RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TRBV7-7A0A0K0K1E9 115 aa7.19□□□□□ -1.26
PSEN1-219ENST00000556951 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
PSEN1-219ENST00000556951 Q6ZVQ6 151 aa7.19□□□□□ -1.26
PSEN1-219ENST00000556951 LINC00304Q8N9R0 145 aa7.19□□□□□ -1.26
PSEN1-219ENST00000556951 SIGMAR1Q99720 223 aa7.18□□□□□ -1.26
PSEN1-219ENST00000556951 A0A087WSZ3 146 aa7.17□□□□□ -1.26
PSEN1-219ENST00000556951 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
PSEN1-219ENST00000556951 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
PSEN1-219ENST00000556951 HRCT1Q6UXD1 115 aa7.16□□□□□ -1.26
PSEN1-219ENST00000556951 MT-ATP8P03928 68 aa7.15□□□□□ -1.26
PSEN1-219ENST00000556951 ATP5EP2Q5VTU8 51 aa7.15□□□□□ -1.26
PSEN1-219ENST00000556951 SS18L2Q9UHA2 77 aa7.14□□□□□ -1.27
PSEN1-219ENST00000556951 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
PSEN1-219ENST00000556951 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
PSEN1-219ENST00000556951 IGKV3D-7A0A0C4DH55 119 aa7.12□□□□□ -1.27
PSEN1-219ENST00000556951 CXCL6P80162 114 aa7.12□□□□□ -1.27
PSEN1-219ENST00000556951 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
PSEN1-219ENST00000556951 BPY2O14599 106 aa7.11□□□□□ -1.27
PSEN1-219ENST00000556951 MT1HP80294 61 aa7.11□□□□□ -1.27
PSEN1-219ENST00000556951 SPAG11AQ6PDA7 123 aa7.11□□□□□ -1.27
PSEN1-219ENST00000556951 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
PSEN1-219ENST00000556951 SPINK1P00995 79 aa7.09□□□□□ -1.27
PSEN1-219ENST00000556951 Q5XG85 94 aa7.09□□□□□ -1.27
PSEN1-219ENST00000556951 IMUPQ9GZP8 106 aa7.09□□□□□ -1.27
PSEN1-219ENST00000556951 LINC00472Q9H8W2 130 aa7.09□□□□□ -1.27
PSEN1-219ENST00000556951 J3KT08 172 aa7.07□□□□□ -1.28
PSEN1-219ENST00000556951 FP248Q71RG6 208 aaPredicted RBP7.07□□□□□ -1.28
PSEN1-219ENST00000556951 LIMD2Q9BT23 127 aa7.07□□□□□ -1.28
PSEN1-219ENST00000556951 RPS29P62273 56 aaKnown RBP7.06□□□□□ -1.28
PSEN1-219ENST00000556951 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
PSEN1-219ENST00000556951 DEFB116Q30KQ4 102 aa7.04□□□□□ -1.28
PSEN1-219ENST00000556951 Q96NJ1 140 aa7.04□□□□□ -1.28
PSEN1-219ENST00000556951 DSCR10P59022 87 aa7.03□□□□□ -1.28
PSEN1-219ENST00000556951 HIST1H4AP62805 103 aaKnown RBP7.03□□□□□ -1.28
PSEN1-219ENST00000556951 IGKV4-1P06312 121 aa7.02□□□□□ -1.29
PSEN1-219ENST00000556951 NEBP20929 6669 aa7.01□□□□□ -1.29
PSEN1-219ENST00000556951 A8MWP4 228 aa7□□□□□ -1.29
PSEN1-219ENST00000556951 NDUFB1O75438 58 aa6.99□□□□□ -1.29
PSEN1-219ENST00000556951 SCGB1A1P11684 91 aa6.99□□□□□ -1.29
PSEN1-219ENST00000556951 C1orf195Q5TG92 126 aa6.99□□□□□ -1.29
PSEN1-219ENST00000556951 Q8N9L7 120 aa6.99□□□□□ -1.29
PSEN1-219ENST00000556951 PRR15Q8IV56 129 aa6.98□□□□□ -1.29
PSEN1-219ENST00000556951 A0A087WVE0 104 aa6.97□□□□□ -1.29
PSEN1-219ENST00000556951 K7EQZ3 153 aa6.97□□□□□ -1.29
PSEN1-219ENST00000556951 XP32Q5T750 250 aa6.97□□□□□ -1.29
PSEN1-219ENST00000556951 A0A1B0GVX0 72 aa6.94□□□□□ -1.3
PSEN1-219ENST00000556951 KRTAP19-1Q8IUB9 90 aa6.94□□□□□ -1.3
PSEN1-219ENST00000556951 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
PSEN1-219ENST00000556951 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
PSEN1-219ENST00000556951 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
PSEN1-219ENST00000556951 IGHV6-1A0A0B4J1U7 121 aa6.91□□□□□ -1.3
PSEN1-219ENST00000556951 HCG22E2RYF7 251 aa6.91□□□□□ -1.3
PSEN1-219ENST00000556951 KRTAP20-1Q3LI63 56 aa6.9□□□□□ -1.3
PSEN1-219ENST00000556951 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
PSEN1-219ENST00000556951 C8orf17Q9NRJ1 99 aa6.89□□□□□ -1.31
PSEN1-219ENST00000556951 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
PSEN1-219ENST00000556951 ATOX1O00244 68 aa6.87□□□□□ -1.31
PSEN1-219ENST00000556951 CASC2Q6XLA1 102 aa6.87□□□□□ -1.31
PSEN1-219ENST00000556951 M0R2T5 61 aa6.86□□□□□ -1.31
PSEN1-219ENST00000556951 LINC00313P59037 77 aa6.86□□□□□ -1.31
PSEN1-219ENST00000556951 WFDC13Q8IUB5 93 aa6.86□□□□□ -1.31
PSEN1-219ENST00000556951 hDV103S1A0JD37 113 aa6.85□□□□□ -1.31
PSEN1-219ENST00000556951 FLGP20930 4061 aaPredicted RBP6.85□□□□□ -1.31
PSEN1-219ENST00000556951 PCOTHQ58A44 107 aa6.84□□□□□ -1.31
PSEN1-219ENST00000556951 NOTCH2NLQ7Z3S9 236 aa6.84□□□□□ -1.31
PSEN1-219ENST00000556951 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
PSEN1-219ENST00000556951 TMEM254Q8TBM7 123 aa6.83□□□□□ -1.32
PSEN1-219ENST00000556951 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
PSEN1-219ENST00000556951 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
PSEN1-219ENST00000556951 TRAV7A0A075B6U4 112 aa6.79□□□□□ -1.32
PSEN1-219ENST00000556951 SERP2Q8N6R1 65 aa6.78□□□□□ -1.32
PSEN1-219ENST00000556951 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
PSEN1-219ENST00000556951 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
PSEN1-219ENST00000556951 TP53AIP1Q9HCN2 124 aa6.76□□□□□ -1.33
PSEN1-219ENST00000556951 UQCRQO14949 82 aa6.75□□□□□ -1.33
PSEN1-219ENST00000556951 PCP4P48539 62 aa6.75□□□□□ -1.33
PSEN1-219ENST00000556951 NDUFS5O43920 106 aa6.74□□□□□ -1.33
PSEN1-219ENST00000556951 COX7CP15954 63 aa6.74□□□□□ -1.33
PSEN1-219ENST00000556951 Q8N9P0 234 aaPredicted RBP6.74□□□□□ -1.33
PSEN1-219ENST00000556951 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
PSEN1-219ENST00000556951 C9orf92A6NGG3 77 aa6.73□□□□□ -1.33
PSEN1-219ENST00000556951 C5orf47Q569G3 176 aa6.71□□□□□ -1.34
PSEN1-219ENST00000556951 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
PSEN1-219ENST00000556951 A8MUU9 505 aa6.67□□□□□ -1.34
PSEN1-219ENST00000556951 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
PSEN1-219ENST00000556951 MP68P56378 58 aa6.66□□□□□ -1.34
PSEN1-219ENST00000556951 H0Y9P7 68 aa6.65□□□□□ -1.34
PSEN1-219ENST00000556951 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.34
PSEN1-219ENST00000556951 TRAV22A0A0B4J277 110 aa6.64□□□□□ -1.35
PSEN1-219ENST00000556951 H3BPC8 53 aa6.64□□□□□ -1.35
PSEN1-219ENST00000556951 Q75L30 129 aa6.64□□□□□ -1.35
PSEN1-219ENST00000556951 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
PSEN1-219ENST00000556951 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
PSEN1-219ENST00000556951 Q5W150 140 aa6.62□□□□□ -1.35
PSEN1-219ENST00000556951 LCE2BO14633 110 aa6.61□□□□□ -1.35
PSEN1-219ENST00000556951 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
PSEN1-219ENST00000556951 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
PSEN1-219ENST00000556951 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
PSEN1-219ENST00000556951 KLKP1Q107X0 134 aa6.59□□□□□ -1.35
PSEN1-219ENST00000556951 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms