RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 UBR5O95071 2799 aaPredicted RBP1.31□□□□□ -2.2
GPHN-214ENST00000556633 ADGRG4Q8IZF6 3080 aa1.31□□□□□ -2.2
GPHN-214ENST00000556633 A8MTW9 85 aa1.31□□□□□ -2.2
GPHN-214ENST00000556633 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
GPHN-214ENST00000556633 HIVEP3Q5T1R4 2406 aa1.31□□□□□ -2.2
GPHN-214ENST00000556633 FAM208BQ5VWN6 2430 aa1.31□□□□□ -2.2
GPHN-214ENST00000556633 ZANQ9Y493 2812 aa1.31□□□□□ -2.2
GPHN-214ENST00000556633 HELZ2Q9BYK8 2649 aaKnown RBP1.31□□□□□ -2.2
GPHN-214ENST00000556633 DNHD1Q96M86 4753 aa1.31□□□□□ -2.2
GPHN-214ENST00000556633 PTPRZ1P23471 2315 aaPredicted RBP1.31□□□□□ -2.2
GPHN-214ENST00000556633 ACACAQ13085 2346 aa1.31□□□□□ -2.2
GPHN-214ENST00000556633 PTPN13Q12923 2485 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 OTOGQ6ZRI0 2925 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 SETXQ7Z333 2677 aaKnown RBP1.3□□□□□ -2.2
GPHN-214ENST00000556633 LYNX1P0DP58 116 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 KRTAP21-3Q3LHN1 58 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 H1FX-AS1Q4G0G2 97 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 DEFB104AQ8WTQ1 72 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 TOMM7Q9P0U1 55 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 CNTRLQ7Z7A1 2325 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 NBASA2RRP1 2371 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 ZNF469Q96JG9 3925 aaPredicted RBP1.3□□□□□ -2.2
GPHN-214ENST00000556633 CENPEQ02224 2701 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 ITPR2Q14571 2701 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 PDZD2O15018 2839 aa1.3□□□□□ -2.2
GPHN-214ENST00000556633 CACNA1BQ00975 2339 aa1.29□□□□□ -2.2
GPHN-214ENST00000556633 SPRR1AP35321 89 aa1.29□□□□□ -2.2
GPHN-214ENST00000556633 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
GPHN-214ENST00000556633 DEFB109BQ30KR1 87 aa1.29□□□□□ -2.2
GPHN-214ENST00000556633 PCNX1Q96RV3 2341 aa1.29□□□□□ -2.2
GPHN-214ENST00000556633 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
GPHN-214ENST00000556633 CSMD2Q7Z408 3487 aa1.28□□□□□ -2.2
GPHN-214ENST00000556633 VPS13CQ709C8 3753 aa1.28□□□□□ -2.2
GPHN-214ENST00000556633 ABCA2Q9BZC7 2435 aa1.28□□□□□ -2.2
GPHN-214ENST00000556633 CMYA5Q8N3K9 4069 aa1.28□□□□□ -2.2
GPHN-214ENST00000556633 K7EIL1 84 aa1.28□□□□□ -2.2
GPHN-214ENST00000556633 USMG5Q96IX5 58 aa1.28□□□□□ -2.2
GPHN-214ENST00000556633 COL6A6A6NMZ7 2263 aa1.28□□□□□ -2.2
GPHN-214ENST00000556633 SPTAN1Q13813 2472 aaKnown RBP1.28□□□□□ -2.2
GPHN-214ENST00000556633 FASNP49327 2511 aaKnown RBP1.28□□□□□ -2.2
GPHN-214ENST00000556633 ANKRD17O75179 2603 aaKnown RBP1.28□□□□□ -2.2
GPHN-214ENST00000556633 APCP25054 2843 aa1.28□□□□□ -2.2
GPHN-214ENST00000556633 MAP1AP78559 2803 aaPredicted RBP1.28□□□□□ -2.2
GPHN-214ENST00000556633 MYO18BQ8IUG5 2567 aa1.27□□□□□ -2.21
GPHN-214ENST00000556633 DEFB130BP0DP73 79 aa1.27□□□□□ -2.21
GPHN-214ENST00000556633 DEFB130AP0DP74 79 aa1.27□□□□□ -2.21
GPHN-214ENST00000556633 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
GPHN-214ENST00000556633 UNQ6190/PRO20217Q6UXQ8 127 aa1.27□□□□□ -2.21
GPHN-214ENST00000556633 DEFB119Q8N690 84 aa1.27□□□□□ -2.21
GPHN-214ENST00000556633 LRRK2Q5S007 2527 aa1.26□□□□□ -2.21
