RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 NOTCH2NLQ7Z3S9 236 aa9.05□□□□□ -0.96
PSEN1-217ENST00000556533 A0A1B0GW54 56 aa9.04□□□□□ -0.96
PSEN1-217ENST00000556533 J3KT08 172 aa9.03□□□□□ -0.96
PSEN1-217ENST00000556533 GTF2H5Q6ZYL4 71 aa9.03□□□□□ -0.96
PSEN1-217ENST00000556533 C20orf166-AS1Q96NR2 134 aa9.03□□□□□ -0.96
PSEN1-217ENST00000556533 A8MUU9 505 aa9.02□□□□□ -0.97
PSEN1-217ENST00000556533 K7EP34 96 aa9.02□□□□□ -0.97
PSEN1-217ENST00000556533 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
PSEN1-217ENST00000556533 NREPQ16612 68 aa9□□□□□ -0.97
PSEN1-217ENST00000556533 SMCPP49901 116 aaPredicted RBP8.99□□□□□ -0.97
PSEN1-217ENST00000556533 KRTAP16-1A8MUX0 517 aa8.98□□□□□ -0.97
PSEN1-217ENST00000556533 NDUFB1O75438 58 aa8.98□□□□□ -0.97
PSEN1-217ENST00000556533 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
PSEN1-217ENST00000556533 C8orf87E5RJ46 101 aa8.97□□□□□ -0.97
PSEN1-217ENST00000556533 PRO0461Q9UI25 63 aa8.95□□□□□ -0.98
PSEN1-217ENST00000556533 A8MWP4 228 aa8.94□□□□□ -0.98
PSEN1-217ENST00000556533 IGKV3D-7A0A0C4DH55 119 aa8.91□□□□□ -0.98
PSEN1-217ENST00000556533 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
PSEN1-217ENST00000556533 LCE2CQ5TA81 110 aa8.91□□□□□ -0.98
PSEN1-217ENST00000556533 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
PSEN1-217ENST00000556533 C8orf17Q9NRJ1 99 aa8.88□□□□□ -0.99
PSEN1-217ENST00000556533 F8W1H4 67 aa8.87□□□□□ -0.99
PSEN1-217ENST00000556533 PRR15Q8IV56 129 aa8.86□□□□□ -0.99
PSEN1-217ENST00000556533 BPY2O14599 106 aa8.85□□□□□ -0.99
PSEN1-217ENST00000556533 Q6ZVQ6 151 aa8.84□□□□□ -0.99
PSEN1-217ENST00000556533 K7EQZ3 153 aa8.81□□□□□ -1
PSEN1-217ENST00000556533 MT1HP80294 61 aa8.8□□□□□ -1
PSEN1-217ENST00000556533 ETDBQ3ZM63 59 aa8.79□□□□□ -1
PSEN1-217ENST00000556533 Q8N9P0 234 aaPredicted RBP8.79□□□□□ -1
PSEN1-217ENST00000556533 ZCCHC13Q8WW36 166 aaKnown RBP8.79□□□□□ -1
PSEN1-217ENST00000556533 LINC00846Q9NV44 126 aa8.79□□□□□ -1
PSEN1-217ENST00000556533 UBL5Q9BZL1 73 aa8.78□□□□□ -1
PSEN1-217ENST00000556533 MMP24-AS1A0A0U1RRL7 71 aa8.77□□□□□ -1.01
PSEN1-217ENST00000556533 Q8N9L7 120 aa8.76□□□□□ -1.01
PSEN1-217ENST00000556533 M0R2T5 61 aa8.75□□□□□ -1.01
PSEN1-217ENST00000556533 TMEM254Q8TBM7 123 aa8.75□□□□□ -1.01
PSEN1-217ENST00000556533 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
PSEN1-217ENST00000556533 MRPL34Q9BQ48 92 aaKnown RBP8.74□□□□□ -1.01
PSEN1-217ENST00000556533 NDUFS5O43920 106 aa8.73□□□□□ -1.01
PSEN1-217ENST00000556533 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.02
PSEN1-217ENST00000556533 FAM236DA0A1B0GTK5 79 aa8.69□□□□□ -1.02
PSEN1-217ENST00000556533 FAM236CP0DP71 79 aa8.69□□□□□ -1.02
PSEN1-217ENST00000556533 SPINK7P58062 85 aa8.68□□□□□ -1.02
PSEN1-217ENST00000556533 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
PSEN1-217ENST00000556533 HRES1P13985 223 aa8.67□□□□□ -1.02
PSEN1-217ENST00000556533 RBM12B-AS1Q9P1G2 102 aa8.67□□□□□ -1.02
PSEN1-217ENST00000556533 J3QR89 54 aa8.65□□□□□ -1.02
PSEN1-217ENST00000556533 K7ERU9 68 aa8.63□□□□□ -1.03
PSEN1-217ENST00000556533 FLGP20930 4061 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-217ENST00000556533 HCG22E2RYF7 251 aa8.6□□□□□ -1.03
PSEN1-217ENST00000556533 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-217ENST00000556533 MPLKIPQ8TAP9 179 aa8.6□□□□□ -1.03
PSEN1-217ENST00000556533 KRTAP9-2Q9BYQ4 174 aa8.6□□□□□ -1.03
PSEN1-217ENST00000556533 CXCL6P80162 114 aa8.57□□□□□ -1.04
PSEN1-217ENST00000556533 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-217ENST00000556533 Q5W150 140 aa8.56□□□□□ -1.04
PSEN1-217ENST00000556533 ACYP1P07311 99 aa8.55□□□□□ -1.04
PSEN1-217ENST00000556533 FAM240AA0A1B0GVK7 77 aa8.54□□□□□ -1.04
PSEN1-217ENST00000556533 IGKV2D-30A0A075B6S6 120 aa8.53□□□□□ -1.04
PSEN1-217ENST00000556533 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
PSEN1-217ENST00000556533 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.06
PSEN1-217ENST00000556533 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
PSEN1-217ENST00000556533 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
PSEN1-217ENST00000556533 ATP5EP2Q5VTU8 51 aa8.42□□□□□ -1.06
PSEN1-217ENST00000556533 TP53AIP1Q9HCN2 124 aa8.41□□□□□ -1.06
PSEN1-217ENST00000556533 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
PSEN1-217ENST00000556533 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
PSEN1-217ENST00000556533 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
PSEN1-217ENST00000556533 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
PSEN1-217ENST00000556533 A0A087WVE0 104 aa8.3□□□□□ -1.08
PSEN1-217ENST00000556533 MT2AP02795 61 aa8.27□□□□□ -1.09
PSEN1-217ENST00000556533 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
PSEN1-217ENST00000556533 KRTAP9-6A0A140TA67 174 aa8.24□□□□□ -1.09
PSEN1-217ENST00000556533 KRTAP10-10P60014 251 aa8.24□□□□□ -1.09
PSEN1-217ENST00000556533 UQCRQO14949 82 aa8.23□□□□□ -1.09
PSEN1-217ENST00000556533 IMUPQ9GZP8 106 aa8.23□□□□□ -1.09
PSEN1-217ENST00000556533 MT-ATP8P03928 68 aa8.22□□□□□ -1.09
PSEN1-217ENST00000556533 C1orf64Q8NEQ6 169 aa8.22□□□□□ -1.09
PSEN1-217ENST00000556533 CYP4F30PQ9H0H9 118 aa8.22□□□□□ -1.09
PSEN1-217ENST00000556533 MT1FP04733 61 aa8.21□□□□□ -1.1
PSEN1-217ENST00000556533 H0Y9P7 68 aa8.19□□□□□ -1.1
PSEN1-217ENST00000556533 LOC101927531A0A1B0GV80 90 aa8.18□□□□□ -1.1
PSEN1-217ENST00000556533 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
PSEN1-217ENST00000556533 CRCT1Q9UGL9 99 aa8.17□□□□□ -1.1
PSEN1-217ENST00000556533 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
PSEN1-217ENST00000556533 ATOX1O00244 68 aa8.15□□□□□ -1.1
PSEN1-217ENST00000556533 SCGB1A1P11684 91 aa8.12□□□□□ -1.11
PSEN1-217ENST00000556533 S4R3F8 94 aa8.12□□□□□ -1.11
PSEN1-217ENST00000556533 C5orf47Q569G3 176 aa8.11□□□□□ -1.11
PSEN1-217ENST00000556533 LINC00208Q96KT6 92 aa8.09□□□□□ -1.11
PSEN1-217ENST00000556533 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
PSEN1-217ENST00000556533 OCR1Q9BZK8 76 aa8.09□□□□□ -1.11
PSEN1-217ENST00000556533 MP68P56378 58 aa8.07□□□□□ -1.12
PSEN1-217ENST00000556533 LCA10Q71F78 164 aa8.05□□□□□ -1.12
PSEN1-217ENST00000556533 USH2AO75445 5202 aa8.04□□□□□ -1.12
PSEN1-217ENST00000556533 CSAG1Q6PB30 78 aa8.03□□□□□ -1.12
PSEN1-217ENST00000556533 FAM236AA0A1B0GUQ0 79 aa8.01□□□□□ -1.13
PSEN1-217ENST00000556533 FAM236BA0A1B0GV22 79 aa8.01□□□□□ -1.13
PSEN1-217ENST00000556533 LCE2BO14633 110 aa8.01□□□□□ -1.13
PSEN1-217ENST00000556533 KLKP1Q107X0 134 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms