RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 A0A1B0GW54 56 aa6.44□□□□□ -1.38
CSPG4P5-201ENST00000558731 FLG2Q5D862 2391 aaPredicted RBP6.44□□□□□ -1.38
CSPG4P5-201ENST00000558731 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
CSPG4P5-201ENST00000558731 PCOTHQ58A44 107 aa6.43□□□□□ -1.38
CSPG4P5-201ENST00000558731 CASC2Q6XLA1 102 aa6.43□□□□□ -1.38
CSPG4P5-201ENST00000558731 Q6ZSA8 131 aa6.43□□□□□ -1.38
CSPG4P5-201ENST00000558731 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
CSPG4P5-201ENST00000558731 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
CSPG4P5-201ENST00000558731 DNAH8Q96JB1 4490 aa6.41□□□□□ -1.38
CSPG4P5-201ENST00000558731 LIMD2Q9BT23 127 aa6.4□□□□□ -1.38
CSPG4P5-201ENST00000558731 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.38
CSPG4P5-201ENST00000558731 CD164Q04900 197 aa6.4□□□□□ -1.38
CSPG4P5-201ENST00000558731 Q5VV11 94 aa6.39□□□□□ -1.39
CSPG4P5-201ENST00000558731 TYMSOSQ8TAI1 123 aa6.39□□□□□ -1.39
CSPG4P5-201ENST00000558731 ZCCHC13Q8WW36 166 aaKnown RBP6.39□□□□□ -1.39
CSPG4P5-201ENST00000558731 CYP4F30PQ9H0H9 118 aa6.39□□□□□ -1.39
CSPG4P5-201ENST00000558731 LRP1BQ9NZR2 4599 aa6.39□□□□□ -1.39
CSPG4P5-201ENST00000558731 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
CSPG4P5-201ENST00000558731 PKHD1P08F94 4074 aa6.39□□□□□ -1.39
CSPG4P5-201ENST00000558731 A8MWP4 228 aa6.39□□□□□ -1.39
CSPG4P5-201ENST00000558731 PRR26Q8N8Z3 221 aa6.38□□□□□ -1.39
CSPG4P5-201ENST00000558731 LINC00472Q9H8W2 130 aa6.38□□□□□ -1.39
CSPG4P5-201ENST00000558731 KMT2CQ8NEZ4 4911 aaKnown RBP6.38□□□□□ -1.39
CSPG4P5-201ENST00000558731 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
CSPG4P5-201ENST00000558731 DMBT1Q9UGM3 2413 aaPredicted RBP6.36□□□□□ -1.39
CSPG4P5-201ENST00000558731 Q8N9P0 234 aaPredicted RBP6.36□□□□□ -1.39
CSPG4P5-201ENST00000558731 KRTAP13-2Q52LG2 175 aa6.35□□□□□ -1.39
CSPG4P5-201ENST00000558731 SSBP3-AS1Q7Z2R9 100 aa6.35□□□□□ -1.39
CSPG4P5-201ENST00000558731 KTN1-AS1Q86SY8 53 aa6.35□□□□□ -1.39
CSPG4P5-201ENST00000558731 COA5Q86WW8 74 aa6.35□□□□□ -1.39
CSPG4P5-201ENST00000558731 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
CSPG4P5-201ENST00000558731 FAT2Q9NYQ8 4349 aa6.34□□□□□ -1.39
CSPG4P5-201ENST00000558731 RBM12B-AS1Q9P1G2 102 aa6.33□□□□□ -1.4
CSPG4P5-201ENST00000558731 FAT1Q14517 4588 aa6.32□□□□□ -1.4
CSPG4P5-201ENST00000558731 NOTCH2NLQ7Z3S9 236 aa6.31□□□□□ -1.4
CSPG4P5-201ENST00000558731 A0A1B0GVY2 172 aa6.3□□□□□ -1.4
CSPG4P5-201ENST00000558731 C8orf17Q9NRJ1 99 aa6.3□□□□□ -1.4
CSPG4P5-201ENST00000558731 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
CSPG4P5-201ENST00000558731 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
CSPG4P5-201ENST00000558731 DYNC1H1Q14204 4646 aaKnown RBP6.29□□□□□ -1.4
CSPG4P5-201ENST00000558731 Q96NJ1 140 aa6.29□□□□□ -1.4
CSPG4P5-201ENST00000558731 KRTAP1-4P0C5Y4 121 aa6.29□□□□□ -1.4
CSPG4P5-201ENST00000558731 FAM229AH3BQW9 127 aa6.29□□□□□ -1.4
CSPG4P5-201ENST00000558731 LCA10Q71F78 164 aa6.28□□□□□ -1.4
CSPG4P5-201ENST00000558731 MMP24-AS1A0A0U1RRL7 71 aa6.28□□□□□ -1.4
CSPG4P5-201ENST00000558731 SPANXA2-OT1Q8N9U9 137 aa6.28□□□□□ -1.4
CSPG4P5-201ENST00000558731 LOC101927531A0A1B0GV80 90 aa6.28□□□□□ -1.4
CSPG4P5-201ENST00000558731 VPS13BQ7Z7G8 4022 aa6.27□□□□□ -1.41
CSPG4P5-201ENST00000558731 H3BPC8 53 aa6.27□□□□□ -1.41
CSPG4P5-201ENST00000558731 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