GPHN-214ENST00000556633 ZNF462Q96JM2 2506 aa1.26□□□□□ -2.21
GPHN-214ENST00000556633 URB1O60287 2271 aaKnown RBP1.26□□□□□ -2.21
GPHN-214ENST00000556633 DOPEY2Q9Y3R5 2298 aa1.26□□□□□ -2.21
GPHN-214ENST00000556633 SPRR1BP22528 89 aa1.26□□□□□ -2.21
GPHN-214ENST00000556633 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
GPHN-214ENST00000556633 U3KQA8 63 aa1.26□□□□□ -2.21
GPHN-214ENST00000556633 CSMD1Q96PZ7 3565 aa1.26□□□□□ -2.21
GPHN-214ENST00000556633 TEX15Q9BXT5 2789 aa1.26□□□□□ -2.21
GPHN-214ENST00000556633 USP9YO00507 2555 aaPredicted RBP1.26□□□□□ -2.21
GPHN-214ENST00000556633 POLQO75417 2590 aa1.25□□□□□ -2.21
GPHN-214ENST00000556633 SPTBN1Q01082 2364 aaKnown RBP1.25□□□□□ -2.21
GPHN-214ENST00000556633 UBE2DNLQ8IWF7 75 aa1.25□□□□□ -2.21
GPHN-214ENST00000556633 C10orf95Q9H7T3 257 aa1.25□□□□□ -2.21
GPHN-214ENST00000556633 HECTD1Q9ULT8 2610 aa1.25□□□□□ -2.21
GPHN-214ENST00000556633 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
GPHN-214ENST00000556633 PLCE1Q9P212 2302 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 TEP1Q99973 2627 aaKnown RBP1.24□□□□□ -2.21
GPHN-214ENST00000556633 UNC79Q9P2D8 2635 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 CUBNO60494 3623 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 MXRA5Q9NR99 2828 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 H3BUA1 57 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 AKAP6Q13023 2319 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 MAST4O15021 2626 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 DOPEY1Q5JWR5 2465 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 SPTA1P02549 2419 aa1.24□□□□□ -2.21
GPHN-214ENST00000556633 DNAH3Q8TD57 4116 aa1.23□□□□□ -2.21
GPHN-214ENST00000556633 NF1P21359 2839 aa1.23□□□□□ -2.21
GPHN-214ENST00000556633 APELAP0DMC3 54 aa1.23□□□□□ -2.21
GPHN-214ENST00000556633 LELP1Q5T871 98 aa1.23□□□□□ -2.21
GPHN-214ENST00000556633 ITPR3Q14573 2671 aa1.23□□□□□ -2.21
GPHN-214ENST00000556633 DNAH9Q9NYC9 4486 aa1.23□□□□□ -2.21
GPHN-214ENST00000556633 NAV2Q8IVL1 2488 aa1.23□□□□□ -2.21
GPHN-214ENST00000556633 HIVEP1P15822 2718 aa1.23□□□□□ -2.21
GPHN-214ENST00000556633 ROS1P08922 2347 aa1.22□□□□□ -2.21
GPHN-214ENST00000556633 TENM1Q9UKZ4 2725 aa1.22□□□□□ -2.21
GPHN-214ENST00000556633 DEFB105AQ8NG35 78 aa1.22□□□□□ -2.21
GPHN-214ENST00000556633 VWFP04275 2813 aa1.22□□□□□ -2.21
GPHN-214ENST00000556633 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.22□□□□□ -2.217e-9■□□□□ 8.6
GPHN-214ENST00000556633 PKDREJQ9NTG1 2253 aa1.22□□□□□ -2.21
GPHN-214ENST00000556633 NSD1Q96L73 2696 aaPredicted RBP1.22□□□□□ -2.21
GPHN-214ENST00000556633 FLNBO75369 2602 aaKnown RBP1.21□□□□□ -2.22
GPHN-214ENST00000556633 PLECQ15149 4684 aaKnown RBP1.21□□□□□ -2.22
GPHN-214ENST00000556633 SACSQ9NZJ4 4579 aa1.21□□□□□ -2.22
GPHN-214ENST00000556633 MYO9AB2RTY4 2548 aa1.21□□□□□ -2.22
GPHN-214ENST00000556633 RHPN1-AS1Q9BWJ2 59 aa1.21□□□□□ -2.22
GPHN-214ENST00000556633 NIPBLQ6KC79 2804 aaeCLIP1.21□□□□□ -2.22
GPHN-214ENST00000556633 FLNAP21333 2647 aaKnown RBP1.21□□□□□ -2.22
GPHN-214ENST00000556633 ACANP16112 2415 aa1.21□□□□□ -2.22
GPHN-214ENST00000556633 TLN2Q9Y4G6 2542 aa1.21□□□□□ -2.22
GPHN-214ENST00000556633 SVEP1Q4LDE5 3571 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms