RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 OXTP01178 125 aa9.35□□□□□ -0.91
CDC42BPB-204ENST00000559043 PRR15Q8IV56 129 aa9.34□□□□□ -0.91
CDC42BPB-204ENST00000559043 KRTAP29-1A8MX34 341 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPB-204ENST00000559043 SVIPQ8NHG7 77 aa9.33□□□□□ -0.92
CDC42BPB-204ENST00000559043 PCLOQ9Y6V0 5065 aa9.33□□□□□ -0.92
CDC42BPB-204ENST00000559043 A0A087X002 238 aa9.32□□□□□ -0.92
CDC42BPB-204ENST00000559043 ATP5EP56381 51 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPB-204ENST00000559043 FAT3Q8TDW7 4589 aa9.31□□□□□ -0.92
CDC42BPB-204ENST00000559043 C5orf47Q569G3 176 aa9.3□□□□□ -0.92
CDC42BPB-204ENST00000559043 WFDC13Q8IUB5 93 aa9.3□□□□□ -0.92
CDC42BPB-204ENST00000559043 SERP1Q9Y6X1 66 aa9.3□□□□□ -0.92
CDC42BPB-204ENST00000559043 Q96NJ1 140 aa9.3□□□□□ -0.92
CDC42BPB-204ENST00000559043 PRR26Q8N8Z3 221 aa9.29□□□□□ -0.92
CDC42BPB-204ENST00000559043 KRTAP13-2Q52LG2 175 aa9.28□□□□□ -0.92
CDC42BPB-204ENST00000559043 ZCCHC13Q8WW36 166 aaKnown RBP9.28□□□□□ -0.92
CDC42BPB-204ENST00000559043 MOBPQ13875 183 aa9.28□□□□□ -0.92
CDC42BPB-204ENST00000559043 CASC2Q6XLA1 102 aa9.27□□□□□ -0.93
CDC42BPB-204ENST00000559043 FAM229BQ4G0N7 80 aa9.25□□□□□ -0.93
CDC42BPB-204ENST00000559043 MT1HL1P0DM35 61 aa9.24□□□□□ -0.93
CDC42BPB-204ENST00000559043 KRTAP10-8P60410 259 aa9.24□□□□□ -0.93
CDC42BPB-204ENST00000559043 TNXBP22105 4242 aa9.24□□□□□ -0.93
CDC42BPB-204ENST00000559043 HRCT1Q6UXD1 115 aa9.23□□□□□ -0.93
CDC42BPB-204ENST00000559043 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
CDC42BPB-204ENST00000559043 NDUFB1O75438 58 aa9.23□□□□□ -0.93
CDC42BPB-204ENST00000559043 ASB16-AS1Q495Z4 193 aa9.19□□□□□ -0.94
CDC42BPB-204ENST00000559043 MP68P56378 58 aa9.17□□□□□ -0.94
CDC42BPB-204ENST00000559043 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
CDC42BPB-204ENST00000559043 TYMSOSQ8TAI1 123 aa9.17□□□□□ -0.94
CDC42BPB-204ENST00000559043 Q5XG85 94 aa9.16□□□□□ -0.94
CDC42BPB-204ENST00000559043 H3BPC8 53 aa9.15□□□□□ -0.94
CDC42BPB-204ENST00000559043 CD164Q04900 197 aa9.15□□□□□ -0.95
CDC42BPB-204ENST00000559043 A0A1B0GVX0 72 aa9.14□□□□□ -0.95
CDC42BPB-204ENST00000559043 SSBP3-AS1Q7Z2R9 100 aa9.14□□□□□ -0.95
CDC42BPB-204ENST00000559043 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
CDC42BPB-204ENST00000559043 DMBT1Q9UGM3 2413 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPB-204ENST00000559043 H0Y9P7 68 aa9.13□□□□□ -0.95
CDC42BPB-204ENST00000559043 SMIM26A0A096LP01 95 aa9.12□□□□□ -0.95
CDC42BPB-204ENST00000559043 TRAV22A0A0B4J277 110 aa9.12□□□□□ -0.95
CDC42BPB-204ENST00000559043 LINC00208Q96KT6 92 aa9.12□□□□□ -0.95
CDC42BPB-204ENST00000559043 IGHV6-1A0A0B4J1U7 121 aa9.09□□□□□ -0.95
CDC42BPB-204ENST00000559043 TP53AIP1Q9HCN2 124 aa9.09□□□□□ -0.95
CDC42BPB-204ENST00000559043 J3QL48 77 aa9.08□□□□□ -0.96
CDC42BPB-204ENST00000559043 CYP4F30PQ9H0H9 118 aa9.08□□□□□ -0.96
CDC42BPB-204ENST00000559043 FP248Q71RG6 208 aaPredicted RBP9.07□□□□□ -0.96
CDC42BPB-204ENST00000559043 C4orf26Q17RF5 130 aa9.06□□□□□ -0.96
CDC42BPB-204ENST00000559043 LINC00304Q8N9R0 145 aa9.06□□□□□ -0.96
CDC42BPB-204ENST00000559043 C1orf64Q8NEQ6 169 aa9.05□□□□□ -0.96
CDC42BPB-204ENST00000559043 MRPL34Q9BQ48 92 aaKnown RBP9.04□□□□□ -0.96
CDC42BPB-204ENST00000559043 NOTCH2NLQ7Z3S9 236 aa9.03□□□□□ -0.96
CDC42BPB-204ENST00000559043 SPANXA2-OT1Q8N9U9 137 aa9.03□□□□□ -0.96
CDC42BPB-204ENST00000559043 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
CDC42BPB-204ENST00000559043 SPAG11AQ6PDA7 123 aa8.98□□□□□ -0.97
CDC42BPB-204ENST00000559043 HERC1Q15751 4861 aa8.98□□□□□ -0.97
CDC42BPB-204ENST00000559043 SPINK1P00995 79 aa8.97□□□□□ -0.97
CDC42BPB-204ENST00000559043 PRR4Q16378 134 aa8.97□□□□□ -0.97
CDC42BPB-204ENST00000559043 NDUFS5O43920 106 aa8.97□□□□□ -0.97
CDC42BPB-204ENST00000559043 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
CDC42BPB-204ENST00000559043 C1orf195Q5TG92 126 aa8.93□□□□□ -0.98
CDC42BPB-204ENST00000559043 IGLV7-46A0A075B6I9 117 aa8.91□□□□□ -0.98
CDC42BPB-204ENST00000559043 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
CDC42BPB-204ENST00000559043 RETNLBQ9BQ08 111 aa8.91□□□□□ -0.98
CDC42BPB-204ENST00000559043 KRTAP13-3Q3SY46 172 aa8.9□□□□□ -0.99
CDC42BPB-204ENST00000559043 MPLKIPQ8TAP9 179 aa8.89□□□□□ -0.99
CDC42BPB-204ENST00000559043 LIMD2Q9BT23 127 aa8.89□□□□□ -0.99
CDC42BPB-204ENST00000559043 LINC00313P59037 77 aa8.88□□□□□ -0.99
CDC42BPB-204ENST00000559043 PCOTHQ58A44 107 aa8.86□□□□□ -0.99
CDC42BPB-204ENST00000559043 Q5W150 140 aa8.86□□□□□ -0.99
CDC42BPB-204ENST00000559043 Q1T7F1 81 aa8.85□□□□□ -0.99
CDC42BPB-204ENST00000559043 LOC101927531A0A1B0GV80 90 aa8.84□□□□□ -0.99
CDC42BPB-204ENST00000559043 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
CDC42BPB-204ENST00000559043 KRTAP16-1A8MUX0 517 aa8.81□□□□□ -1
CDC42BPB-204ENST00000559043 COA5Q86WW8 74 aa8.77□□□□□ -1.01
CDC42BPB-204ENST00000559043 HMCN2Q8NDA2 5059 aa8.75□□□□□ -1.01
CDC42BPB-204ENST00000559043 V9GYY9 64 aa8.75□□□□□ -1.01
CDC42BPB-204ENST00000559043 LPAP08519 4548 aa8.72□□□□□ -1.01
CDC42BPB-204ENST00000559043 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
CDC42BPB-204ENST00000559043 HRES1P13985 223 aa8.68□□□□□ -1.02
CDC42BPB-204ENST00000559043 PRO0628Q9UI54 55 aa8.68□□□□□ -1.02
CDC42BPB-204ENST00000559043 PSPHP1O15172 72 aa8.66□□□□□ -1.02
CDC42BPB-204ENST00000559043 A8MUN3 132 aa8.63□□□□□ -1.03
CDC42BPB-204ENST00000559043 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
CDC42BPB-204ENST00000559043 LRP2P98164 4655 aa8.63□□□□□ -1.03
CDC42BPB-204ENST00000559043 TPRXLQ17RH7 258 aa8.62□□□□□ -1.03
CDC42BPB-204ENST00000559043 C9orf92A6NGG3 77 aa8.62□□□□□ -1.03
CDC42BPB-204ENST00000559043 Q5VV11 94 aa8.61□□□□□ -1.03
CDC42BPB-204ENST00000559043 DMAC1Q96GE9 116 aa8.61□□□□□ -1.03
CDC42BPB-204ENST00000559043 ACYP2P14621 99 aa8.59□□□□□ -1.03
CDC42BPB-204ENST00000559043 LINC01558Q9Y6Z2 57 aa8.56□□□□□ -1.04
CDC42BPB-204ENST00000559043 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
CDC42BPB-204ENST00000559043 XP32Q5T750 250 aa8.53□□□□□ -1.04
CDC42BPB-204ENST00000559043 IGKV2D-30A0A075B6S6 120 aa8.53□□□□□ -1.04
CDC42BPB-204ENST00000559043 Q75L30 129 aa8.52□□□□□ -1.05
CDC42BPB-204ENST00000559043 C20orf166-AS1Q96NR2 134 aa8.49□□□□□ -1.05
CDC42BPB-204ENST00000559043 A8MUU9 505 aa8.48□□□□□ -1.05
CDC42BPB-204ENST00000559043 CHKB-CPT1BH3BT56 60 aa8.48□□□□□ -1.05
CDC42BPB-204ENST00000559043 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.05
CDC42BPB-204ENST00000559043 UBR4Q5T4S7 5183 aa8.45□□□□□ -1.06
CDC42BPB-204ENST00000559043 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
CDC42BPB-204ENST00000559043 A6NED7 52 aa8.37□□□□□ -1.07
CDC42BPB-204ENST00000559043 A8MU10 97 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 1572.1 ms