CSPG4P5-201ENST00000558731 PKD1P98161 4303 aa6.27□□□□□ -1.41
CSPG4P5-201ENST00000558731 RYR2Q92736 4967 aa6.24□□□□□ -1.41
CSPG4P5-201ENST00000558731 Q75L30 129 aa6.24□□□□□ -1.41
CSPG4P5-201ENST00000558731 MRPL34Q9BQ48 92 aaKnown RBP6.23□□□□□ -1.41
CSPG4P5-201ENST00000558731 LINC00313P59037 77 aa6.23□□□□□ -1.41
CSPG4P5-201ENST00000558731 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
CSPG4P5-201ENST00000558731 Q5VSD8 79 aa6.23□□□□□ -1.41
CSPG4P5-201ENST00000558731 KRTAP29-1A8MX34 341 aaPredicted RBP6.22□□□□□ -1.41
CSPG4P5-201ENST00000558731 C7orf65Q6ZTY9 151 aa6.21□□□□□ -1.41
CSPG4P5-201ENST00000558731 C9orf92A6NGG3 77 aa6.21□□□□□ -1.42
CSPG4P5-201ENST00000558731 IGLV7-46A0A075B6I9 117 aa6.2□□□□□ -1.42
CSPG4P5-201ENST00000558731 SPINK7P58062 85 aa6.2□□□□□ -1.42
CSPG4P5-201ENST00000558731 SPINK1P00995 79 aa6.19□□□□□ -1.42
CSPG4P5-201ENST00000558731 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
CSPG4P5-201ENST00000558731 A6NN06 94 aa6.16□□□□□ -1.42
CSPG4P5-201ENST00000558731 RYR3Q15413 4870 aa6.16□□□□□ -1.42
CSPG4P5-201ENST00000558731 TP53AIP1Q9HCN2 124 aa6.15□□□□□ -1.42
CSPG4P5-201ENST00000558731 LINC01558Q9Y6Z2 57 aa6.14□□□□□ -1.43
CSPG4P5-201ENST00000558731 HRES1P13985 223 aa6.13□□□□□ -1.43
CSPG4P5-201ENST00000558731 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
CSPG4P5-201ENST00000558731 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
CSPG4P5-201ENST00000558731 IGKV2-30P06310 120 aa6.13□□□□□ -1.43
CSPG4P5-201ENST00000558731 C8orf87E5RJ46 101 aa6.12□□□□□ -1.43
CSPG4P5-201ENST00000558731 KIAA1109Q2LD37 5005 aa6.12□□□□□ -1.43
CSPG4P5-201ENST00000558731 Q5W150 140 aa6.11□□□□□ -1.43
CSPG4P5-201ENST00000558731 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.44
CSPG4P5-201ENST00000558731 Q8N1X5 172 aa6.07□□□□□ -1.44
CSPG4P5-201ENST00000558731 A0A1B0GU69 56 aa6.07□□□□□ -1.44
CSPG4P5-201ENST00000558731 ASB16-AS1Q495Z4 193 aa6.07□□□□□ -1.44
CSPG4P5-201ENST00000558731 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
CSPG4P5-201ENST00000558731 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
CSPG4P5-201ENST00000558731 ACYP2P14621 99 aa6.05□□□□□ -1.44
CSPG4P5-201ENST00000558731 KRTAP17-1Q9BYP8 105 aa6□□□□□ -1.45
CSPG4P5-201ENST00000558731 EPPK1P58107 5090 aaKnown RBP5.99□□□□□ -1.45
CSPG4P5-201ENST00000558731 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
CSPG4P5-201ENST00000558731 MYCBP2O75592 4640 aa5.98□□□□□ -1.45
CSPG4P5-201ENST00000558731 MIR22HGQ0VDD5 57 aa5.97□□□□□ -1.45
CSPG4P5-201ENST00000558731 HSPG2P98160 4391 aa5.97□□□□□ -1.45
CSPG4P5-201ENST00000558731 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
CSPG4P5-201ENST00000558731 H3BS24 57 aa5.96□□□□□ -1.46
CSPG4P5-201ENST00000558731 RYR1P21817 5038 aa5.95□□□□□ -1.46
CSPG4P5-201ENST00000558731 UQCR11O14957 56 aa5.95□□□□□ -1.46
CSPG4P5-201ENST00000558731 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
CSPG4P5-201ENST00000558731 KRTAP4-5Q9BYR2 181 aa5.93□□□□□ -1.46
CSPG4P5-201ENST00000558731 J3QL48 77 aa5.91□□□□□ -1.46
CSPG4P5-201ENST00000558731 KRTAP10-8P60410 259 aa5.91□□□□□ -1.46
CSPG4P5-201ENST00000558731 CSAG1Q6PB30 78 aa5.91□□□□□ -1.46
CSPG4P5-201ENST00000558731 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
CSPG4P5-201ENST00000558731 FAT3Q8TDW7 4589 aa5.87□□□□□ -1.47
CSPG4P5-201ENST00000558731 DMAC1Q96GE9 116 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms