 aa2.75□□□□□ -1.97
CASC4-208ENST00000559151 NBDYA0A0U1RRE5 68 aa2.74□□□□□ -1.97
CASC4-208ENST00000559151 K7EIL1 84 aa2.74□□□□□ -1.97
CASC4-208ENST00000559151 IFI6P09912 130 aa2.74□□□□□ -1.97
CASC4-208ENST00000559151 ALMS1Q8TCU4 4167 aa2.74□□□□□ -1.97
CASC4-208ENST00000559151 PRH1P02810 166 aa2.73□□□□□ -1.97
CASC4-208ENST00000559151 FXYD3Q14802 87 aa2.73□□□□□ -1.97
CASC4-208ENST00000559151 LINC00846Q9NV44 126 aa2.73□□□□□ -1.97
CASC4-208ENST00000559151 KMT2AQ03164 3969 aa2.73□□□□□ -1.97
CASC4-208ENST00000559151 A0A087WTM6 91 aa2.72□□□□□ -1.97
CASC4-208ENST00000559151 ZNF137PP52743 207 aa2.72□□□□□ -1.97
CASC4-208ENST00000559151 WFDC6Q9BQY6 131 aa2.72□□□□□ -1.97
CASC4-208ENST00000559151 PLAC8Q9NZF1 115 aa2.72□□□□□ -1.97
CASC4-208ENST00000559151 VPS13DQ5THJ4 4388 aa2.72□□□□□ -1.97
CASC4-208ENST00000559151 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.97
CASC4-208ENST00000559151 H0Y9P7 68 aa2.71□□□□□ -1.98
CASC4-208ENST00000559151 NDUFB1O75438 58 aa2.71□□□□□ -1.98
CASC4-208ENST00000559151 DNAH6Q9C0G6 4158 aa2.7□□□□□ -1.98
CASC4-208ENST00000559151 DYNC1H1Q14204 4646 aaKnown RBP2.7□□□□□ -1.98
CASC4-208ENST00000559151 FAT2Q9NYQ8 4349 aa2.7□□□□□ -1.98
CASC4-208ENST00000559151 TRBV30A0A0K0K1B3 111 aa2.7□□□□□ -1.98
CASC4-208ENST00000559151 NREPQ16612 68 aa2.7□□□□□ -1.98
CASC4-208ENST00000559151 C5orf56Q8N8D9 126 aa2.7□□□□□ -1.98
CASC4-208ENST00000559151 TMEM263Q8WUH6 116 aaKnown RBP2.7□□□□□ -1.98
CASC4-208ENST00000559151 FCER1GP30273 86 aa2.69□□□□□ -1.98
CASC4-208ENST00000559151 LINC00208Q96KT6 92 aa2.69□□□□□ -1.98
CASC4-208ENST00000559151 SPRR4Q96PI1 79 aa2.69□□□□□ -1.98
CASC4-208ENST00000559151 NMES1Q9C002 83 aa2.69□□□□□ -1.98
CASC4-208ENST00000559151 DNAH2Q9P225 4427 aa2.69□□□□□ -1.98
CASC4-208ENST00000559151 TRAV1-2A0A0B4J238 106 aa2.68□□□□□ -1.98
CASC4-208ENST00000559151 SPINK7P58062 85 aa2.68□□□□□ -1.98
CASC4-208ENST00000559151 COX17Q14061 63 aa2.68□□□□□ -1.98
CASC4-208ENST00000559151 TRAV21A0A0B4J279 112 aa2.67□□□□□ -1.98
CASC4-208ENST00000559151 PRB3Q04118 309 aaPredicted RBP2.67□□□□□ -1.98
CASC4-208ENST00000559151 WFDC9Q8NEX5 89 aa2.67□□□□□ -1.98
CASC4-208ENST00000559151 SMIM4Q8WVI0 70 aa2.67□□□□□ -1.98
CASC4-208ENST00000559151 DNAH11Q96DT5 4516 aa2.67□□□□□ -1.98
CASC4-208ENST00000559151 HSPG2P98160 4391 aa2.66□□□□□ -1.98
CASC4-208ENST00000559151 FXYD4P59646 89 aa2.66□□□□□ -1.98
CASC4-208ENST00000559151 C10orf113Q5VZT2 155 aa2.66□□□□□ -1.98
CASC4-208ENST00000559151 SPATA8Q6RVD6 105 aa2.66□□□□□ -1.98
CASC4-208ENST00000559151 CMC2Q9NRP2 79 aa2.66□□□□□ -1.98
CASC4-208ENST00000559151 DNAH17Q9UFH2 4485 aa2.66□□□□□ -1.98
CASC4-208ENST00000559151 SRRM2Q9UQ35 2752 aaKnown RBP2.66□□□□□ -1.98
CASC4-208ENST00000559151 TRGV1A0A0A0MS02 117 aa2.65□□□□□ -1.99
CASC4-208ENST00000559151 Q96NJ1 140 aa2.65□□□□□ -1.99
CASC4-208ENST00000559151 PKD1P98161 4303 aa2.64□□□□□ -1.99
CASC4-208ENST00000559151 LYNX1G3V0Z9 82 aa2.63□□□□□ -1.99
CASC4-208ENST00000559151 DEFB108BQ8NET1 73 aa2.63□□□□□ -1.99
CASC4-208ENST00000559151 TRBV6-1A0A0K0K1D8 114 aa2.62□□□□□ -1.99
CASC4-208ENST00000559151 ACYP2P14621 99 aa2.62□□□□□ -1.99
CASC4-208ENST00000559151 ENHOQ6UWT2 76 aa2.62□□□□□ -1.99
CASC4-208ENST00000559151 LINC00472Q9H8W2 130 aa2.62□□□□□ -1.99
CASC4-208ENST00000559151 LY6G6CO95867 125 aa2.61□□□□□ -1.99
CASC4-208ENST00000559151 DEFB112Q30KQ8 113 aa2.61□□□□□ -1.99
CASC4-208ENST00000559151 GAFA1Q96PS6 74 aa2.61□□□□□ -1.99
CASC4-208ENST00000559151 UBL5Q9BZL1 73 aa2.61□□□□□ -1.99
CASC4-208ENST00000559151 TNCP24821 2201 aa2.61□□□□□ -1.99
CASC4-208ENST00000559151 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
CASC4-208ENST00000559151 DMBT1Q9UGM3 2413 aaPredicted RBP2.6□□□□□ -1.99
CASC4-208ENST00000559151 APOBP04114 4563 aaKnown RBP2.6□□□□□ -1.99
CASC4-208ENST00000559151 LRP1BQ9NZR2 4599 aa2.6□□□□□ -1.99
CASC4-208ENST00000559151 K7EMI3 77 aa2.6□□□□□ -1.99
CASC4-208ENST00000559151 MRPL33O75394 65 aaKnown RBP2.6□□□□□ -1.99
CASC4-208ENST00000559151 ABRACLQ9P1F3 81 aa2.6□□□□□ -1.99
CASC4-208ENST00000559151 CAV3P56539 151 aa2.59□□□□□ -1.99
CASC4-208ENST00000559151 Q6ZQY7 126 aa2.57□□□□□ -2
CASC4-208ENST00000559151 RPS27LQ71UM5 84 aaKnown RBP2.57□□□□□ -2
CASC4-208ENST00000559151 FAT1Q14517 4588 aa2.57□□□□□ -2
CASC4-208ENST00000559151 A0A1B0GU69 56 aa2.56□□□□□ -2
CASC4-208ENST00000559151 HMCN2Q8NDA2 5059 aa2.55□□□□□ -2
CASC4-208ENST00000559151 DNAH5Q8TE73 4624 aa2.55□□□□□ -2
CASC4-208ENST00000559151 NDUFA4O00483 81 aa2.54□□□□□ -2
CASC4-208ENST00000559151 PLNP26678 52 aa2.54□□□□□ -2
CASC4-208ENST00000559151 LINC00959A0A1B0GUT2 108 aa2.53□□□□□ -2
CASC4-208ENST00000559151 SMIM27A0A1W2PRY6 76 aa2.52□□□□□ -2.01
CASC4-208ENST00000559151 VPS13BQ7Z7G8 4022 aa2.51□□□□□ -2.01
CASC4-208ENST00000559151 M0R1W7 72 aa2.51□□□□□ -2.01
CASC4-208ENST00000559151 RPL38P63173 70 aaKnown RBP2.51□□□□□ -2.01
CASC4-208ENST00000559151 SERF2P84101 59 aa2.51□□□□□ -2.01
CASC4-208ENST00000559151 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.51□□□□□ -2.01
CASC4-208ENST00000559151 COX7BP24311 80 aa2.5□□□□□ -2.01
CASC4-208ENST00000559151 HAMPP81172 84 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms