RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 CCKP06307 115 aa8.95□□□□□ -0.98
TGFB3-206ENST00000556674 SS18L2Q9UHA2 77 aa8.95□□□□□ -0.98
TGFB3-206ENST00000556674 SEC61BP60468 96 aaKnown RBP8.94□□□□□ -0.98
TGFB3-206ENST00000556674 COX7CP15954 63 aa8.93□□□□□ -0.98
TGFB3-206ENST00000556674 ASB16-AS1Q495Z4 193 aa8.93□□□□□ -0.98
TGFB3-206ENST00000556674 IGFL1Q6UW32 110 aa8.93□□□□□ -0.98
TGFB3-206ENST00000556674 A0A0G2JQZ4 141 aa8.92□□□□□ -0.98
TGFB3-206ENST00000556674 XP32Q5T750 250 aa8.92□□□□□ -0.98
TGFB3-206ENST00000556674 C1orf195Q5TG92 126 aa8.92□□□□□ -0.98
TGFB3-206ENST00000556674 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
TGFB3-206ENST00000556674 PDE6GP18545 87 aa8.9□□□□□ -0.98
TGFB3-206ENST00000556674 LOC110117498A0A087WWA1 95 aa8.88□□□□□ -0.99
TGFB3-206ENST00000556674 LINC00846Q9NV44 126 aa8.88□□□□□ -0.99
TGFB3-206ENST00000556674 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
TGFB3-206ENST00000556674 UBL5Q9BZL1 73 aa8.83□□□□□ -1
TGFB3-206ENST00000556674 C9orf92A6NGG3 77 aa8.82□□□□□ -1
TGFB3-206ENST00000556674 TMEM258P61165 79 aa8.81□□□□□ -1
TGFB3-206ENST00000556674 RPS28P62857 69 aaKnown RBP8.81□□□□□ -1
TGFB3-206ENST00000556674 Q6ZQT0 140 aa8.8□□□□□ -1
TGFB3-206ENST00000556674 SMIM20Q8N5G0 67 aa8.8□□□□□ -1
TGFB3-206ENST00000556674 RBM3P98179 157 aaKnown RBP8.79□□□□□ -1
TGFB3-206ENST00000556674 IGKV3D-7A0A0C4DH55 119 aa8.77□□□□□ -1.01
TGFB3-206ENST00000556674 J3KT08 172 aa8.77□□□□□ -1.01
TGFB3-206ENST00000556674 CXCL6P80162 114 aa8.76□□□□□ -1.01
TGFB3-206ENST00000556674 A0A087WSZ3 146 aa8.74□□□□□ -1.01
TGFB3-206ENST00000556674 TRBV7-4A0A0J9YYF1 115 aa8.74□□□□□ -1.01
TGFB3-206ENST00000556674 DSCR8Q96T75 97 aa8.74□□□□□ -1.01
TGFB3-206ENST00000556674 A0A1W2PNM2 257 aa8.71□□□□□ -1.02
TGFB3-206ENST00000556674 RPL37P61927 97 aaKnown RBP8.71□□□□□ -1.02
TGFB3-206ENST00000556674 KRTAP4-1Q9BYQ7 146 aa8.71□□□□□ -1.02
TGFB3-206ENST00000556674 A0A1B0GW54 56 aa8.7□□□□□ -1.02
TGFB3-206ENST00000556674 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
TGFB3-206ENST00000556674 TRAV7A0A075B6U4 112 aa8.68□□□□□ -1.02
TGFB3-206ENST00000556674 A0A087WVE0 104 aa8.68□□□□□ -1.02
TGFB3-206ENST00000556674 Q6ZVQ6 151 aa8.67□□□□□ -1.02
TGFB3-206ENST00000556674 Q96NJ1 140 aa8.64□□□□□ -1.03
TGFB3-206ENST00000556674 Q75L30 129 aa8.63□□□□□ -1.03
TGFB3-206ENST00000556674 KLKP1Q107X0 134 aa8.62□□□□□ -1.03
TGFB3-206ENST00000556674 NDUFC1O43677 76 aa8.61□□□□□ -1.03
TGFB3-206ENST00000556674 ATP11AUNQ6ZP68 121 aa8.6□□□□□ -1.03
TGFB3-206ENST00000556674 ATP5EP56381 51 aaPredicted RBP8.59□□□□□ -1.03
TGFB3-206ENST00000556674 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
TGFB3-206ENST00000556674 IGKV4-1P06312 121 aa8.58□□□□□ -1.04
TGFB3-206ENST00000556674 LINC00472Q9H8W2 130 aa8.57□□□□□ -1.04
TGFB3-206ENST00000556674 C20orf166-AS1Q96NR2 134 aa8.56□□□□□ -1.04
TGFB3-206ENST00000556674 CYSTM1Q9H1C7 97 aa8.56□□□□□ -1.04
TGFB3-206ENST00000556674 FAM236DA0A1B0GTK5 79 aa8.54□□□□□ -1.04
TGFB3-206ENST00000556674 FAM236CP0DP71 79 aa8.54□□□□□ -1.04
TGFB3-206ENST00000556674 LINC00313P59037 77 aa8.53□□□□□ -1.04
TGFB3-206ENST00000556674 KRTAP9-7A8MTY7 169 aa8.52□□□□□ -1.05
TGFB3-206ENST00000556674 A8MUU9 505 aa8.52□□□□□ -1.05
TGFB3-206ENST00000556674 MT1HP80294 61 aa8.52□□□□□ -1.05
TGFB3-206ENST00000556674 C20orf197Q8N268 126 aa8.52□□□□□ -1.05
TGFB3-206ENST00000556674 SERP1Q9Y6X1 66 aa8.52□□□□□ -1.05
TGFB3-206ENST00000556674 H7BZZ5 65 aa8.51□□□□□ -1.05
TGFB3-206ENST00000556674 DSCR10P59022 87 aa8.5□□□□□ -1.05
TGFB3-206ENST00000556674 KRTAP19-2Q3LHN2 52 aa8.5□□□□□ -1.05
TGFB3-206ENST00000556674 C5orf47Q569G3 176 aa8.5□□□□□ -1.05
TGFB3-206ENST00000556674 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
TGFB3-206ENST00000556674 DEFB116Q30KQ4 102 aa8.48□□□□□ -1.05
TGFB3-206ENST00000556674 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
TGFB3-206ENST00000556674 NREPQ16612 68 aa8.47□□□□□ -1.05
TGFB3-206ENST00000556674 IGHV6-1A0A0B4J1U7 121 aa8.46□□□□□ -1.06
TGFB3-206ENST00000556674 A0A1B0GVX0 72 aa8.45□□□□□ -1.06
TGFB3-206ENST00000556674 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.45□□□□□ -1.06
TGFB3-206ENST00000556674 BPY2O14599 106 aa8.44□□□□□ -1.06
TGFB3-206ENST00000556674 NDUFB1O75438 58 aa8.44□□□□□ -1.06
TGFB3-206ENST00000556674 KRTAP10-6P60371 365 aaPredicted RBP8.44□□□□□ -1.06
TGFB3-206ENST00000556674 KRTAP16-1A8MUX0 517 aa8.43□□□□□ -1.06
TGFB3-206ENST00000556674 COX6B2Q6YFQ2 88 aa8.42□□□□□ -1.06
TGFB3-206ENST00000556674 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
TGFB3-206ENST00000556674 TMEM254Q8TBM7 123 aa8.4□□□□□ -1.06
TGFB3-206ENST00000556674 NOTCH2NLQ7Z3S9 236 aa8.39□□□□□ -1.07
TGFB3-206ENST00000556674 SMIM26A0A096LP01 95 aa8.38□□□□□ -1.07
TGFB3-206ENST00000556674 A8MWP4 228 aa8.37□□□□□ -1.07
TGFB3-206ENST00000556674 SNURFQ9Y675 71 aa8.33□□□□□ -1.08
TGFB3-206ENST00000556674 M0R2T5 61 aa8.3□□□□□ -1.08
TGFB3-206ENST00000556674 C8orf17Q9NRJ1 99 aa8.3□□□□□ -1.08
TGFB3-206ENST00000556674 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
TGFB3-206ENST00000556674 Q8N9P0 234 aaPredicted RBP8.29□□□□□ -1.08
TGFB3-206ENST00000556674 Q8N9L7 120 aa8.26□□□□□ -1.09
TGFB3-206ENST00000556674 ZCCHC13Q8WW36 166 aaKnown RBP8.26□□□□□ -1.09
TGFB3-206ENST00000556674 HCG22E2RYF7 251 aa8.23□□□□□ -1.09
TGFB3-206ENST00000556674 C4orf26Q17RF5 130 aa8.23□□□□□ -1.09
TGFB3-206ENST00000556674 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
TGFB3-206ENST00000556674 SSPOA2VEC9 5147 aa8.23□□□□□ -1.09
TGFB3-206ENST00000556674 H3BPC8 53 aa8.22□□□□□ -1.09
TGFB3-206ENST00000556674 USH2AO75445 5202 aa8.22□□□□□ -1.09
TGFB3-206ENST00000556674 CYP4F30PQ9H0H9 118 aa8.2□□□□□ -1.1
TGFB3-206ENST00000556674 MMP24-AS1A0A0U1RRL7 71 aa8.19□□□□□ -1.1
TGFB3-206ENST00000556674 MRPL34Q9BQ48 92 aaKnown RBP8.19□□□□□ -1.1
TGFB3-206ENST00000556674 K7EQZ3 153 aa8.18□□□□□ -1.1
TGFB3-206ENST00000556674 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
TGFB3-206ENST00000556674 HRES1P13985 223 aa8.17□□□□□ -1.1
TGFB3-206ENST00000556674 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
TGFB3-206ENST00000556674 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
TGFB3-206ENST00000556674 FLGP20930 4061 aaPredicted RBP8.17□□□□□ -1.1
TGFB3-206ENST00000556674 SPINK7P58062 85 aa8.15□□□□□ -1.1
TGFB3-206ENST00000556674 MP68P56378 58 aa8.13□□□□□ -1.11
TGFB3-206ENST00000556674 SYNE2Q8WXH0 6885 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms