RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TRBV7-4A0A0J9YYF1 115 aa4.58□□□□□ -1.68
PSEN1-223ENST00000557511 CCKP06307 115 aa4.58□□□□□ -1.68
PSEN1-223ENST00000557511 NAA38Q9BRA0 125 aaKnown RBP4.58□□□□□ -1.68
PSEN1-223ENST00000557511 VPS25Q9BRG1 176 aa4.58□□□□□ -1.68
PSEN1-223ENST00000557511 JMJD7-PLA2G4BH0Y9G9 81 aa4.57□□□□□ -1.68
PSEN1-223ENST00000557511 C9JAW5 83 aa4.56□□□□□ -1.68
PSEN1-223ENST00000557511 PCP4P48539 62 aa4.56□□□□□ -1.68
PSEN1-223ENST00000557511 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
PSEN1-223ENST00000557511 IGKV2-30P06310 120 aa4.55□□□□□ -1.68
PSEN1-223ENST00000557511 SIGMAR1Q99720 223 aa4.55□□□□□ -1.68
PSEN1-223ENST00000557511 PDE6GP18545 87 aa4.54□□□□□ -1.68
PSEN1-223ENST00000557511 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
PSEN1-223ENST00000557511 OBSCN-AS1Q96MR7 158 aa4.53□□□□□ -1.68
PSEN1-223ENST00000557511 A0A1W2PPM0 123 aa4.52□□□□□ -1.69
PSEN1-223ENST00000557511 IGKV4-1P06312 121 aa4.52□□□□□ -1.69
PSEN1-223ENST00000557511 PCOTHQ58A44 107 aa4.52□□□□□ -1.69
PSEN1-223ENST00000557511 Q96NJ1 140 aa4.52□□□□□ -1.69
PSEN1-223ENST00000557511 RPL37P61927 97 aaKnown RBP4.51□□□□□ -1.69
PSEN1-223ENST00000557511 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
PSEN1-223ENST00000557511 MUC2Q02817 5179 aa4.51□□□□□ -1.69
PSEN1-223ENST00000557511 A0A1B0GW54 56 aa4.5□□□□□ -1.69
PSEN1-223ENST00000557511 H3BT86 120 aa4.5□□□□□ -1.69
PSEN1-223ENST00000557511 TAX1BP3O14907 124 aa4.5□□□□□ -1.69
PSEN1-223ENST00000557511 COL5A1-AS1Q5SY13 56 aa4.5□□□□□ -1.69
PSEN1-223ENST00000557511 Q8N9P0 234 aaPredicted RBP4.5□□□□□ -1.69
PSEN1-223ENST00000557511 J3KT08 172 aa4.49□□□□□ -1.69
PSEN1-223ENST00000557511 LOC110117498A0A087WWA1 95 aa4.48□□□□□ -1.69
PSEN1-223ENST00000557511 NDUFB1O75438 58 aa4.48□□□□□ -1.69
PSEN1-223ENST00000557511 LINC00313P59037 77 aa4.48□□□□□ -1.69
PSEN1-223ENST00000557511 C14orf132Q9NPU4 83 aa4.48□□□□□ -1.69
PSEN1-223ENST00000557511 SPCS1Q9Y6A9 102 aa4.48□□□□□ -1.69
PSEN1-223ENST00000557511 DSCR10P59022 87 aa4.47□□□□□ -1.69
PSEN1-223ENST00000557511 DEFB116Q30KQ4 102 aa4.47□□□□□ -1.69
PSEN1-223ENST00000557511 Q6ZQT0 140 aa4.47□□□□□ -1.69
PSEN1-223ENST00000557511 Q75L30 129 aa4.47□□□□□ -1.69
PSEN1-223ENST00000557511 LINC00472Q9H8W2 130 aa4.47□□□□□ -1.69
PSEN1-223ENST00000557511 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
PSEN1-223ENST00000557511 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
PSEN1-223ENST00000557511 NREPQ16612 68 aa4.45□□□□□ -1.7
PSEN1-223ENST00000557511 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
PSEN1-223ENST00000557511 MTURNQ8N3F0 131 aa4.44□□□□□ -1.7
PSEN1-223ENST00000557511 MPLKIPQ8TAP9 179 aa4.44□□□□□ -1.7
PSEN1-223ENST00000557511 A0A1B0GVX0 72 aa4.43□□□□□ -1.7
PSEN1-223ENST00000557511 GTF2H5Q6ZYL4 71 aa4.43□□□□□ -1.7
PSEN1-223ENST00000557511 C20orf166-AS1Q96NR2 134 aa4.43□□□□□ -1.7
PSEN1-223ENST00000557511 A8MUU9 505 aa4.42□□□□□ -1.7
PSEN1-223ENST00000557511 COX6B2Q6YFQ2 88 aa4.42□□□□□ -1.7
PSEN1-223ENST00000557511 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
PSEN1-223ENST00000557511 K7EP34 96 aa4.41□□□□□ -1.7
PSEN1-223ENST00000557511 A0A1B0GV90 55 aa4.39□□□□□ -1.71
PSEN1-223ENST00000557511 A8MWP4 228 aa4.39□□□□□ -1.71
PSEN1-223ENST00000557511 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
PSEN1-223ENST00000557511 BPY2O14599 106 aa4.37□□□□□ -1.71
PSEN1-223ENST00000557511 C8orf17Q9NRJ1 99 aa4.37□□□□□ -1.71
PSEN1-223ENST00000557511 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
PSEN1-223ENST00000557511 F8W1H4 67 aa4.36□□□□□ -1.71
PSEN1-223ENST00000557511 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
PSEN1-223ENST00000557511 UBL5Q9BZL1 73 aa4.36□□□□□ -1.71
PSEN1-223ENST00000557511 IGKV2D-30A0A075B6S6 120 aa4.35□□□□□ -1.71
PSEN1-223ENST00000557511 IGKV3D-7A0A0C4DH55 119 aa4.35□□□□□ -1.71
PSEN1-223ENST00000557511 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
PSEN1-223ENST00000557511 Q6ZVQ6 151 aa4.34□□□□□ -1.71
PSEN1-223ENST00000557511 M0R2T5 61 aa4.33□□□□□ -1.72
PSEN1-223ENST00000557511 PRO0461Q9UI25 63 aa4.33□□□□□ -1.72
PSEN1-223ENST00000557511 FAM236DA0A1B0GTK5 79 aa4.32□□□□□ -1.72
PSEN1-223ENST00000557511 NDUFS5O43920 106 aa4.32□□□□□ -1.72
PSEN1-223ENST00000557511 FAM236CP0DP71 79 aa4.32□□□□□ -1.72
PSEN1-223ENST00000557511 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
PSEN1-223ENST00000557511 ZCCHC13Q8WW36 166 aaKnown RBP4.32□□□□□ -1.72
PSEN1-223ENST00000557511 RBM12B-AS1Q9P1G2 102 aa4.32□□□□□ -1.72
PSEN1-223ENST00000557511 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
PSEN1-223ENST00000557511 K7EQZ3 153 aa4.31□□□□□ -1.72
PSEN1-223ENST00000557511 LCE1AQ5T7P2 110 aa4.31□□□□□ -1.72
PSEN1-223ENST00000557511 MRPL34Q9BQ48 92 aaKnown RBP4.31□□□□□ -1.72
PSEN1-223ENST00000557511 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
PSEN1-223ENST00000557511 ETDBQ3ZM63 59 aa4.3□□□□□ -1.72
PSEN1-223ENST00000557511 MMP24-AS1A0A0U1RRL7 71 aa4.29□□□□□ -1.72
PSEN1-223ENST00000557511 LINC00846Q9NV44 126 aa4.28□□□□□ -1.72
PSEN1-223ENST00000557511 MT1HP80294 61 aa4.27□□□□□ -1.73
PSEN1-223ENST00000557511 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
PSEN1-223ENST00000557511 CASC2Q6XLA1 102 aa4.27□□□□□ -1.73
PSEN1-223ENST00000557511 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
PSEN1-223ENST00000557511 ACYP1P07311 99 aa4.26□□□□□ -1.73
PSEN1-223ENST00000557511 SPINK7P58062 85 aa4.26□□□□□ -1.73
PSEN1-223ENST00000557511 Q8N9L7 120 aa4.25□□□□□ -1.73
PSEN1-223ENST00000557511 HCG22E2RYF7 251 aa4.23□□□□□ -1.73
PSEN1-223ENST00000557511 CXCL6P80162 114 aa4.23□□□□□ -1.73
PSEN1-223ENST00000557511 HRES1P13985 223 aa4.22□□□□□ -1.73
PSEN1-223ENST00000557511 C7orf65Q6ZTY9 151 aa4.2□□□□□ -1.74
PSEN1-223ENST00000557511 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
PSEN1-223ENST00000557511 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
PSEN1-223ENST00000557511 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
PSEN1-223ENST00000557511 TP53AIP1Q9HCN2 124 aa4.18□□□□□ -1.74
PSEN1-223ENST00000557511 J3QR89 54 aa4.17□□□□□ -1.74
PSEN1-223ENST00000557511 HIST1H4AP62805 103 aaKnown RBP4.16□□□□□ -1.74
PSEN1-223ENST00000557511 Q5W150 140 aa4.15□□□□□ -1.75
PSEN1-223ENST00000557511 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
PSEN1-223ENST00000557511 FLGP20930 4061 aaPredicted RBP4.12□□□□□ -1.75
PSEN1-223ENST00000557511 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
PSEN1-223ENST00000557511 TRAV22A0A0B4J277 110 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms